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Domain combinations for 52540,_gap_,46894 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52540 - P-loop containing nucleoside triphosphate hydrolases
46894 - C-terminal effector domain of the bipartite response regulators

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Conexibacter_woesei_DSM_14684 6
Eggerthella_sp._YY7918 1
Eggerthella_lenta_DSM_2243 0
Coriobacterium_glomerans_PW2 0
Ilumatobacter_coccineus 4
Nakamurella_multipartita_DSM_44233 6
Modestobacter_marinus 8
Blastococcus_saxobsidens_DD2 3
Geodermatophilus_obscurus_DSM_43160 4
Kineococcus_radiotolerans_SRS30216 4
Catenulispora_acidiphila_DSM_44928 10
Stackebrandtia_nassauensis_DSM_44728 5
Frankia_symbiont_of_Datisca_glomerata 1
Frankia_sp._EAN1pec 2
Frankia_alni_ACN14a 0
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 2
Thermomonospora_curvata_DSM_43183 2
Streptosporangium_roseum_DSM_43021 7
Kitasatospora_setae_KM-6054 1
Streptomyces_coelicolor_A3(2) 7
Streptomyces_sp._PAMC26508 5
Streptomyces_flavogriseus_ATCC_33331 4
Streptomyces_sp._SirexAA-E 4
Streptomyces_griseus_subsp._griseus_NBRC_13350 2
Streptomyces_bingchenggensis_BCW-1 2
Streptomyces_violaceusniger_Tu_4113 5
Streptomyces_avermitilis_MA-4680 3
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 5
Streptomyces_scabiei_87.22 6
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 18
Actinosynnema_mirum_DSM_43827 6
Saccharomonospora_viridis_DSM_43017 2
Pseudonocardia_dioxanivorans_CB1190 6
Saccharopolyspora_erythraea_NRRL_2338 2
Amycolatopsis_mediterranei_U32 11
Kribbella_flavida_DSM_17836 7
Microlunatus_phosphovorus_NM-1 9
Salinispora_arenicola_CNS-205 2
Salinispora_tropica_CNB-440 1
Verrucosispora_maris_AB-18-032 3
Micromonospora_sp._L5 5
Micromonospora_aurantiaca_ATCC_27029 4
Actinoplanes_sp._N902-109 15
Actinoplanes_sp._SE50/110 6
Actinoplanes_missouriensis_431 18
Tsukamurella_paurometabola_DSM_20162 1
Gordonia_sp._KTR9 2
Gordonia_polyisoprenivorans_VH2 3
Gordonia_bronchialis_DSM_43247 1
Rhodococcus_jostii_RHA1 1
Rhodococcus_equi_103S 7
Rhodococcus_opacus_B4 2
Nocardia_cyriacigeorgica_GUH-2 7
Nocardia_farcinica_IFM_10152 5
Amycolicicoccus_subflavus_DQS3-9A1 1
Mycobacterium_abscessus_ATCC_19977 2
Mycobacterium_sp._JLS 3
Mycobacterium_intracellulare_ATCC_13950 3
Mycobacterium_avium_104 3
Mycobacterium_vanbaalenii_PYR-1 7
Mycobacterium_canettii_CIPT_140010059 1
Mycobacterium_africanum_GM041182 2
Mycobacterium_tuberculosis_KZN_1435 3
Mycobacterium_tuberculosis 2
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 2
Mycobacterium_rhodesiae_NBB3 2
Mycobacterium_gilvum_PYR-GCK 2
Mycobacterium_chubuense_NBB4 7
Mycobacterium_marinum_M 2
Mycobacterium_smegmatis_str._MC2_155 7
Mycobacterium_leprae_Br4923 0
Sanguibacter_keddieii_DSM_10542 6
Beutenbergia_cavernae_DSM_12333 5
Leifsonia_xyli_subsp._xyli_str._CTCB07 2
Microbacterium_testaceum_StLB037 4
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 1
Intrasporangium_calvum_DSM_43043 2
Xylanimonas_cellulosilytica_DSM_15894 4
Cellulomonas_flavigena_DSM_20109 1
Cellulomonas_fimi_ATCC_484 2
Arthrobacter_phenanthrenivorans_Sphe3 2
Arthrobacter_chlorophenolicus_A6 4
Arthrobacter_aurescens_TC1 5
Arthrobacter_arilaitensis_Re117 2
Arthrobacter_sp._Rue61a 4
Arthrobacter_sp._FB24 4
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1
Herpetosiphon_aurantiacus_DSM_785 0
Chloroflexus_aggregans_DSM_9485 1
Deinococcus_gobiensis_I-0 1
Ethanoligenens_harbinense_YUAN-3 2
Desulfosporosinus_orientis_DSM_765 3
Syntrophobotulus_glycolicus_DSM_8271 1
Desulfotomaculum_acetoxidans_DSM_771 1
Acetobacterium_woodii_DSM_1030 1
Clostridium_saccharolyticum_WM1 1
[Ruminococcus]_obeum 1
Coprococcus_sp._ART55/1 1
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 2
Clostridium_ljungdahlii_DSM_13528 1
Clostridium_beijerinckii_NCIMB_8052 1
Clostridium_cellulovorans_743B 1
Paenibacillus_sp._JDR-2 1
Paenibacillus_mucilaginosus_3016 1
Halobacillus_halophilus_DSM_2266 1
Fretibacterium_fastidiosum 1
Spirochaeta_smaragdinae_DSM_11293 1
Treponema_azotonutricium_ZAS-9 1
Treponema_primitia_ZAS-2 2
Candidatus_Solibacter_usitatus_Ellin6076 2
Desulfobacterium_autotrophicum_HRM2 0
Desulfohalobium_retbaense_DSM_5692 0
Haliangium_ochraceum_DSM_14365 1
Corallococcus_coralloides_DSM_2259 1
Azoarcus_sp._KH32C 4
Pseudogulbenkiania_sp._NH8B 1
Methylibium_petroleiphilum_PM1 3
Rubrivivax_gelatinosus_IL144 1
Leptothrix_cholodnii_SP-6 1
Burkholderia_phytofirmans_PsJN 1
Burkholderia_phymatum_STM815 1
Ralstonia_eutropha_JMP134 2
Cupriavidus_metallidurans_CH34 4
Cupriavidus_necator_N-1 5
Ralstonia_eutropha_H16 2
Burkholderia_pseudomallei_1106a 1
Burkholderia_mallei_SAVP1 1
Burkholderia_ambifaria_AMMD 1
Burkholderia_cenocepacia_HI2424 1
Verminephrobacter_eiseniae_EF01-2 1
Alicycliphilus_denitrificans_K601 1
Variovorax_paradoxus_S110 1
Sphingobium_chlorophenolicum_L-1 1
Sphingomonas_wittichii_RW1 5
Hirschia_baltica_ATCC_49814 1
Azospirillum_sp._B510 1
Rhizobium_leguminosarum_bv._viciae_3841 1
Agrobacterium_radiobacter_K84 1
Glaciecola_sp._4H-3-7+YE-5 1
Marinobacter_hydrocarbonoclasticus_ATCC_49840 1
Hahella_chejuensis_KCTC_2396 2
Halomonas_elongata_DSM_2581 1
Frateuria_aurantia_DSM_6220 1
Klebsiella_oxytoca_E718 1
Klebsiella_variicola_At-22 1
Klebsiella_pneumoniae_NTUH-K2044 1
Pseudomonas_sp._UW4 1
Pseudomonas_fluorescens_SBW25 1
Pseudomonas_mendocina_ymp 2
Pseudomonas_aeruginosa_UCBPP-PA14 2
Psychrobacter_arcticus_273-4 1

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Strains
Genome     Number
Frankia_sp._EuI1c 9
Frankia_sp._CcI3 1
Nocardiopsis_alba_ATCC_BAA-2165 1
Streptomyces_albus_J1074 4
Streptomyces_rapamycinicus_NRRL_5491 6
Streptomyces_davawensis_JCM_4913 10
Streptomyces_fulvissimus_DSM_40593 3
Streptomyces_venezuelae_ATCC_10712 4
Streptomyces_collinus_Tu_365 4
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 5
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 16
Saccharothrix_espanaensis_DSM_44229 7
Amycolatopsis_mediterranei_RB 11
Amycolatopsis_mediterranei_S699 11
Amycolatopsis_mediterranei_S699 11
Amycolatopsis_orientalis_HCCB10007 9
Actinoplanes_friuliensis_DSM_7358 10
Rhodococcus_pyridinivorans_SB3094 2
Rhodococcus_erythropolis_CCM2595 1
Nocardia_brasiliensis_ATCC_700358 6
Mycobacterium_sp._MOTT36Y 5
Mycobacterium_sp._JDM601 2
Mycobacterium_abscessus_subsp._bolletii_50594 2
Mycobacterium_liflandii_128FXT 1
Mycobacterium_sp._KMS 2
Mycobacterium_sp._MCS 2
Mycobacterium_yongonense_05-1390 5
Mycobacterium_intracellulare_MOTT-64 5
Mycobacterium_indicus_pranii_MTCC_9506 7
Mycobacterium_intracellulare_MOTT-02 4
Mycobacterium_avium_subsp._paratuberculosis_MAP4 2
Mycobacterium_avium_subsp._paratuberculosis_K-10 2
Mycobacterium_canettii_CIPT_140070017 1
Mycobacterium_canettii_CIPT_140060008 1
Mycobacterium_canettii_CIPT_140070008 1
Mycobacterium_canettii_CIPT_140070010 1
Mycobacterium_tuberculosis_EAI5/NITR206 2
Mycobacterium_tuberculosis_EAI5 1
Mycobacterium_tuberculosis_str._Beijing/NITR203 2
Mycobacterium_tuberculosis_UT205 2
Mycobacterium_tuberculosis_RGTB423 2
Mycobacterium_tuberculosis_CTRI-2 3
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 2
Mycobacterium_tuberculosis_KZN_605 3
Mycobacterium_tuberculosis_KZN_4207 3
Mycobacterium_tuberculosis_CCDC5180 2
Mycobacterium_tuberculosis_CCDC5079 2
Mycobacterium_tuberculosis_CCDC5079 2
Mycobacterium_tuberculosis_H37Ra 2
Mycobacterium_tuberculosis_str._Haarlem 2
Mycobacterium_tuberculosis_F11 3
Mycobacterium_tuberculosis_H37Rv 2
Mycobacterium_tuberculosis_CDC1551 2
Mycobacterium_bovis_AF2122/97 2
Mycobacterium_bovis_BCG_str._Korea_1168P 2
Mycobacterium_bovis_BCG_str._Mexico 2
Mycobacterium_bovis_BCG_str._Tokyo_172 2
Mycobacterium_gilvum_Spyr1 4
Mycobacterium_smegmatis_str._MC2_155 7
Mycobacterium_leprae_TN 0
Mycobacterium_kansasii_ATCC_12478 1
Corynebacterium_callunae_DSM_20147 1
Leifsonia_xyli_subsp._cynodontis_DSM_46306 3
Clavibacter_michiganensis_subsp._sepedonicus 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1
Desulfosporosinus_meridiei_DSM_13257 1
Clostridium_sp._SY8519 1
Clostridium_autoethanogenum_DSM_10061 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1
Paenibacillus_mucilaginosus_KNP414 2
Paenibacillus_mucilaginosus_K02 2
Paenibacillus_larvae_subsp._larvae_DSM_25430 1
Desulfovibrio_vulgaris_str._'Miyazaki_F' 1
Ralstonia_pickettii_12J 0
Burkholderia_sp._YI23 2
Burkholderia_sp._CCGE1003 1
Burkholderia_sp._CCGE1001 1
Burkholderia_pseudomallei_MSHR305 1
Burkholderia_pseudomallei_NCTC_13179 1
Burkholderia_pseudomallei_BPC006 1
Burkholderia_pseudomallei_1026b 1
Burkholderia_pseudomallei_1710b 1
Burkholderia_pseudomallei_K96243 1
Burkholderia_mallei_NCTC_10229 1
Burkholderia_mallei_NCTC_10247 1
Burkholderia_mallei_ATCC_23344 1
Burkholderia_lata 3
Burkholderia_ambifaria_MC40-6 1
Burkholderia_cenocepacia_MC0-3 1
Burkholderia_cenocepacia_AU_1054 1
Burkholderia_cenocepacia_J2315 2
Burkholderia_cepacia_GG4 4
Variovorax_paradoxus_B4 2
Variovorax_paradoxus_EPS 1
Rhizobium_leguminosarum_bv._trifolii_WSM2304 1
Bradyrhizobium_oligotrophicum_S58 2
Raoultella_ornithinolytica_B6 1
Klebsiella_oxytoca_KCTC_1686 1
Klebsiella_pneumoniae_JM45 1
Klebsiella_pneumoniae_CG43 1
Klebsiella_pneumoniae_342 1
Klebsiella_pneumoniae_subsp._pneumoniae_1084 1
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1
Pseudomonas_denitrificans_ATCC_13867 3
Pseudomonas_stutzeri_RCH2 1
Pseudomonas_poae_RE*1-1-14 1
Pseudomonas_resinovorans_NBRC_106553 0
Pseudomonas_mendocina_NK-01 2
Pseudomonas_aeruginosa_SCV20265 2
Pseudomonas_aeruginosa_MTB-1 2
Pseudomonas_aeruginosa_LES431 2
Pseudomonas_aeruginosa_RP73 2
Pseudomonas_aeruginosa_B136-33 2
Pseudomonas_aeruginosa_PA1R 4
Pseudomonas_aeruginosa_PA1 4
Pseudomonas_aeruginosa_DK2 2
Pseudomonas_aeruginosa_NCGM2.S1 2
Pseudomonas_aeruginosa_M18 2
Pseudomonas_aeruginosa_LESB58 2
Pseudomonas_aeruginosa_PA7 1
Pseudomonas_aeruginosa_PAO1 2

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Others
Genome     Number
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 2
NCBI_plasmid_sequences_(Plasmids) 21
STRING_v9.0.5_(STRING) 209
Uniprot_2018_03_genome 44478
NCBI_2017_08_genome 35067
TargetDB__(Targets) 1

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