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Domain combinations for 54495,_gap_,56112,_gap_,56112,55681,52954,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54495 - UBC-like
56112 - Protein kinase-like (PK-like)
56112 - Protein kinase-like (PK-like)
55681 - Class II aaRS and biotin synthetases
52954 - Class II aaRS ABD-related

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Bos_taurus_76_3.1   (Cattle)   1
Gadus_morhua_76_1   (Atlantic cod)   1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1
Takifugu_rubripes_76_4   (Torafugu)   1
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1
Poecilia_formosa_76   (Amazon molly)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   2
Tribolium_castaneum_3.0   (Red flour beetle)   1
Acropora_digitifera_v1.0 1
Phycomyces_blakesleeanus_ 1
Rhizomucor_miehei_CAU432_ 1
Mixia_osmundae_IAM_14324_v1.0 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1
Microbotryum_violaceum_22 1
Sebacina_vermifera_MAFF_305830_v1.0 1
Coccidioides_posadasii_RMSCC_3488_ 1
Coccidioides_immitis_RS_ 1
Ajellomyces_dermatitidis_SLH14081_ 1
Aspergillus_versicolor_v1.0 1
Aspergillus_glaucus 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1
Schizosaccharomyces_japonicus_yFS275_ 1
Allomyces_macrogynus_ATCC_38327_ 1
Spizellomyces_punctatus_DAOM_BR117_ 1
Dictyostelium_purpureum_ 1

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Strains
Genome     Number
Cryptococcus_neoformans_var._grubii_H99_ 1
Paracoccidioides_brasiliensis_Pb01_ 1
Coccidioides_posadasii_str._Silveira_ 1
Coccidioides_immitis_RMSCC_2394_ 1
Ajellomyces_dermatitidis_ER-3_ 1
Histoplasma_capsulatum_H143 1
Histoplasma_capsulatum_H88 1
Histoplasma_capsulatum_G186AR 1

Longest transcript per gene
Genome     Number
Bos_taurus_69_3.1   (Cattle)   1
Gadus_morhua_69_1   (Atlantic cod)   1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1
Takifugu_rubripes_69_4   (Torafugu)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 5
NCBI_2017_08_genome 114
Uniprot_2018_03_genome 4352

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