SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for 53300,49265,49265,49265,_gap_,49265,49265,49265,53300,49899,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

53300 - vWA-like
49265 - Fibronectin type III
49265 - Fibronectin type III
49265 - Fibronectin type III
49265 - Fibronectin type III
49265 - Fibronectin type III
49265 - Fibronectin type III
53300 - vWA-like
49899 - Concanavalin A-like lectins/glucanases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Ovis_aries_76_3.1   (Sheep)   0
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Equus_caballus_76_2   (Horse)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Loxodonta_africana_76_3   (African savanna elephant)   0
Meleagris_gallopavo_76_2   (Turkey)   0
Gallus_gallus_76_4   (Chicken)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_76_2.0   (Green anole)   0
Latimeria_chalumnae_76_1   (Coelacanth)   1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   2
Takifugu_rubripes_76_4   (Torafugu)   1
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   0
Oryzias_latipes_76_1   (Japanese medaka)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1

Longest transcript per gene
Genome     Number
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Equus_caballus_69_2   (Horse)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Loxodonta_africana_69_3   (African savanna elephant)   0
Meleagris_gallopavo_69_2   (Turkey)   0
Gallus_gallus_69_2   (Chicken)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_69_2.0   (Green anole)   0
Latimeria_chalumnae_69_1   (Coelacanth)   1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1
Takifugu_rubripes_69_4   (Torafugu)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   0
Oryzias_latipes_69_1   (Japanese medaka)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 3
Uniprot_2018_03_genome 495
NCBI_2017_08_genome 17

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]