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Domain combinations for 55681,55681,52954 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55681 - Class II aaRS and biotin synthetases
55681 - Class II aaRS and biotin synthetases
52954 - Class II aaRS ABD-related

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Procavia_capensis_76_1   (Cape rock hyrax)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1
Macropus_eugenii_76_1.0   (Tammar wallaby)   1
Gadus_morhua_76_1   (Atlantic cod)   1
Megaselia_scalaris_22 1
Sarcoptes_scabiei 1
Meloidogyne_incognita_   (Southern root-knot nematode)   0
Schistosoma_mansoni_ 0
Conidiobolus_coronatus_NRRL28638_v1.0 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1
Coccidioides_posadasii_RMSCC_3488_ 1
Candida_tropicalis_MYA-3404_ 0
Candida_parapsilosis_ 0
Saccharomyces_mikatae_MIT 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1
Pinus_taeda   (Loblolly pine)   1
Malus_domestica_v196   (Apple)   0
Oryza_punctata_22 0
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   0
Setaria_italica_v164   (Foxtail millet)   0
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Pythium_iwayamai_DAOM_BR242034_22 0
Phytophthora_capsici_ 0
Plasmodium_falciparum_3D7_ 0

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Strains
Genome     Number
Coccidioides_posadasii_str._Silveira_ 1
Saccharomyces_cerevisiae_UC5 1
Saccharomyces_cerevisiae_PW5 1
Saccharomyces_cerevisiae_FL100 1
Saccharomyces_cerevisiae_CLIB324 1
Saccharomyces_cerevisiae_CBS7960 1
Saccharomyces_cerevisiae_T7 1
Saccharomyces_cerevisiae_FostersB 1
Saccharomyces_cerevisiae_VL3 1
Saccharomyces_cerevisiae_Vin13 1
Saccharomyces_cerevisiae_LalvinQA23 1
Saccharomyces_cerevisiae_Sigma1278b 1
Saccharomyces_cerevisiae_W303 1
Saccharomyces_cerevisiae_JAY291 1
Saccharomyces_cerevisiae_AWRI1631 1
Saccharomyces_cerevisiae_CLIB215 1
Saccharomyces_cerevisiae_Y10 1
Saccharomyces_cerevisiae_YJM789_ 1
Saccharomyces_cerevisiae_YJM789 1
Saccharomyces_cerevisiae_RM11-1a 1
Saccharomyces_cerevisiae_RM11-1a_ 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1
Plasmodium_falciparum_HB3_ 0
Plasmodium_falciparum_Dd2_ 0

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Longest transcript per gene
Genome     Number
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Felis_catus_69   (Domestic cat)   0
Procavia_capensis_69_1   (Cape rock hyrax)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1
Macropus_eugenii_69_1.0   (Tammar wallaby)   1
Gadus_morhua_69_1   (Atlantic cod)   1
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
NCBI_2017_08_genome 16
Uniprot_2018_03_genome 180
Protozoadb_2010_08_(Protozoadb) 0
TargetDB__(Targets) 1
STRING_v9.0.5_(STRING) 2

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