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Domain combinations for 55781,_gap_,109604 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55781 - GAF domain-like
109604 - HD-domain/PDEase-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Sorex_araneus_76_1   (European shrew)   0
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Latimeria_chalumnae_76_1   (Coelacanth)   0
Gadus_morhua_76_1   (Atlantic cod)   0
Astyanax_mexicanus_76   (Mexican tetra)   0
Anopheles_darlingi_22   (American malaria mosquito)   0
Amphimedon_queenslandica 0
Spizellomyces_punctatus_DAOM_BR117_ 0
Volvox_carteri_f._nagariensis_ 0
Bigelowiella_natans_CCMP2755_22 0
Ectocarpus_siliculosus 0
Albugo_laibachii_22 0
Pythium_iwayamai_DAOM_BR242034_22 0
Pythium_arrhenomanes_ATCC_12531_22 0
Pythium_ultimum_v1.7-2 0
Pythium_aphanidermatum_DAOM_BR444_22 0
Pythium_irregulare_DAOM_BR486_22 0
Pythium_vexans_DAOM_BR484_22 0
Phytophthora_ramorum_1.1   (Sudden oak death agent)   0
Phytophthora_sojae_1.1 0
Phytophthora_infestans_T30-4_ 0
Phytophthora_capsici_ 0
Hyaloperonospora_arabidopsidis_22 0
Neospora_caninum 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 0
Symbiodinium_minutum_clade_B1_v1.2 0
Trichomonas_vaginalis_ 1
Guillardia_theta_CCMP2712_v1.0_ 0
Trichodesmium_erythraeum_IMS101 1
Pelotomaculum_thermopropionicum_SI 1
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 1
Thermodesulfobium_narugense_DSM_14796 0
Candidatus_Cloacamonas_acidaminovorans 0
Caldisericum_exile_AZM16c01 0
Arcobacter_nitrofigilis_DSM_7299 0
Syntrophus_aciditrophicus_SB 1
Desulfococcus_oleovorans_Hxd3 0
Hippea_maritima_DSM_10411 0
Dechloromonas_aromatica_RCB 1
Gallionella_capsiferriformans_ES-2 1
Methylotenera_versatilis_301 1
Alcanivorax_borkumensis_SK2 1
Halorhodospira_halophila_SL1 1

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Strains
Genome     Number
Neospora_caninum_Nc-Liverpool_6.2 0

Longest transcript per gene
Genome     Number
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Felis_catus_69   (Domestic cat)   0
Sorex_araneus_69_1   (European shrew)   0
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Latimeria_chalumnae_69_1   (Coelacanth)   0
Gadus_morhua_69_1   (Atlantic cod)   0

Others
Genome     Number
STRING_v9.0.5_(STRING) 8
NCBI_2017_08_genome 90
Uniprot_2018_03_genome 792
Protozoadb_2010_08_(Protozoadb) 2

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