SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 53300,53300,53300,57196 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

53300 - vWA-like
53300 - vWA-like
53300 - vWA-like
57196 - EGF/Laminin

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Pongo_abelii_76_2   (Sumatran orangutan)   1
Equus_caballus_76_2   (Horse)   1
Erinaceus_europaeus_76   (Western European hedgehog)   1
Macropus_eugenii_76_1.0   (Tammar wallaby)   1
Crassostrea_gigas_22   (Pacific oyster)   0
Lottia_gigantea_   (Owl limpet)   0
Helobdella_robusta_ 0
Capitella_sp._I_ 0
Nematostella_vectensis_1.0   (Starlet sea anemone)   0

Longest transcript per gene
Genome     Number
Pongo_abelii_69_2   (Sumatran orangutan)   1
Equus_caballus_69_2   (Horse)   1
Erinaceus_europaeus_69   (Western European hedgehog)   1
Macropus_eugenii_69_1.0   (Tammar wallaby)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 2
Uniprot_2018_03_genome 49
NCBI_2017_08_genome 8

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