SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 53448,53448,50370 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

53448 - Nucleotide-diphospho-sugar transferases
53448 - Nucleotide-diphospho-sugar transferases
50370 - Ricin B-like lectins

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   1
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Ochotona_princeps_76   (American pika)   1
Tupaia_belangeri_76   (Northern tree shrew)   0
Vicugna_pacos_76_1   (Alpaca)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Sorex_araneus_76_1   (European shrew)   0
Erinaceus_europaeus_76   (Western European hedgehog)   0
Procavia_capensis_76_1   (Cape rock hyrax)   0
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1
Gadus_morhua_76_1   (Atlantic cod)   0
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1
Danaus_plexippus_OGS1.0   (Monarch butterfly)   0
Lucilia_cuprina   (Australian sheep blowfly)   0
Drosophila_willistoni_1.3 0
Drosophila_suzukii 0
Drosophila_yakuba_1.3 0
Drosophila_simulans_1.3 1
Drosophila_ananassae_1.3 0
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   0
Anopheles_darlingi_22   (American malaria mosquito)   1
Rhodnius_prolixus_22 2
Strigamia_maritima_22 0
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   1

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Longest transcript per gene
Genome     Number
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Ochotona_princeps_69   (American pika)   1
Tupaia_belangeri_69   (Northern tree shrew)   0
Vicugna_pacos_69_1   (Alpaca)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   0
Felis_catus_69   (Domestic cat)   1
Pteropus_vampyrus_69_1   (Large flying fox)   0
Sorex_araneus_69_1   (European shrew)   0
Erinaceus_europaeus_69   (Western European hedgehog)   0
Procavia_capensis_69_1   (Cape rock hyrax)   0
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1
Gadus_morhua_69_1   (Atlantic cod)   0

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   2
STRING_v9.0.5_(STRING) 3
NCBI_2017_08_genome 4
Uniprot_2018_03_genome 95

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