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  Home > SCOP hierarchy > Domain combination - 52738,47757,53335,57997,55785,55785,_gap_

Domain combinations for 52738,47757,53335,57997,55785,55785,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52738 - Methylesterase CheB, C-terminal domain
47757 - Chemotaxis receptor methyltransferase CheR, N-terminal domain
53335 - S-adenosyl-L-methionine-dependent methyltransferases
57997 - Tropomyosin
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Beijerinckia_indica_subsp._indica_ATCC_9039 1

Strains
Genome     Number
Xanthomonas_citri_subsp._citri_Aw12879 1

Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 1
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 1134
NCBI_2017_08_genome 123

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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