SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 55008,_gap_,81653,81665,56784 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55008 - HMA, heavy metal-associated domain
81653 - Calcium ATPase, transduction domain A
81665 - Calcium ATPase, transmembrane domain M
56784 - HAD-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Pongo_abelii_76_2   (Sumatran orangutan)   0
Papio_anubis_76   (Olive baboon)   0
Macaca_mulatta_76_1   (Rhesus monkey)   0
Otolemur_garnettii_76_3   (Small-eared galago)   0
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Rattus_norvegicus_76_5.0   (Norway rat)   0
Mus_musculus_76_38   (House mouse)   0
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   0
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Cavia_porcellus_76_3   (Domestic guinea pig)   0
Ochotona_princeps_76   (American pika)   0
Vicugna_pacos_76_1   (Alpaca)   0
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   0
Canis_familiaris_76_3.1   (Dog)   0
Felis_catus_76_6.2   (Domestic cat)   0
Equus_caballus_76_2   (Horse)   0
Myotis_lucifugus_76_2.0   (Little brown bat)   0
Sorex_araneus_76_1   (European shrew)   0
Erinaceus_europaeus_76   (Western European hedgehog)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   0
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Meleagris_gallopavo_76_2   (Turkey)   0
Gallus_gallus_76_4   (Chicken)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Lepisosteus_oculatus_76   (Spotted gar)   0
Gadus_morhua_76_1   (Atlantic cod)   0
Takifugu_rubripes_76_4   (Torafugu)   0
Oryzias_latipes_76_1   (Japanese medaka)   0
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Poecilia_formosa_76   (Amazon molly)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Adineta_vaga 0
Crassostrea_gigas_22   (Pacific oyster)   0
Helobdella_robusta_ 0
Capitella_sp._I_ 0
Drosophila_simulans_1.3 0
Daphnia_pulex_   (Common water flea)   0
Tetranychus_urticae_   (Two-spotted spider mite)   0
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   0
Caenorhabditis_japonica_ 0
Caenorhabditis_briggsae_2 0
Schistosoma_mansoni_ 0
Amphimedon_queenslandica 0
Rhizopus_oryzae_RA_99-880_ 0
Microbotryum_violaceum_22 0
Sphaerobolus_stellatus_v1.0 0
Pisolithus_microcarpus_441_v1.0 0
Pleurotus_ostreatus_   (Oyster mushroom)   0
Amanita_muscaria_Koide_v1.0   (Fly agaric)   2
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Heterobasidion_annosum_ 0
Fomitopsis_pinicolav1.0 0
Fomitopsis_pinicola_FP-58527_SS1_v3.0 0
Phanerochaete_chrysosporium_RP-78_2.1 2
Apiospora_montagnei_NRRL_25634_v1.0 0
Magnaporthe_grisea_70-15_ 0
Sporotrichum_thermophile_ATCC_42464_ 0
Neurospora_discreta_FGSC_8579_ 0
Cryphonectria_parasitica_   (Chestnut blight fungus)   0
Verticillium_dahliae_VdLs.17_ 0
Glomerella_graminicola_22 0
Fusarium_graminearum_ 0
Nectria_haematococca_mpVI_ 0
Fusarium_oxysporum_f._sp._lycopersici_4286_ 0
Fusarium_verticillioides_7600_ 0
Trichoderma_citrinoviride_v1.0 0
Trichoderma_reesei_1.2 0
Trichoderma_virens_Gv29-8_ 0
Trichoderma_longibrachiatum_ATCC_18648_v1.0 0
Trichoderma_harzianum_CBS_226.95_v1.0 0
Amorphotheca_resinae_v1.0   (Creosote fungus)   1
Botrytis_cinerea_B05.10_ 0
Didymella_exigua_CBS_183.55_v1.0 1
Setosphaeria_turcica_v1.0 0
Cochliobolus_miyabeanus_ATCC_44560_v1.0 0
Cochliobolus_victoriae_FI3_v1.0 0
Cochliobolus_carbonum_26-R-13_v1.0 0
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   0
Alternaria_brassicicola_ 0
Cochliobolus_lunatus_m118_v2.0 0
Pyrenophora_teres_f._teres_22 0
Zasmidium_cellare_ATCC_36951_v1.0 0
Septoria_musiva_v1.0 0
Coccidioides_posadasii_RMSCC_3488_ 0
Coccidioides_immitis_RS_ 0
Trichophyton_verrucosum_HKI_0517_ 0
Arthroderma_benhamiae_CBS_112371_ 0
Uncinocarpus_reesii_1704_ 0
Penicillium_chrysogenum_Wisconsin_54-1255_ 0
Penicillium_chrysogenum_v1.0 0
Aspergillus_sydowii_v1.0 0
Aspergillus_versicolor_v1.0 0
Aspergillus_terreus_NIH2624_ 0
Aspergillus_clavatus_NRRL_1_ 0
Tuber_melanosporum_Mel28_22 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   1
Hansenula_polymorpha_v2.0 0
Pichia_stipitis_CBS_6054_ 0
Pichia_pastoris_GS115_ 0
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 0
Lachancea_kluyveri_ 0
Saccharomyces_cerevisiae_76   (Baker's yeast)   0
Pinus_taeda   (Loblolly pine)   0
Eucalyptus_grandis_v201   (Rose gum)   0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Gossypium_raimondii_v221 0
Thellungiella_halophila_v173 0
Capsella_rubella_v183 0
Arabidopsis_lyrata_   (Lyrate rockcress)   0
Arabidopsis_thaliana_10   (Thale cress)   0
Carica_papaya_   (Papaya)   0
Medicago_truncatula_   (Barrel medic)   0
Phaseolus_vulgaris_v186   (French bean)   0
Glycine_max_v109   (Soybean)   0
Cucumis_sativus_v122   (Cucumber)   0
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   0
Prunus_persica_v139   (Peach)   0
Linum_usitatissimum_v200   (Flax)   0
Populus_trichocarpa_v156   (Black cottonwood)   0
Mimulus_guttatus_v140   (Spotted monkey flower)   0
Solanum_lycopersicum_v.2.3   (Tomato)   0
Actinidia_chinensis_Hongyang_ 0
Aquilegia_coerulea_v195 0
Triticum_urartu_22 0
Triticum_aestivum_22   (Bread wheat)   1
Aegilops_tauschii_22 0
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_barthii_22   (African wild rice)   0
Oryza_glumaepatula_22 0
Oryza_glaberrima   (African rice)   0
Oryza_nivara_22 0
Oryza_brachyantha_22   (Malo sina)   0
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   0
Oryza_sativa_v193   (Rice)   0
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   0
Panicum_virgatum_v202   (Switchgrass)   0
Setaria_italica_v164   (Foxtail millet)   0
Zea_mays_subsp._mays_   (Maize)   0
Zea_mays_v181   (Maize)   0
Sorghum_bicolor_   (Sorghum)   0
Musa_balbisiana   (Balbis banana)   0
Musa_acuminata_22   (Wild Malaysian banana)   0
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Chlorella_vulgaris_ 0
Volvox_carteri_f._nagariensis_ 0
Volvox_carteri_v199 0
Ostreococcus_lucimarinus_CCE9901_ 1
Bathycoccus_prasinos_ 0
Micromonas_sp._RCC299_ 0
Thecamonas_trahens_ATCC_50062_ 0
Bigelowiella_natans_CCMP2755_22 1
Leishmania_mexicana_2.4 0
Leishmania_major_strain_Friedlin_ 0
Leishmania_infantum_JPCM5_2.4 0
Trypanosoma_congolense_2.4 0
Trypanosoma_brucei_gambiense_v4.1 0
Trypanosoma_brucei_TREU927_v4.1 0
Ectocarpus_siliculosus 0
Aureococcus_anophagefferens_ 1
Albugo_laibachii_22 0
Pythium_arrhenomanes_ATCC_12531_22 1
Pythium_ultimum_v1.7-2 0
Pythium_aphanidermatum_DAOM_BR444_22 0
Pythium_irregulare_DAOM_BR486_22 0
Phytophthora_sojae_1.1 0
Paramecium_tetraurelia_ 0
Cryptosporidium_parvum_Iowa_II 1
Symbiodinium_minutum_clade_B1_v1.2 0
Naegleria_gruberi_ 1
Guillardia_theta_CCMP2712_v1.0_ 0
Synechococcus_sp._PCC_6312 1
Geitlerinema_sp._PCC_7407 1
Cyanothece_sp._PCC_8802 1
cyanobacterium_UCYN-A 1
Halothece_sp._PCC_7418 1
Microcystis_aeruginosa_NIES-843 1
Nakamurella_multipartita_DSM_44233 1
Frankia_sp._EAN1pec 1
Streptomyces_bingchenggensis_BCW-1 1
Actinosynnema_mirum_DSM_43827 1
Amycolatopsis_mediterranei_U32 1
Propionibacterium_acnes_SK137 1
Actinoplanes_sp._N902-109 1
Gordonia_polyisoprenivorans_VH2 1
Mycobacterium_ulcerans_Agy99 1
Mycobacterium_chubuense_NBB4 1
Mycobacterium_marinum_M 1
Tropheryma_whipplei_TW08/27 1
Cellulomonas_flavigena_DSM_20109 1
Arthrobacter_sp._FB24 1
Thermomicrobium_roseum_DSM_5159 1
Herpetosiphon_aurantiacus_DSM_785 1
Oceanithermus_profundus_DSM_14977 0
Thermus_scotoductus_SA-01 1
Anaerococcus_prevotii_DSM_20548 0
Natranaerobius_thermophilus_JW/NM-WN-LF 0
Clostridiales_genomosp._BVAB3_str._UPII9-5 1
Clostridium_clariflavum_DSM_19732 0
Clostridium_thermocellum_ATCC_27405 1
Desulfitobacterium_hafniense_Y51 0
Desulfotomaculum_carboxydivorans_CO-1-SRB 0
Desulfotomaculum_ruminis_DSM_2154 0
Acetobacterium_woodii_DSM_1030 1
Eubacterium_limosum_KIST612 0
Clostridium_difficile_630 0
Clostridium_sticklandii_DSM_519 1
Filifactor_alocis_ATCC_35896 1
[Ruminococcus]_torques 1
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 0
Alkaliphilus_metalliredigens_QYMF 0
Clostridium_beijerinckii_NCIMB_8052 0
Clostridium_acetobutylicum_ATCC_824 1
Caldicellulosiruptor_hydrothermalis_108 1
Coprothermobacter_proteolyticus_DSM_5265 1
Moorella_thermoacetica_ATCC_39073 1
Thermoanaerobacter_pseudethanolicus_ATCC_33223 1
Thermoanaerobacter_sp._X514 1
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 1
Acetohalobium_arabaticum_DSM_5501 1
Halanaerobium_praevalens_DSM_2228 1
Carnobacterium_sp._WN1359 1
Lactococcus_garvieae_ATCC_49156 1
Exiguobacterium_sibiricum_255-15 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 0
Bacillus_selenitireducens_MLS10 0
Bacillus_sp._1NLA3E 0
Bacillus_amyloliquefaciens_FZB42 0
Bacillus_weihenstephanensis_KBAB4 0
Bacillus_thuringiensis_str._Al_Hakam 0
Bacillus_cereus_03BB102 0
Bacillus_anthracis_str._A0248 0
Bacillus_pseudofirmus_OF4 0
Bacillus_cellulosilyticus_DSM_2522 2
Staphylococcus_lugdunensis_HKU09-01 0
Candidatus_Cloacamonas_acidaminovorans 1
Melioribacter_roseus_P3M 0
Ignavibacterium_album_JCM_16511 0
Saprospira_grandis_str._Lewin 1
Salinibacter_ruber_M8 0
Rhodothermus_marinus_DSM_4252 1
Belliella_baltica_DSM_15883 1
Cyclobacterium_marinum_DSM_745 1
Marivirga_tractuosa_DSM_4126 1
Cytophaga_hutchinsonii_ATCC_33406 0
Spirosoma_linguale_DSM_74 1
Runella_slithyformis_DSM_19594 2
Bacteroides_salanitronis_DSM_18170 0
Bacteroides_vulgatus_ATCC_8482 1
Bacteroides_thetaiotaomicron_VPI-5482 1
Bacteroides_fragilis_YCH46 1
Pedobacter_saltans_DSM_12145 0
Solitalea_canadensis_DSM_3403 0
Pedobacter_heparinus_DSM_2366 1
Sphingobacterium_sp._21 0
Fluviicola_taffensis_DSM_16823 0
Owenweeksia_hongkongensis_DSM_17368 1
Croceibacter_atlanticus_HTCC2559 1
Zobellia_galactanivorans 0
Flavobacterium_psychrophilum_JIP02/86 0
Flavobacterium_johnsoniae_UW101 0
Candidatus_Protochlamydia_amoebophila_UWE25 1
Methylacidiphilum_infernorum_V4 1
Thermovirga_lienii_DSM_17291 1
Aminobacterium_colombiense_DSM_12261 1
Anaerobaculum_mobile_DSM_13181 1
Brachyspira_murdochii_DSM_12563 1
Brachyspira_intermedia_PWS/A 1
Brachyspira_pilosicoli_95/1000 1
Brachyspira_hyodysenteriae_WA1 1
Treponema_paraluiscuniculi_Cuniculi_A 1
Treponema_pallidum_subsp._pallidum_SS14 2
Thermodesulfobacterium_sp._OPB45 1
Desulfurispirillum_indicum_S5 1
Calditerrivibrio_nitroreducens_DSM_19672 1
Denitrovibrio_acetiphilus_DSM_12809 1
Flexistipes_sinusarabici_DSM_4947 1
Marinitoga_piezophila_KA3 1
Mesotoga_prima_MesG1.Ag.4.2 0
Kosmotoga_olearia_TBF_19.5.1 0
Thermosipho_melanesiensis_BI429 1
Hydrogenobacter_thermophilus_TK-6 1
Dictyoglomus_thermophilum_H-6-12 0
Candidatus_Solibacter_usitatus_Ellin6076 0
Leptotrichia_buccalis_C-1013-b 1
Ilyobacter_polytropus_DSM_2926 0
Bacteriovorax_marinus_SJ 1
Bdellovibrio_bacteriovorus_HD100 0
Arcobacter_sp._L 1
Arcobacter_nitrofigilis_DSM_7299 1
Campylobacter_sp._03-427 1
Wolinella_succinogenes_DSM_1740 1
Helicobacter_cetorum_MIT_00-7128 0
Helicobacter_bizzozeronii_CIII-1 1
Helicobacter_felis_ATCC_49179 1
Helicobacter_acinonychis_str._Sheeba 0
Syntrophus_aciditrophicus_SB 0
Desulfomonile_tiedjei_DSM_6799 0
Syntrophobacter_fumaroxidans_MPOB 0
Desulfobacterium_autotrophicum_HRM2 0
Desulfovibrio_magneticus_RS-1 0
Pelobacter_propionicus_DSM_2379 0
Corallococcus_coralloides_DSM_2259 0
Dechloromonas_aromatica_RCB 1
Thauera_sp._MZ1T 0
Pseudogulbenkiania_sp._NH8B 0
Laribacter_hongkongensis_HLHK9 0
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 1
beta_proteobacterium_CB 2
Thiomonas_intermedia_K12 0
Rubrivivax_gelatinosus_IL144 0
Burkholderia_rhizoxinica_HKI_454 0
Burkholderia_phytofirmans_PsJN 1
Burkholderia_xenovorans_LB400 1
Ralstonia_eutropha_JMP134 0
Cupriavidus_taiwanensis_LMG_19424 0
Cupriavidus_metallidurans_CH34 0
Cupriavidus_necator_N-1 0
Ralstonia_eutropha_H16 0
Ralstonia_pickettii_12D 0
Ralstonia_solanacearum_CFBP2957 1
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 2
Burkholderia_sp._CCGE1002 0
Burkholderia_thailandensis_E264 0
Burkholderia_pseudomallei_1106a 0
Burkholderia_mallei_SAVP1 0
Burkholderia_ambifaria_AMMD 1
Burkholderia_cenocepacia_HI2424 0
Burkholderia_multivorans_ATCC_17616 0
Burkholderia_vietnamiensis_G4 1
Burkholderia_gladioli_BSR3 0
Burkholderia_glumae_BGR1 0
Alicycliphilus_denitrificans_K601 0
Delftia_acidovorans_SPH-1 0
Polaromonas_naphthalenivorans_CJ2 1
Variovorax_paradoxus_S110 1
Rhodoferax_ferrireducens_T118 1
Acidovorax_ebreus_TPSY 0
Acidovorax_sp._KKS102 0
Acidovorax_sp._JS42 1
Comamonas_testosteroni_CNB-2 0
Herminiimonas_arsenicoxydans 0
Collimonas_fungivorans_Ter331 0
Janthinobacterium_sp._Marseille 1
Herbaspirillum_seropedicae_SmR1 0
Bordetella_petrii_DSM_12804 0
Bordetella_avium_197N 0
Achromobacter_xylosoxidans_A8 1
Achromobacter_xylosoxidans 1
Methylobacillus_flagellatus_KT 0
Magnetococcus_marinus_MC-1 0
Brevundimonas_subvibrioides_ATCC_15264 1
Caulobacter_crescentus_NA1000 1
Caulobacter_segnis_ATCC_21756 1
Phenylobacterium_zucineum_HLK1 2
Sphingopyxis_alaskensis_RB2256 0
Novosphingobium_sp._PP1Y 0
Sphingobium_sp._SYK-6 1
Sphingomonas_sp._MM-1 0
Ruegeria_pomeroyi_DSS-3 1
Tistrella_mobilis_KA081020-065 1
Magnetospirillum_magneticum_AMB-1 0
Rhodospirillum_rubrum_F11 0
Gluconobacter_oxydans_621H 0
Starkeya_novella_DSM_506 1
Xanthobacter_autotrophicus_Py2 0
Parvibaculum_lavamentivorans_DS-1 0
Sinorhizobium_fredii_NGR234 0
Sinorhizobium_medicae_WSM419 0
Mesorhizobium_sp._BNC1 0
Hyphomicrobium_sp._MC1 1
Saccharophagus_degradans_2-40 1
Aeromonas_veronii_B565 0
Aeromonas_salmonicida_subsp._salmonicida_A449 0
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 0
Vibrio_splendidus_LGP32 0
Vibrio_furnissii_NCTC_11218 0
Psychromonas_ingrahamii_37 0
Psychromonas_sp._CNPT3 0
Idiomarina_loihiensis_L2TR 0
Shewanella_piezotolerans_WP3 0
Shewanella_loihica_PV-4 0
Shewanella_sediminis_HAW-EB3 0
Shewanella_denitrificans_OS217 0
Shewanella_oneidensis_MR-1 0
Shewanella_baltica_OS185 0
Shewanella_woodyi_ATCC_51908 0
Shewanella_sp._MR-4 0
Shewanella_violacea_DSS12 1
Shewanella_frigidimarina_NCIMB_400 0
Shewanella_putrefaciens_CN-32 0
Colwellia_psychrerythraea_34H 0
Pseudoalteromonas_sp._SM9913 0
Pseudoalteromonas_atlantica_T6c 0
Pseudoalteromonas_haloplanktis_TAC125 0
Glaciecola_sp._4H-3-7+YE-5 0
Marinobacter_hydrocarbonoclasticus_ATCC_49840 0
Marinobacter_aquaeolei_VT8 0
Alteromonas_sp._SN2 0
Alteromonas_macleodii_str._'Deep_ecotype' 0
Alcanivorax_borkumensis_SK2 0
Marinomonas_sp._MWYL1 0
Marinomonas_mediterranea_MMB-1 0
Methylomicrobium_alcaliphilum 0
Methylomonas_methanica_MC09 0
Methylococcus_capsulatus_str._Bath 0
Pseudoxanthomonas_suwonensis_11-1 0
Thioalkalivibrio_sulfidophilus_HL-EbGr7 0
Dickeya_dadantii_Ech703 0
Dickeya_zeae_Ech1591 0
Sodalis_glossinidius_str._'morsitans' 0
Pantoea_vagans_C9-1 0
Klebsiella_pneumoniae_NTUH-K2044 0
Azotobacter_vinelandii_DJ 0
Pseudomonas_sp._TKP 0
Pseudomonas_sp._UW4 0
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 0
Pseudomonas_entomophila_L48 0
Pseudomonas_syringae_pv._tomato_str._DC3000 1
Pseudomonas_stutzeri_A1501 0
Pseudomonas_fulva_12-X 0
Pseudomonas_putida_F1 0
Pseudomonas_protegens_Pf-5 0
Pseudomonas_fluorescens_SBW25 0
Pseudomonas_mendocina_ymp 0
Pseudomonas_aeruginosa_UCBPP-PA14 0
Pseudomonas_sp._VLB120 0
Acinetobacter_sp._ADP1 0
Acidilobus_saccharovorans_345-15 0
Pyrolobus_fumarii_1A 0
Ignisphaera_aggregans_DSM_17230 0
Desulfurococcus_fermentans_DSM_16532 1
Desulfurococcus_mucosus_DSM_2162 0
Acidianus_hospitalis_W1 0
Sulfolobus_islandicus_Y.N.15.51 0
Sulfolobus_solfataricus_P2 0
Sulfolobus_acidocaldarius_DSM_639 1
Thermofilum_sp._1910b 0
Pyrobaculum_calidifontis_JCM_11548 1
Pyrobaculum_arsenaticum_DSM_13514 0
Pyrobaculum_oguniense_TE7 0
Pyrobaculum_islandicum_DSM_4184 0
Thermoproteus_uzoniensis_768-20 1
halophilic_archaeon_DL31 1
Methanohalobium_evestigatum_Z-7303 0
Methanococcoides_burtonii_DSM_6242 0
Methanosarcina_mazei_Go1 0
Methanohalophilus_mahii_DSM_5219 0
Ferroglobus_placidus_DSM_10642 0
Archaeoglobus_veneficus_SNP6 0
Thermococcus_onnurineus_NA1 0
Thermococcus_kodakarensis_KOD1 0
Thermococcus_sibiricus_MM_739 0
Thermococcus_barophilus_MP 0
Pyrococcus_sp._ST04 0
Pyrococcus_yayanosii_CH1 1
Pyrococcus_furiosus_COM1 0
Salinarchaeum_sp._Harcht-Bsk1 1
Halopiger_xanaduensis_SH-6 1
Haloterrigena_turkmenica_DSM_5511 0
Natrinema_sp._J7-2 0
Natrialba_magadii_ATCC_43099 0
Halorubrum_lacusprofundi_ATCC_49239 2
Haloquadratum_walsbyi_DSM_16790 0
Halogeometricum_borinquense_DSM_11551 0
Haloferax_mediterranei_ATCC_33500 0
Haloferax_volcanii_DS2 0
Halomicrobium_mukohataei_DSM_12286 1
Halorhabdus_utahensis_DSM_12940 1
Natronomonas_pharaonis_DSM_2160 1
Haloarcula_hispanica_ATCC_33960 0
Haloarcula_marismortui_ATCC_43049 4
Halalkalicoccus_jeotgali_B3 2
Halobacterium_salinarum_R1 1
Halobacterium_sp._NRC-1 1
Methanococcus_voltae_A3 0
Methanococcus_vannielii_SB 1

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Strains
Genome     Number
Coccidioides_posadasii_str._Silveira_ 0
Coccidioides_immitis_RMSCC_3703_ 0
Coccidioides_immitis_RMSCC_2394_ 0
Histoplasma_capsulatum_G186AR 0
Saccharomyces_cerevisiae_PW5 0
Saccharomyces_cerevisiae_FL100 0
Saccharomyces_cerevisiae_CLIB324 0
Saccharomyces_cerevisiae_CBS7960 0
Saccharomyces_cerevisiae_YJM269 0
Saccharomyces_cerevisiae_T7 0
Saccharomyces_cerevisiae_VL3 0
Saccharomyces_cerevisiae_Vin13 0
Saccharomyces_cerevisiae_W303 0
Saccharomyces_cerevisiae_JAY291 0
Saccharomyces_cerevisiae_AWRI1631 0
Saccharomyces_cerevisiae_YJM789_ 0
Saccharomyces_cerevisiae_YJM789 0
Saccharomyces_cerevisiae_RM11-1a 0
Saccharomyces_cerevisiae_RM11-1a_ 0
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0
Hordeum_vulgare_22   (Domesticated barley)   0
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Trypanosoma_brucei_Lister_427_v4.1 0
Chamaesiphon_minutus_PCC_6605 1
Dactylococcopsis_salina_PCC_8305 1
Synechococcus_sp._PCC_7002 1
Arthrospira_platensis_NIES-39 1
Cyanothece_sp._PCC_7424 1
Cyanothece_sp._ATCC_51142 1
Cyanothece_sp._PCC_8801 1
Streptomyces_rapamycinicus_NRRL_5491 1
Streptomyces_venezuelae_ATCC_10712 1
Amycolatopsis_mediterranei_RB 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_mediterranei_S699 1
Propionibacterium_avidum_44067 1
Propionibacterium_acnes_ATCC_11828 1
Propionibacterium_acnes_TypeIA2_P.acn31 1
Propionibacterium_acnes_TypeIA2_P.acn17 1
Propionibacterium_acnes_TypeIA2_P.acn33 1
Propionibacterium_acnes_C1 1
Propionibacterium_acnes_HL096PA1 1
Propionibacterium_acnes_6609 1
Propionibacterium_acnes_266 1
Propionibacterium_acnes_KPA171202 1
Actinoplanes_friuliensis_DSM_7358 1
Nocardia_brasiliensis_ATCC_700358 1
Mycobacterium_sp._JDM601 1
Mycobacterium_liflandii_128FXT 1
Corynebacterium_terpenotabidum_Y-11 0
Tropheryma_whipplei_str._Twist 1
Thermus_oshimai_JL-2 1
Thermus_thermophilus_JL-18 1
Thermus_thermophilus_HB8 1
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 1
Clostridium_acidurici_9a 1
Desulfosporosinus_meridiei_DSM_13257 1
Desulfitobacterium_hafniense_DCB-2 0
Clostridium_difficile_BI1 0
Clostridium_difficile_R20291 0
Clostridium_difficile_CD196 0
Coprococcus_catus_GD/7 1
Candidatus_Arthromitus_sp._SFB-rat-Yit 1
Candidatus_Arthromitus_sp._SFB-mouse-Yit 1
Clostridium_tetani_genome_12124569 1
Clostridium_perfringens_str._13 1
Clostridium_botulinum_BKT015925 1
Clostridium_acetobutylicum_DSM_1731 1
Clostridium_acetobutylicum_EA_2018 1
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 1
Thermoanaerobacter_sp._X513 1
Halobacteroides_halobius_DSM_5150 1
Enterococcus_mundtii_QU_25 1
Lactococcus_garvieae_Lg2 1
Streptococcus_lutetiensis_033 1
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 1
Streptococcus_equi_subsp._zooepidemicus 1
Streptococcus_iniae_SF1 1
Streptococcus_thermophilus_MN-ZLW-002 1
Streptococcus_thermophilus_JIM_8232 1
Streptococcus_thermophilus_ND03 1
Streptococcus_suis_98HAH33 0
Listeria_monocytogenes_J1-220 1
Listeria_monocytogenes_ATCC_19117 1
Listeria_monocytogenes_SLCC2378 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 0
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 0
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 0
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 0
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 0
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 0
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 0
Bacillus_amyloliquefaciens_LFB112 0
Bacillus_amyloliquefaciens_CC178 0
Bacillus_amyloliquefaciens_IT-45 0
Bacillus_amyloliquefaciens_XH7 0
Bacillus_amyloliquefaciens_LL3 0
Bacillus_amyloliquefaciens_TA208 0
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 0
Bacillus_toyonensis_BCT-7112 0
Bacillus_thuringiensis_HD-771 0
Bacillus_thuringiensis_HD-789 0
Bacillus_thuringiensis_MC28 0
Bacillus_thuringiensis_serovar_chinensis_CT-43 0
Bacillus_thuringiensis_YBT-1518 0
Bacillus_thuringiensis_Bt407 0
Bacillus_thuringiensis_serovar_konkukian_str._97-27 0
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 0
Bacillus_thuringiensis_BMB171 0
Bacillus_thuringiensis_serovar_finitimus_YBT-020 0
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 0
Bacillus_cereus_FRI-35 0
Bacillus_cereus_biovar_anthracis_str._CI 0
Bacillus_cereus_AH820 0
Bacillus_cereus_AH187 0
Bacillus_cereus_B4264 0
Bacillus_cereus_G9842 0
Bacillus_cereus_Q1 0
Bacillus_cereus_F837/76 0
Bacillus_cereus_NC7401 0
Bacillus_cereus_E33L 0
Bacillus_cereus_ATCC_14579 0
Bacillus_cereus_ATCC_10987 0
Bacillus_anthracis_str._CDC_684 0
Bacillus_anthracis_str._'Ames_Ancestor' 0
Bacillus_anthracis_str._Sterne 0
Bacillus_anthracis_str._Ames 0
Staphylococcus_lugdunensis_N920143 0
Salinibacter_ruber_DSM_13855 0
Echinicola_vietnamensis_DSM_17526 2
Emticicia_oligotrophica_DSM_17448 0
Prevotella_sp._oral_taxon_299_str._F0039 1
Alistipes_shahii_WAL_8301 0
Bacteroides_xylanisolvens_XB1A 2
Bacteroides_fragilis_638R 1
Bacteroides_fragilis_NCTC_9343 1
Blattabacterium_sp._(Periplaneta_americana)_str._BPLAN 1
Brachyspira_pilosicoli_WesB 1
Brachyspira_pilosicoli_P43/6/78 1
Treponema_pallidum_str._Fribourg-Blanc 1
Treponema_pallidum_subsp._pertenue_str._Gauthier 1
Treponema_pallidum_subsp._pertenue_str._CDC2 1
Treponema_pallidum_subsp._pertenue_str._SamoaD 1
Treponema_pallidum_subsp._pallidum_str._Mexico_A 1
Treponema_pallidum_subsp._pallidum_str._Chicago 1
Treponema_pallidum_subsp._pallidum_DAL-1 1
Treponema_pallidum_subsp._pallidum_str._Nichols 1
Hydrogenobacter_thermophilus_TK-6 1
Bdellovibrio_bacteriovorus_str._Tiberius 0
Arcobacter_butzleri_7h1h 1
Arcobacter_butzleri_ED-1 1
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 1
Campylobacter_coli_76339 1
Campylobacter_coli_15-537360 1
Campylobacter_coli_CVM_N29710 1
Helicobacter_pylori_BM012S 1
Helicobacter_pylori_BM012A 1
Helicobacter_pylori_SouthAfrica20 0
Helicobacter_pylori_UM298 0
Helicobacter_pylori_UM066 0
Helicobacter_pylori_UM037 0
Helicobacter_pylori_UM299 0
Helicobacter_pylori_UM032 0
Helicobacter_pylori_Rif2 0
Helicobacter_pylori_Rif1 0
Helicobacter_pylori_HUP-B14 0
Helicobacter_pylori_PeCan18 1
Helicobacter_pylori_Shi112 0
Helicobacter_pylori_Aklavik86 0
Helicobacter_pylori_Aklavik117 0
Helicobacter_pylori_SNT49 1
Helicobacter_pylori_Puno135 0
Helicobacter_pylori_Puno120 0
Helicobacter_pylori_ELS37 0
Helicobacter_pylori_Gambia94/24 1
Helicobacter_pylori_SouthAfrica7 0
Helicobacter_pylori_India7 1
Helicobacter_pylori_Lithuania75 0
Helicobacter_pylori_2017 1
Helicobacter_pylori_2018 1
Helicobacter_pylori_908 1
Helicobacter_pylori_F57 0
Helicobacter_pylori_F30 0
Helicobacter_pylori_F16 0
Helicobacter_pylori_Sat464 0
Helicobacter_pylori_Cuz20 0
Helicobacter_pylori_PeCan4 1
Helicobacter_pylori_SJM180 1
Helicobacter_pylori_B8 1
Helicobacter_pylori_v225d 0
Helicobacter_pylori_83 0
Helicobacter_pylori_35A 0
Helicobacter_pylori_G27 1
Helicobacter_pylori_HPAG1 0
Helicobacter_pylori_51 0
Helicobacter_pylori_J99 1
Helicobacter_pylori_26695 0
Helicobacter_pylori_26695 0
Myxococcus_stipitatus_DSM_14675 1
Burkholderia_phenoliruptrix_BR3459a 0
Ralstonia_pickettii_12J 0
Ralstonia_solanacearum_FQY_4 1
Ralstonia_solanacearum_Po82 1
Ralstonia_solanacearum_PSI07 1
Ralstonia_solanacearum_CMR15 2
Ralstonia_solanacearum_GMI1000 1
Burkholderia_sp._YI23 1
Burkholderia_sp._CCGE1003 0
Burkholderia_sp._CCGE1001 0
Burkholderia_sp._KJ006 1
Burkholderia_thailandensis_MSMB121 0
Burkholderia_pseudomallei_MSHR305 0
Burkholderia_pseudomallei_NCTC_13179 0
Burkholderia_pseudomallei_BPC006 0
Burkholderia_pseudomallei_1026b 0
Burkholderia_pseudomallei_MSHR346 0
Burkholderia_pseudomallei_668 0
Burkholderia_pseudomallei_1710b 1
Burkholderia_pseudomallei_K96243 0
Burkholderia_mallei_NCTC_10229 0
Burkholderia_mallei_NCTC_10247 0
Burkholderia_mallei_ATCC_23344 1
Burkholderia_lata 0
Burkholderia_ambifaria_MC40-6 0
Burkholderia_cenocepacia_MC0-3 0
Burkholderia_cenocepacia_AU_1054 0
Burkholderia_cenocepacia_J2315 0
Burkholderia_multivorans_ATCC_17616 0
Burkholderia_cepacia_GG4 0
Alicycliphilus_denitrificans_BC 0
Variovorax_paradoxus_B4 1
Variovorax_paradoxus_EPS 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1
Caulobacter_crescentus_CB15 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 0
Rhodospirillum_rubrum_ATCC_11170 0
Brucella_ceti_TE28753-12 0
Sinorhizobium_fredii_HH103 0
Sinorhizobium_meliloti_GR4 0
Sinorhizobium_meliloti_Rm41 0
Sinorhizobium_meliloti_SM11 0
Sinorhizobium_meliloti_BL225C 0
Sinorhizobium_meliloti_1021 0
Rhodopseudomonas_palustris_TIE-1 1
Bradyrhizobium_sp._BTAi1 1
Aeromonas_hydrophila_ML09-119 0
Idiomarina_loihiensis_GSL_199 0
Shewanella_sp._W3-18-1 0
Shewanella_sp._ANA-3 0
Shewanella_baltica_BA175 0
Shewanella_baltica_OS678 0
Shewanella_baltica_OS117 0
Shewanella_baltica_OS223 0
Shewanella_baltica_OS195 0
Shewanella_baltica_OS155 0
Shewanella_sp._MR-7 0
Shewanella_putrefaciens_200 0
Glaciecola_psychrophila_170 0
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 0
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U8' 0
Alteromonas_macleodii_str._'Ionian_Sea_U7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U4' 0
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 0
Alteromonas_macleodii_AltDE1 0
Alteromonas_macleodii_str._'English_Channel_673' 0
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 0
Alteromonas_macleodii_str._'Black_Sea_11' 0
Alcanivorax_dieselolei_B5 0
Stenotrophomonas_maltophilia_D457 0
Dickeya_dadantii_Ech586 0
Dickeya_dadantii_3937 0
Klebsiella_pneumoniae_KCTC_2242 0
Azotobacter_vinelandii_CA6 0
Azotobacter_vinelandii_CA 0
Pseudomonas_denitrificans_ATCC_13867 0
Pseudomonas_syringae_pv._phaseolicola_1448A 0
Pseudomonas_syringae_pv._syringae_B728a 0
Pseudomonas_stutzeri_CCUG_29243 0
Pseudomonas_stutzeri_DSM_10701 0
Pseudomonas_stutzeri_DSM_4166 0
Pseudomonas_stutzeri_RCH2 0
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 0
Pseudomonas_monteilii_SB3101 0
Pseudomonas_monteilii_SB3078 0
Pseudomonas_putida_H8234 0
Pseudomonas_putida_HB3267 0
Pseudomonas_putida_NBRC_14164 0
Pseudomonas_putida_DOT-T1E 0
Pseudomonas_putida_S16 0
Pseudomonas_putida_BIRD-1 0
Pseudomonas_putida_ND6 1
Pseudomonas_putida_KT2440 0
Pseudomonas_putida_GB-1 0
Pseudomonas_protegens_CHA0 0
Pseudomonas_poae_RE*1-1-14 1
Pseudomonas_fluorescens_F113 0
Pseudomonas_fluorescens_A506 0
Pseudomonas_fluorescens_R124 0
Pseudomonas_fluorescens_Pf0-1 0
Pseudomonas_resinovorans_NBRC_106553 1
Pseudomonas_mendocina_NK-01 1
Pseudomonas_aeruginosa_SCV20265 0
Pseudomonas_aeruginosa_MTB-1 0
Pseudomonas_aeruginosa_LES431 0
Pseudomonas_aeruginosa_RP73 0
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_PA1R 0
Pseudomonas_aeruginosa_PA1 0
Pseudomonas_aeruginosa_DK2 1
Pseudomonas_aeruginosa_NCGM2.S1 0
Pseudomonas_aeruginosa_M18 0
Pseudomonas_aeruginosa_LESB58 1
Pseudomonas_aeruginosa_PA7 0
Pseudomonas_aeruginosa_PAO1 0
Caldisphaera_lagunensis_DSM_15908 1
Sulfolobus_islandicus_LAL14/1 0
Sulfolobus_islandicus_REY15A 1
Sulfolobus_islandicus_HVE10/4 0
Sulfolobus_islandicus_Y.G.57.14 0
Sulfolobus_islandicus_L.S.2.15 0
Sulfolobus_islandicus_M.16.27 0
Sulfolobus_islandicus_M.14.25 0
Sulfolobus_islandicus_M.16.4 0
Sulfolobus_islandicus_L.D.8.5 0
Sulfolobus_solfataricus_98/2 0
Sulfolobus_acidocaldarius_Ron12/I 1
Sulfolobus_acidocaldarius_N8 1
Methanomethylovorans_hollandica_DSM_15978 0
Methanolobus_psychrophilus_R15 0
Archaeoglobus_sulfaticallidus_PM70-1 0
Thermococcus_litoralis_DSM_5473 0
Pyrococcus_sp._NA2 0
Pyrococcus_furiosus_DSM_3638 0
Halovivax_ruber_XH-70 1
Natrinema_pellirubrum_DSM_15624 2
Natronococcus_occultus_SP4 0
Natronobacterium_gregoryi_SP2 0
Haloquadratum_walsbyi_C23 0
Halorhabdus_tiamatea_SARL4B 1
Natronomonas_moolapensis_8.8.11 1
Haloarcula_hispanica_N601 0
Methanococcus_maripaludis_X1 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   0
Pan_troglodytes_69_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Pongo_abelii_69_2   (Sumatran orangutan)   0
Macaca_mulatta_69_1   (Rhesus monkey)   0
Otolemur_garnettii_69_3   (Small-eared galago)   0
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Rattus_norvegicus_69_3.4   (Norway rat)   0
Mus_musculus_69_38   (House mouse)   0
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   0
Cavia_porcellus_69_3   (Domestic guinea pig)   0
Ochotona_princeps_69   (American pika)   0
Vicugna_pacos_69_1   (Alpaca)   0
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   0
Canis_familiaris_69_3.1   (Dog)   0
Felis_catus_69   (Domestic cat)   0
Equus_caballus_69_2   (Horse)   0
Myotis_lucifugus_69_2.0   (Little brown bat)   0
Sorex_araneus_69_1   (European shrew)   0
Erinaceus_europaeus_69   (Western European hedgehog)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0
Meleagris_gallopavo_69_2   (Turkey)   0
Gallus_gallus_69_2   (Chicken)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Gadus_morhua_69_1   (Atlantic cod)   0
Takifugu_rubripes_69_4   (Torafugu)   0
Oryzias_latipes_69_1   (Japanese medaka)   0
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   0
Arabidopsis_thaliana_10   (Thale cress)   0

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Homo_sapiens__(NCBI_version)   (Human)   0
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   0
Lotus_japonicus__(Early_assembly) 0
Malus_x_domestica_(Duplicate)   (Apple)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   0
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   0
Phoenix_dactylifera__(Early_draft)   (Date palm)   0
NCBI_plasmid_sequences_(Plasmids) 14
NCBI_2017_08_genome 4196
Protozoadb_2010_08_(Protozoadb) 2
TargetDB__(Targets) 3
NCBI_viral_sequences_(Viral) 1
STRING_v9.0.5_(STRING) 88
Uniprot_2018_03_genome 33600

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