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Home > SCOP hierarchy > Domain combination - 52833,52833,52833,52833,_gap_

Domain combinations for 52833,52833,52833,52833,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52833 - Thioredoxin-like
52833 - Thioredoxin-like
52833 - Thioredoxin-like
52833 - Thioredoxin-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 2

Pan_troglodytes_76_2.1.4 (Chimpanzee) 2

Pongo_abelii_76_2 (Sumatran orangutan) 1

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 2

Papio_anubis_76 (Olive baboon) 2

Macaca_mulatta_76_1 (Rhesus monkey) 3

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 6

Otolemur_garnettii_76_3 (Small-eared galago) 2

Microcebus_murinus_76_1 (Gray mouse lemur) 1

Rattus_norvegicus_76_5.0 (Norway rat) 2

Mus_musculus_76_38 (House mouse) 2

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 1

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 2

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 3

Cavia_porcellus_76_3 (Domestic guinea pig) 1

Oryctolagus_cuniculus_76_2 (Rabbit) 0

Ochotona_princeps_76 (American pika) 1

Tupaia_belangeri_76 (Northern tree shrew) 1

Sus_scrofa_76_10.2 (Pig) 2

Bos_taurus_76_3.1 (Cattle) 2

Ovis_aries_76_3.1 (Sheep) 2

Vicugna_pacos_76_1 (Alpaca) 1

Tursiops_truncatus_76_1 (Bottlenose dolphin) 2

Mustela_putorius_furo_76_1.0 (Domestic ferret) 2

Ailuropoda_melanoleuca_76_1 (Giant panda) 2

Canis_familiaris_76_3.1 (Dog) 2

Felis_catus_76_6.2 (Domestic cat) 2

Equus_caballus_76_2 (Horse) 4

Myotis_lucifugus_76_2.0 (Little brown bat) 2

Pteropus_vampyrus_76_1 (Large flying fox) 1

Sorex_araneus_76_1 (European shrew) 1

Procavia_capensis_76_1 (Cape rock hyrax) 1

Loxodonta_africana_76_3 (African savanna elephant) 3

Echinops_telfairi_76 (Small Madagascar hedgehog) 1

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 2

Macropus_eugenii_76_1.0 (Tammar wallaby) 1

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 1

Monodelphis_domestica_76_5 (Gray short-tailed opossum) 1

Ornithorhynchus_anatinus_76_5 (Platypus) 1

Saccoglossus_kowalevskii_v3.0 1

Petromyzon_marinus_76_7.0 (Sea lamprey) 1

Meleagris_gallopavo_76_2 (Turkey) 1

Gallus_gallus_76_4 (Chicken) 1

Anas_platyrhynchos_76_1.0 (Mallard) 2

Taeniopygia_guttata_76_3.2.4 (Zebra finch) 2

Ficedula_albicollis_76_1.0 (Collared flycatcher) 1

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 1

Xenopus_laevis_ (African clawed frog) 2

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 2

Latimeria_chalumnae_76_1 (Coelacanth) 2

Lepisosteus_oculatus_76 (Spotted gar) 2

Gadus_morhua_76_1 (Atlantic cod) 1

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 1

Takifugu_rubripes_76_4 (Torafugu) 4

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 2

Oryzias_latipes_76_1 (Japanese medaka) 1

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 1

Poecilia_formosa_76 (Amazon molly) 1

Oreochromis_niloticus_76_1.0 (Nile tilapia) 2

Astyanax_mexicanus_76 (Mexican tetra) 1

Adineta_vaga 4

Crassostrea_gigas_22 (Pacific oyster) 1

Lottia_gigantea_ (Owl limpet) 1

Helobdella_robusta_ 1

Capitella_sp._I_ 1

Danaus_plexippus_OGS1.0 (Monarch butterfly) 0

Heliconius_melpomene_ (Postman butterfly) 0

Bombyx_mori_ (Domestic silkworm) 0

Nasonia_vitripennis_ (Jewel wasp) 0

Apis_mellifera_38.2d_(Not_maintained) (Honey bee) 4

Harpegnathos_saltator_v3.3 (Jerdon's jumping ant) 1

Linepithema_humile_v1.1 (Argentine ant) 1

Pogonomyrmex_barbatus_v1.2 (Red harvester ant) 1

Solenopsis_invicta_v.2.2.3 (Red fire ant) 1

Acromyrmex_echinatior_v3.8 (Panamanian leafcutter ant) 0

Atta_cephalotes_v1.1 0

Camponotus_floridanus_v3.3 (Florida carpenter ant) 1

Lucilia_cuprina (Australian sheep blowfly) 0

Drosophila_grimshawi_1.3 0

Drosophila_willistoni_1.3 0

Drosophila_pseudoobscura_2.13 0

Drosophila_persimilis_1.3 0

Drosophila_suzukii 0

Drosophila_yakuba_1.3 0

Drosophila_sechellia_1.3 0

Drosophila_melanogaster_76_5 (Fruit fly) 0

Drosophila_erecta_1.3 0

Drosophila_ananassae_1.3 0

Drosophila_virilis_1.2 0

Drosophila_mojavensis_1.3 0

Aedes_aegypti_55_(Not_maintained) (Yellow fever mosquito) 1

Culex_pipiens_quinquefasciatus_ (Southern house mosquito) 1

Anopheles_darlingi_22 (American malaria mosquito) 1

Anopheles_gambiae_49_3j (African malaria mosquito) 3

Tribolium_castaneum_3.0 (Red flour beetle) 3

Pediculus_humanus_corporis__(Early_assembly) (Human body louse) 0

Acyrthosiphon_pisum_ (Pea aphid) 1

Daphnia_pulex_ (Common water flea) 1

Strigamia_maritima_22 1

Sarcoptes_scabiei 2

Tetranychus_urticae_ (Two-spotted spider mite) 1

Ixodes_scapularis__(Preliminary) (Black-legged tick) 1

Meloidogyne_incognita_ (Southern root-knot nematode) 2

Onchocerca_volvulus_22 1

Caenorhabditis_japonica_ 1

Caenorhabditis_briggsae_2 1

Hymenolepis_microstoma_ 1

Mnemiopsis_leidyi (Sea walnut) 1

Nematostella_vectensis_1.0 (Starlet sea anemone) 1

Hydra_vulgaris 1

Amphimedon_queenslandica 1

Trichoplax_adhaerens_ 1

Conidiobolus_coronatus_NRRL28638_v1.0 1

Mortierella_verticillata_NRRL_6337_ 1

Phycomyces_blakesleeanus_ 1

Rhizopus_oryzae_RA_99-880_ 2

Mucor_circinelloides_ 3

Rhizomucor_miehei_CAU432_ 1

Mixia_osmundae_IAM_14324_v1.0 1

Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1

Microbotryum_violaceum_22 1

Wallemia_sebi_v1.0 1

Sphaerobolus_stellatus_v1.0 1

Serpula_lacrymans_var._lacrymans_S7.9_ 1

Coprinopsis_cinerea_okayama7_130_v3 1

Pleurotus_ostreatus_ (Oyster mushroom) 1

Amanita_thiersii_Skay4041_v1.0 1

Amanita_muscaria_Koide_v1.0 (Fly agaric) 1

Galerina_marginata_v1.0 1

Hebeloma_cylindrosporum_h7_v2.0 1

Laccaria_bicolor_S238N-H82_ 1

Schizophyllum_commune_ 1

Gloeophyllum_trabeumv1.0 1

Punctularia_strigosozonata_v1.0 1

Sebacina_vermifera_MAFF_305830_v1.0 1

Fomitiporia_mediterranea_v1.0 1

Postia_placenta_ 1

Fomitopsis_pinicolav1.0 1

Fomitopsis_pinicola_FP-58527_SS1_v3.0 1

Phanerochaete_chrysosporium_RP-78_2.1 1

Apiospora_montagnei_NRRL_25634_v1.0 1

Magnaporthe_poae_ATCC_64411_22 1

Magnaporthe_grisea_70-15_ 1

Sporotrichum_thermophile_ATCC_42464_ 1

Thielavia_terrestris_NRRL_8126_ 1

Chaetomium_globosum_CBS_148.51_ 1

Neurospora_tetrasperma_ 1

Neurospora_discreta_FGSC_8579_ 1

Neurospora_crassa_OR74A_ 1

Cryphonectria_parasitica_ (Chestnut blight fungus) 1

Verticillium_albo-atrum_VaMs.102_ 1

Glomerella_graminicola_22 1

Fusarium_graminearum_ 1

Nectria_haematococca_mpVI_ 0

Fusarium_oxysporum_f._sp._lycopersici_4286_ 1

Fusarium_verticillioides_7600_ 1

Trichoderma_asperellum_CBS_433.97_v1.0 1

Trichoderma_atroviride_ 1

Trichoderma_citrinoviride_v1.0 1

Trichoderma_reesei_1.2 1

Trichoderma_virens_Gv29-8_ 0

Trichoderma_longibrachiatum_ATCC_18648_v1.0 1

Trichoderma_harzianum_CBS_226.95_v1.0 1

Amorphotheca_resinae_v1.0 (Creosote fungus) 1

Botrytis_cinerea_B05.10_ 1

Sclerotinia_sclerotiorum_ 1

Blumeria_graminis_22 1

Didymella_exigua_CBS_183.55_v1.0 1

Cochliobolus_victoriae_FI3_v1.0 1

Cochliobolus_carbonum_26-R-13_v1.0 1

Cochliobolus_heterostrophus_ (Southern corn leaf blight pathogen) 1

Alternaria_brassicicola_ 1

Pyrenophora_teres_f._teres_22 1

Pyrenophora_tritici-repentis_ 1

Stagonospora_nodorum_ 2

Septoria_musiva_v1.0 1

Mycosphaerella_fijiensis_CIRAD86_ 1

Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1

Coccidioides_posadasii_RMSCC_3488_ 1

Coccidioides_immitis_RS_ 1

Ajellomyces_dermatitidis_SLH14081_ 1

Aspergillus_zonatus_v1.0 1

Penicillium_chrysogenum_Wisconsin_54-1255_ 1

Penicillium_chrysogenum_v1.0 1

Aspergillus_acidus_v1.0 1

Aspergillus_fumigatus_Af293 1

Aspergillus_brasiliensis_v1.0 1

Aspergillus_nidulans_FGSC_A4_ 1

Aspergillus_sydowii_v1.0 1

Aspergillus_versicolor_v1.0 1

Aspergillus_glaucus 1

Aspergillus_carbonarius_ITEM_5010_ 1

Neosartorya_fischeri_NRRL_181_ 1

Aspergillus_terreus_NIH2624_ 1

Aspergillus_tubingensis_v1.0 1

Aspergillus_wentii_v1.0 1

Aspergillus_niger_22 1

Aspergillus_clavatus_NRRL_1_ 1

Penicillium_marneffei_ATCC_18224_ 1

Tuber_melanosporum_Mel28_22 1

Tuber_melanosporum_Vittad_ (Perigord truffle) 1

Dekkera_bruxellensis_CBS_2499_v2.0 1

Candida_tanzawaensis_NRRL_Y-17324__v1.0 1

Candida_dubliniensis_CD36_ 1

Candida_tropicalis_MYA-3404_ 1

Candida_parapsilosis_ 1

Candida_albicans_SC5314 1

Lodderomyces_elongisporus_NRRL_YB-4239_ 1

Pichia_stipitis_CBS_6054_ 1

Candida_guilliermondii_ATCC_6260_ 1

Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1

Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1

Yarrowia_lipolytica_CLIB122 1

Candida_lusitaniae_ATCC_42720_ 1

Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1

Vanderwaltozyma_polyspora_DSM_70294_ 2

Kluyveromyces_thermotolerans_CBS_6340 1

Ashbya_gossypii_ATCC_10895_ 1

Saccharomyces_mikatae_MIT 1

Saccharomyces_cerevisiae_76 (Baker's yeast) 1

Schizosaccharomyces_cryophilus_OY26_22 1

Schizosaccharomyces_octosporus_yFS286_ 1

Schizosaccharomyces_japonicus_yFS275_ 1

Schizosaccharomyces_pombe (Fission yeast) 1

Allomyces_macrogynus_ATCC_38327_ 3

Spizellomyces_punctatus_DAOM_BR117_ 1

Dictyostelium_purpureum_ 1

Selaginella_moellendorffii_ 1

Pinus_taeda (Loblolly pine) 0

Picea_abies (Norway spruce) 0

Theobroma_cacao_B97-61/B2_v1 (Cacao) 1

Citrus_sinensis_v154 (Sweet orange) 2

Thellungiella_halophila_v173 2

Brassica_rapa_Chiifu-401_1.2 (Field mustard) 5

Capsella_rubella_v183 1

Arabidopsis_lyrata_ (Lyrate rockcress) 2

Arabidopsis_thaliana_10 (Thale cress) 2

Carica_papaya_ (Papaya) 1

Medicago_truncatula_ (Barrel medic) 1

Phaseolus_vulgaris_v186 (French bean) 2

Glycine_max_v109 (Soybean) 2

Cucumis_sativus_v122 (Cucumber) 1

Fragaria_vesca_ (Wild strawberry) 1

Malus_domestica_v196 (Apple) 3

Prunus_persica_v139 (Peach) 1

Linum_usitatissimum_v200 (Flax) 1

Manihot_esculenta_v147 (Cassava) 1

Populus_trichocarpa_v156 (Black cottonwood) 1

Mimulus_guttatus_v140 (Spotted monkey flower) 2

Solanum_lycopersicum_v.2.3 (Tomato) 3

Solanum_tuberosum_ (Potato) 2

Triticum_urartu_22 1

Triticum_aestivum_22 (Bread wheat) 2

Aegilops_tauschii_22 2

Brachypodium_distachyon_ (Stiff brome) 3

Oryza_barthii_22 (African wild rice) 2

Oryza_meridionalis_22 3

Oryza_glumaepatula_22 2

Oryza_glaberrima (African rice) 2

Oryza_punctata_22 4

Oryza_nivara_22 4

Oryza_brachyantha_22 (Malo sina) 2

Oryza_sativa_ssp._japonica_5.0 (Japanese rice) 3

Oryza_sativa_v193 (Rice) 3

Phyllostachys_heterocyclavar._pubescens (Kikko-chiku) 2

Panicum_virgatum_v202 (Switchgrass) 2

Setaria_italica_v164 (Foxtail millet) 2

Zea_mays_subsp._mays_ (Maize) 3

Zea_mays_v181 (Maize) 3

Sorghum_bicolor_ (Sorghum) 0

Musa_balbisiana (Balbis banana) 2

Musa_acuminata_22 (Wild Malaysian banana) 2

Amborella_trichopoda_22 1

Physcomitrella_patens 2

Ostreococcus_tauri_ 1

Thecamonas_trahens_ATCC_50062_ 1

Leishmania_major_strain_Friedlin_ 1

Trypanosoma_vivax_ 1

Trypanosoma_congolense_2.4 1

Trypanosoma_brucei_gambiense_v4.1 1

Trypanosoma_brucei_TREU927_v4.1 1

Ectocarpus_siliculosus 0

Albugo_laibachii_22 1

Pythium_iwayamai_DAOM_BR242034_22 1

Pythium_aphanidermatum_DAOM_BR444_22 0

Pythium_vexans_DAOM_BR484_22 1

Phytophthora_sojae_1.1 1

Ichthyophthirius_multifiliis_strain_G5_ 2

Guillardia_theta_CCMP2712_v1.0_ 2

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Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 2

Pan_troglodytes_69_2.1.4 (Chimpanzee) 2

Pongo_abelii_69_2 (Sumatran orangutan) 1

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 2

Macaca_mulatta_69_1 (Rhesus monkey) 2

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 2

Otolemur_garnettii_69_3 (Small-eared galago) 2

Microcebus_murinus_69_1 (Gray mouse lemur) 1

Rattus_norvegicus_69_3.4 (Norway rat) 2

Mus_musculus_69_38 (House mouse) 2

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 1

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 2

Cavia_porcellus_69_3 (Domestic guinea pig) 1

Oryctolagus_cuniculus_69_2 (Rabbit) 2

Ochotona_princeps_69 (American pika) 1

Tupaia_belangeri_69 (Northern tree shrew) 1

Sus_scrofa_69_10.2 (Pig) 2

Bos_taurus_69_3.1 (Cattle) 2

Vicugna_pacos_69_1 (Alpaca) 1

Tursiops_truncatus_69_1 (Bottlenose dolphin) 2

Mustela_putorius_furo_69_1.0 (Domestic ferret) 2

Ailuropoda_melanoleuca_69_1 (Giant panda) 2

Canis_familiaris_69_3.1 (Dog) 2

Felis_catus_69 (Domestic cat) 1

Equus_caballus_69_2 (Horse) 4

Myotis_lucifugus_69_2.0 (Little brown bat) 2

Pteropus_vampyrus_69_1 (Large flying fox) 1

Sorex_araneus_69_1 (European shrew) 1

Procavia_capensis_69_1 (Cape rock hyrax) 1

Loxodonta_africana_69_3 (African savanna elephant) 2

Echinops_telfairi_69 (Small Madagascar hedgehog) 1

Macropus_eugenii_69_1.0 (Tammar wallaby) 1

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 1

Monodelphis_domestica_69_5 (Gray short-tailed opossum) 1

Ornithorhynchus_anatinus_69_5 (Platypus) 1

Petromyzon_marinus_69_7.0 (Sea lamprey) 1

Meleagris_gallopavo_69_2 (Turkey) 1

Gallus_gallus_69_2 (Chicken) 1

Taeniopygia_guttata_69_3.2.4 (Zebra finch) 2

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 1

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 1

Latimeria_chalumnae_69_1 (Coelacanth) 2

Gadus_morhua_69_1 (Atlantic cod) 1

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 1

Takifugu_rubripes_69_4 (Torafugu) 2

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 2

Oryzias_latipes_69_1 (Japanese medaka) 1

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 1

Drosophila_melanogaster_69_5 (Fruit fly) 0

Saccharomyces_cerevisiae_69_4 (Baker's yeast) 1

Arabidopsis_thaliana_10 (Thale cress) 2

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Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 3

Homo_sapiens__(NCBI_version) (Human) 2

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 2

Lotus_japonicus__(Early_assembly) 1

Malus_x_domestica_(Duplicate) (Apple) 3

Ricinus_communis__(Early_assembly) (Castor bean) 1

Nicotiana_benthamiana_0.4.4_(Early_draft) 3

Solanum_pimpinellifolium_A-1.0_(Early_draft) (Currant tomato) 3

Solanum_lycopersicum_v2.3_(Early_assembly) (Tomato) 3

Phoenix_dactylifera__(Early_draft) (Date palm) 2

NCBI_2017_08_genome 789

Protozoadb_2010_08_(Protozoadb) 3

Uniprot_2018_03_genome 10656

TargetDB__(Targets) 3

Core_Eukaryotic_Genes_458_(CEGMA) 2

Protein_Data_Bank_(all_PDB_sequenc) 1

STRING_v9.0.5_(STRING) 94

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Domain combinations for 52833,52833,52833,52833,_gap_ superfamilies in groups of genomes