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Domain combinations for 54236,_gap_,46934,101238,46934 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54236 - Ubiquitin-like
46934 - UBA-like
101238 - XPC-binding domain
46934 - UBA-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   1
Macropus_eugenii_76_1.0   (Tammar wallaby)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Ornithorhynchus_anatinus_76_5   (Platypus)   1
Gallus_gallus_76_4   (Chicken)   1
Anas_platyrhynchos_76_1.0   (Mallard)   1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Anolis_carolinensis_76_2.0   (Green anole)   1
Takifugu_rubripes_76_4   (Torafugu)   2
Oryzias_latipes_76_1   (Japanese medaka)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1
Astyanax_mexicanus_76   (Mexican tetra)   1
Nasonia_vitripennis_   (Jewel wasp)   1
Lucilia_cuprina   (Australian sheep blowfly)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   1
Trichinella_spiralis_22 0
Dictyostelium_discoideum 1
Actinidia_chinensis_Hongyang_ 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1
Toxoplasma_gondii_VEG 1
Toxoplasma_gondii_ME49 1
Trichomonas_vaginalis_ 1

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Longest transcript per gene
Genome     Number
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1
Macropus_eugenii_69_1.0   (Tammar wallaby)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Ornithorhynchus_anatinus_69_5   (Platypus)   1
Gallus_gallus_69_2   (Chicken)   1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1
Anolis_carolinensis_69_2.0   (Green anole)   1

Others
Genome     Number
Uniprot_2018_03_genome 1820
Protozoadb_2010_08_(Protozoadb) 4
STRING_v9.0.5_(STRING) 12
NCBI_2017_08_genome 112

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