SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for 55785,52540,46689 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55785 - PYP-like sensor domain (PAS domain)
52540 - P-loop containing nucleoside triphosphate hydrolases
46689 - Homeodomain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Eggerthella_sp._YY7918 0
Roseiflexus_castenholzii_DSM_13941 0
Chloroflexus_sp._MS-G 0
Chloroflexus_aggregans_DSM_9485 0
Chloroflexus_aurantiacus_J-10-fl 0
Megasphaera_elsdenii_DSM_20460 1
Acidaminococcus_intestini_RyC-MR95 0
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 0
Natranaerobius_thermophilus_JW/NM-WN-LF 2
Symbiobacterium_thermophilum_IAM_14863 3
Oscillibacter_valericigenes_Sjm18-20 2
butyrate-producing_bacterium_SS3/4 1
Thermincola_potens_JR 0
Pelotomaculum_thermopropionicum_SI 3
Desulfosporosinus_acidiphilus_SJ4 8
Desulfosporosinus_orientis_DSM_765 17
Desulfitobacterium_hafniense_Y51 4
Desulfitobacterium_dehalogenans_ATCC_51507 6
Desulfotomaculum_reducens_MI-1 3
Desulfotomaculum_acetoxidans_DSM_771 0
Desulfotomaculum_kuznetsovii_DSM_6115 2
Desulfotomaculum_carboxydivorans_CO-1-SRB 1
Desulfotomaculum_ruminis_DSM_2154 2
Acetobacterium_woodii_DSM_1030 2
Eubacterium_limosum_KIST612 4
Clostridium_difficile_630 3
Clostridium_sticklandii_DSM_519 3
[Ruminococcus]_torques 0
Syntrophothermus_lipocalidus_DSM_12680 6
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 1
Heliobacterium_modesticaldum_Ice1 0
Alkaliphilus_oremlandii_OhILAs 7
Alkaliphilus_metalliredigens_QYMF 5
Clostridium_sp._BNL1100 1
Clostridium_novyi_NT 0
Clostridium_ljungdahlii_DSM_13528 3
Clostridium_kluyveri_DSM_555 1
Clostridium_beijerinckii_NCIMB_8052 0
Clostridium_tetani_E88 0
Clostridium_perfringens_ATCC_13124 0
Clostridium_botulinum_A_str._ATCC_3502 1
Clostridium_acetobutylicum_ATCC_824 0
Mahella_australiensis_50-1_BON 0
Thermosediminibacter_oceani_DSM_16646 5
Thermodesulfobium_narugense_DSM_14796 1
Tepidanaerobacter_acetatoxydans_Re1 1
Thermoanaerobacter_tengcongensis_MB4 2
Carboxydothermus_hydrogenoformans_Z-2901 1
Moorella_thermoacetica_ATCC_39073 0
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 0
Thermoanaerobacter_pseudethanolicus_ATCC_33223 0
Thermoanaerobacter_sp._X514 0
Thermoanaerobacter_italicus_Ab9 0
Thermoanaerobacter_wiegelii_Rt8.B1 2
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 0
Acetohalobium_arabaticum_DSM_5501 0
Halothermothrix_orenii_H_168 0
Halanaerobium_hydrogeniformans 0
Halanaerobium_praevalens_DSM_2228 0
Exiguobacterium_sp._MH3 0
Exiguobacterium_sp._AT1b 0
Exiguobacterium_sibiricum_255-15 0
Kyrpidia_tusciae_DSM_2912 2
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 4
Brevibacillus_brevis_NBRC_100599 8
Paenibacillus_mucilaginosus_3016 0
Bacillus_selenitireducens_MLS10 1
Listeria_welshimeri_serovar_6b_str._SLCC5334 1
Listeria_innocua_Clip11262 1
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 1
Listeria_ivanovii_subsp._ivanovii_PAM_55 1
Solibacillus_silvestris_StLB046 2
Geobacillus_thermoglucosidasius_C56-YS93 2
Lysinibacillus_sphaericus_C3-41 2
Oceanobacillus_iheyensis_HTE831 2
Anoxybacillus_flavithermus_WK1 0
Geobacillus_thermoleovorans_CCB_US3_UF5 0
Geobacillus_kaustophilus_HTA426 1
Geobacillus_sp._GHH01 5
Geobacillus_sp._WCH70 0
Geobacillus_thermodenitrificans_NG80-2 3
Halobacillus_halophilus_DSM_2266 2
Bacillus_sp._JS 1
Bacillus_sp._1NLA3E 3
Bacillus_amyloliquefaciens_FZB42 1
Bacillus_atrophaeus_1942 2
Bacillus_subtilis_subsp._subtilis_str._168 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1
Bacillus_halodurans_C-125 2
Bacillus_weihenstephanensis_KBAB4 3
Bacillus_thuringiensis_str._Al_Hakam 3
Bacillus_cereus_03BB102 3
Bacillus_anthracis_str._A0248 3
Bacillus_pseudofirmus_OF4 6
Bacillus_clausii_KSM-K16 2
Bacillus_cellulosilyticus_DSM_2522 0
Bacillus_pumilus_SAFR-032 2
Bacillus_megaterium_DSM_319 3
Bacillus_coagulans_2-6 1
Melioribacter_roseus_P3M 1
Ignavibacterium_album_JCM_16511 1
Haliscomenobacter_hydrossis_DSM_1100 0
Salinibacter_ruber_M8 0
Isosphaera_pallida_ATCC_43644 0
Planctomyces_brasiliensis_DSM_5305 1
Planctomyces_limnophilus_DSM_3776 1
Spirochaeta_smaragdinae_DSM_11293 0
Sphaerochaeta_globus_str._Buddy 0
Spirochaeta_caldaria_DSM_7334 1
Spirochaeta_thermophila_DSM_6192 1
Thermodesulfatator_indicus_DSM_15286 0
Flexistipes_sinusarabici_DSM_4947 1
Marinitoga_piezophila_KA3 0
Petrotoga_mobilis_SJ95 0
Mesotoga_prima_MesG1.Ag.4.2 0
Kosmotoga_olearia_TBF_19.5.1 0
Fervidobacterium_pennivorans_DSM_9078 0
Fervidobacterium_nodosum_Rt17-B1 0
Thermosipho_melanesiensis_BI429 0
Thermosipho_africanus_TCF52B 0
Thermotoga_lettingae_TMO 0
Thermotoga_thermarum_DSM_5069 0
Hydrogenobaculum_sp._SN 0
Hydrogenobaculum_sp._HO 0
Hydrogenobaculum_sp._Y04AAS1 0
Aquifex_aeolicus_VF5 0
Hydrogenobacter_thermophilus_TK-6 0
Caldisericum_exile_AZM16c01 0
Candidatus_Solibacter_usitatus_Ellin6076 1
Granulicella_mallensis_MP5ACTX8 0
Candidatus_Nitrospira_defluvii 1
Leptospirillum_ferrooxidans_C2-3 1
Acidithiobacillus_caldus_SM-1 2
Acidithiobacillus_ferrooxidans_ATCC_53993 1
Desulfarculus_baarsii_DSM_2075 2
Desulfobacca_acetoxidans_DSM_11109 1
Syntrophus_aciditrophicus_SB 2
Desulfomonile_tiedjei_DSM_6799 5
Syntrophobacter_fumaroxidans_MPOB 4
Desulfurivibrio_alkaliphilus_AHT2 1
Desulfotalea_psychrophila_LSv54 4
Desulfobulbus_propionicus_DSM_2032 3
Desulfatibacillum_alkenivorans_AK-01 6
Desulfobacterium_autotrophicum_HRM2 9
Desulfococcus_oleovorans_Hxd3 3
Desulfohalobium_retbaense_DSM_5692 5
Desulfomicrobium_baculatum_DSM_4028 4
Desulfovibrio_piezophilus 3
Desulfovibrio_aespoeensis_Aspo-2 3
Desulfovibrio_magneticus_RS-1 3
Desulfovibrio_alaskensis_G20 5
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 4
Desulfovibrio_salexigens_DSM_2638 3
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 2
Desulfovibrio_africanus_str._Walvis_Bay 4
Geobacter_daltonii_FRC-32 0
Geobacter_sp._M21 2
Geobacter_uraniireducens_Rf4 0
Geobacter_lovleyi_SZ 2
Geobacter_bemidjiensis_Bem 2
Geobacter_sulfurreducens_KN400 1
Geobacter_metallireducens_GS-15 2
Pelobacter_propionicus_DSM_2379 1
Pelobacter_carbinolicus_DSM_2380 2
Haliangium_ochraceum_DSM_14365 1
Anaeromyxobacter_sp._Fw109-5 2
Anaeromyxobacter_dehalogenans_2CP-1 1
Stigmatella_aurantiaca_DW4/3-1 0
Dechloromonas_aromatica_RCB 2
Thauera_sp._MZ1T 1
Azoarcus_sp._KH32C 1
Azoarcus_sp._BH72 1
Aromatoleum_aromaticum_EbN1 1
Dechlorosoma_suillum_PS 1
Laribacter_hongkongensis_HLHK9 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 1
Methylibium_petroleiphilum_PM1 0
Rubrivivax_gelatinosus_IL144 1
Leptothrix_cholodnii_SP-6 1
Burkholderia_rhizoxinica_HKI_454 0
Burkholderia_phytofirmans_PsJN 1
Burkholderia_phymatum_STM815 1
Burkholderia_xenovorans_LB400 2
Ralstonia_eutropha_JMP134 2
Cupriavidus_taiwanensis_LMG_19424 0
Cupriavidus_metallidurans_CH34 2
Cupriavidus_necator_N-1 0
Ralstonia_eutropha_H16 0
Ralstonia_pickettii_12D 0
Ralstonia_solanacearum_CFBP2957 0
Burkholderia_sp._RPE64 1
Burkholderia_sp._CCGE1002 1
Burkholderia_thailandensis_E264 1
Burkholderia_pseudomallei_1106a 1
Burkholderia_mallei_SAVP1 1
Burkholderia_ambifaria_AMMD 2
Burkholderia_cenocepacia_HI2424 2
Burkholderia_multivorans_ATCC_17616 2
Burkholderia_vietnamiensis_G4 2
Burkholderia_gladioli_BSR3 1
Burkholderia_glumae_BGR1 0
Verminephrobacter_eiseniae_EF01-2 0
Alicycliphilus_denitrificans_K601 0
Ramlibacter_tataouinensis_TTB310 1
Delftia_sp._Cs1-4 1
Delftia_acidovorans_SPH-1 1
Polaromonas_sp._JS666 2
Polaromonas_naphthalenivorans_CJ2 1
Variovorax_paradoxus_S110 1
Acidovorax_ebreus_TPSY 2
Acidovorax_sp._KKS102 2
Acidovorax_sp._JS42 1
Comamonas_testosteroni_CNB-2 1
Herminiimonas_arsenicoxydans 0
Collimonas_fungivorans_Ter331 1
Janthinobacterium_sp._Marseille 0
Pusillimonas_sp._T7-7 0
Bordetella_petrii_DSM_12804 0
Bordetella_parapertussis_12822 0
Bordetella_bronchiseptica_RB50 0
Achromobacter_xylosoxidans_A8 0
Achromobacter_xylosoxidans 0
Thiobacillus_denitrificans_ATCC_25259 1
Sideroxydans_lithotrophicus_ES-1 2
Methylobacillus_flagellatus_KT 1
Rhodobacter_capsulatus_SB_1003 1
Tistrella_mobilis_KA081020-065 1
Azospirillum_lipoferum_4B 1
Azospirillum_sp._B510 1
Azospirillum_brasilense_Sp245 2
Acidiphilium_multivorum_AIU301 0
Acidiphilium_cryptum_JF-5 0
Azorhizobium_caulinodans_ORS_571 1
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1
Mesorhizobium_sp._BNC1 0
Pelagibacterium_halotolerans_B2 0
Bradyrhizobium_japonicum_USDA_110 1
Oceanimonas_sp._GK1 0
Tolumonas_auensis_DSM_9187 0
Aeromonas_veronii_B565 0
Aeromonas_salmonicida_subsp._salmonicida_A449 0
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 0
Aliivibrio_salmonicida_LFI1238 0
Vibrio_fischeri_MJ11 0
Vibrio_sp._Ex25 0
Vibrio_harveyi_ATCC_BAA-1116 0
Vibrio_parahaemolyticus_RIMD_2210633 0
Vibrio_splendidus_LGP32 0
Vibrio_anguillarum_775 0
Vibrio_furnissii_NCTC_11218 0
Vibrio_vulnificus_MO6-24/O 0
Vibrio_cholerae_O395 0
Photobacterium_profundum_SS9 0
Psychromonas_sp._CNPT3 1
Idiomarina_loihiensis_L2TR 1
Ferrimonas_balearica_DSM_9799 0
Shewanella_piezotolerans_WP3 1
Shewanella_loihica_PV-4 1
Shewanella_halifaxensis_HAW-EB4 0
Shewanella_sediminis_HAW-EB3 1
Shewanella_denitrificans_OS217 1
Shewanella_pealeana_ATCC_700345 1
Shewanella_oneidensis_MR-1 1
Shewanella_baltica_OS185 1
Shewanella_woodyi_ATCC_51908 1
Shewanella_sp._MR-4 1
Shewanella_amazonensis_SB2B 1
Shewanella_violacea_DSS12 0
Shewanella_frigidimarina_NCIMB_400 0
Shewanella_putrefaciens_CN-32 1
Colwellia_psychrerythraea_34H 1
Pseudoalteromonas_sp._SM9913 1
Pseudoalteromonas_atlantica_T6c 0
Pseudoalteromonas_haloplanktis_TAC125 1
Glaciecola_sp._4H-3-7+YE-5 0
Glaciecola_nitratireducens_FR1064 0
Marinobacter_adhaerens_HP15 1
Marinobacter_sp._BSs20148 1
Marinobacter_hydrocarbonoclasticus_ATCC_49840 1
Marinobacter_aquaeolei_VT8 1
Alteromonas_sp._SN2 1
Alteromonas_macleodii_str._'Deep_ecotype' 0
Hahella_chejuensis_KCTC_2396 1
Marinomonas_posidonica_IVIA-Po-181 0
Marinomonas_sp._MWYL1 2
Marinomonas_mediterranea_MMB-1 1
Chromohalobacter_salexigens_DSM_3043 2
Halomonas_elongata_DSM_2581 1
Methylomicrobium_alcaliphilum 1
Methylomonas_methanica_MC09 2
Methylococcus_capsulatus_str._Bath 1
Xanthomonas_campestris_pv._campestris_str._B100 0
Spiribacter_sp._UAH-SP71 0
Alkalilimnicola_ehrlichii_MLHE-1 1
Thioalkalivibrio_sulfidophilus_HL-EbGr7 1
Thiocystis_violascens_DSM_198 1
Photorhabdus_asymbiotica 0
Photorhabdus_luminescens_subsp._laumondii_TTO1 0
Xenorhabdus_bovienii_SS-2004 0
Xenorhabdus_nematophila_ATCC_19061 0
Providencia_stuartii_MRSN_2154 0
Proteus_mirabilis_HI4320 0
Edwardsiella_ictaluri_93-146 0
Edwardsiella_tarda_EIB202 1
Rahnella_sp._Y9602 0
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 0
Yersinia_pseudotuberculosis_IP_31758 0
Yersinia_pestis_Pestoides_F 0
Yersinia_enterocolitica_subsp._enterocolitica_8081 0
Serratia_sp._AS12 0
Serratia_sp._ATCC_39006 0
Serratia_plymuthica_AS9 0
Serratia_proteamaculans_568 0
Dickeya_dadantii_Ech703 1
Dickeya_zeae_Ech1591 0
Pectobacterium_wasabiae_WPP163 0
Pectobacterium_sp._SCC3193 0
Pectobacterium_atrosepticum_SCRI1043 0
Pectobacterium_carotovorum_subsp._carotovorum_PC1 0
Sodalis_glossinidius_str._'morsitans' 0
Pantoea_sp._At-9b 0
Pantoea_vagans_C9-1 0
Pantoea_ananatis_LMG_20103 0
Erwinia_tasmaniensis_Et1/99 0
Erwinia_sp._Ejp617 0
Erwinia_billingiae_Eb661 0
Erwinia_pyrifoliae_Ep1/96 0
Erwinia_amylovora_ATCC_49946 0
Escherichia_blattae_DSM_4481 1
Cronobacter_turicensis_z3032 0
Cronobacter_sakazakii_ES15 0
Enterobacteriaceae_bacterium_strain_FGI_57 0
Shigella_sonnei_Ss046 0
Shigella_flexneri_5_str._8401 0
Shigella_dysenteriae_Sd197 0
Shigella_boydii_CDC_3083-94 0
Salmonella_bongori_NCTC_12419 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 1
Klebsiella_oxytoca_E718 0
Klebsiella_variicola_At-22 0
Klebsiella_pneumoniae_NTUH-K2044 0
Enterobacter_aerogenes_KCTC_2190 0
Escherichia_fergusonii_ATCC_35469 0
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 0
Enterobacter_sp._R4-368 0
Enterobacter_sp._638 0
Enterobacter_asburiae_LF7a 0
Enterobacter_cloacae_subsp._dissolvens_SDM 0
Citrobacter_rodentium_ICC168 0
Citrobacter_koseri_ATCC_BAA-895 0
Azotobacter_vinelandii_DJ 1
Pseudomonas_sp._TKP 2
Pseudomonas_sp._UW4 2
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 3
Pseudomonas_entomophila_L48 2
Pseudomonas_syringae_pv._tomato_str._DC3000 1
Pseudomonas_stutzeri_A1501 1
Pseudomonas_fulva_12-X 2
Pseudomonas_putida_F1 2
Pseudomonas_protegens_Pf-5 3
Pseudomonas_fluorescens_SBW25 1
Pseudomonas_mendocina_ymp 2
Pseudomonas_aeruginosa_UCBPP-PA14 3
Pseudomonas_sp._VLB120 2
Acinetobacter_sp._ADP1 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Faecalibacterium_prausnitzii_L2-6 0
Desulfosporosinus_meridiei_DSM_13257 4
Desulfitobacterium_dichloroeliminans_LMG_P-21439 3
Desulfitobacterium_hafniense_DCB-2 4
Desulfotomaculum_gibsoniae_DSM_7213 8
Clostridium_difficile_BI1 3
Clostridium_difficile_R20291 3
Clostridium_difficile_CD196 3
Coprococcus_catus_GD/7 8
Clostridium_sp._SY8519 3
Clostridium_saccharobutylicum_DSM_13864 0
Clostridium_autoethanogenum_DSM_10061 2
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1
Clostridium_kluyveri_NBRC_12016 1
Clostridium_tetani_genome_12124569 0
Clostridium_perfringens_SM101 0
Clostridium_perfringens_str._13 0
Clostridium_pasteurianum_BC1 1
Clostridium_botulinum_H04402_065 1
Clostridium_botulinum_BKT015925 1
Clostridium_botulinum_F_str._230613 1
Clostridium_botulinum_F_str._Langeland 1
Clostridium_botulinum_E3_str._Alaska_E43 0
Clostridium_botulinum_B1_str._Okra 1
Clostridium_botulinum_Ba4_str._657 1
Clostridium_botulinum_A2_str._Kyoto 1
Clostridium_botulinum_A3_str._Loch_Maree 1
Clostridium_botulinum_A_str._Hall 1
Clostridium_botulinum_A_str._ATCC_19397 1
Clostridium_acetobutylicum_DSM_1731 0
Clostridium_acetobutylicum_EA_2018 0
Thermoanaerobacterium_thermosaccharolyticum_M0795 0
Thermacetogenium_phaeum_DSM_12270 1
Thermoanaerobacter_sp._X513 0
Halobacteroides_halobius_DSM_5150 0
Exiguobacterium_antarcticum_B7 0
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 4
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_mucilaginosus_K02 1
Listeria_monocytogenes_EGD_sequence 1
Listeria_monocytogenes_N53-1 1
Listeria_monocytogenes_La111 1
Listeria_monocytogenes_serotype_4b_str._LL195 1
Listeria_monocytogenes_07PF0776 1
Listeria_monocytogenes_M7 1
Listeria_monocytogenes_J1-220 1
Listeria_monocytogenes_J1816 1
Listeria_monocytogenes_SLCC2376 1
Listeria_monocytogenes_SLCC5850 1
Listeria_monocytogenes_ATCC_19117 1
Listeria_monocytogenes_L312 1
Listeria_monocytogenes_SLCC2479 1
Listeria_monocytogenes_SLCC7179 1
Listeria_monocytogenes_SLCC2540 1
Listeria_monocytogenes_SLCC2378 1
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 1
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 1
Listeria_monocytogenes_serotype_7_str._SLCC2482 1
Listeria_monocytogenes_08-5578 1
Listeria_monocytogenes_08-5923 1
Listeria_monocytogenes_L99 1
Listeria_monocytogenes_HCC23 1
Listeria_monocytogenes_10403S 1
Listeria_monocytogenes_J0161 1
Listeria_monocytogenes_Finland_1998 1
Listeria_monocytogenes_FSL_R2-561 1
Listeria_monocytogenes_serotype_4b_str._F2365 1
Listeria_monocytogenes_EGD-e 1
Geobacillus_sp._C56-T3 2
Geobacillus_sp._Y4.1MC1 2
Geobacillus_sp._Y412MC52 3
Geobacillus_sp._Y412MC61 3
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1
Bacillus_amyloliquefaciens_LFB112 1
Bacillus_amyloliquefaciens_CC178 1
Bacillus_amyloliquefaciens_Y2 1
Bacillus_amyloliquefaciens_IT-45 1
Bacillus_amyloliquefaciens_XH7 0
Bacillus_amyloliquefaciens_LL3 0
Bacillus_amyloliquefaciens_TA208 0
Bacillus_amyloliquefaciens_DSM_7 0
Bacillus_licheniformis_9945A 1
Bacillus_subtilis_PY79 1
Bacillus_subtilis_XF-1 1
Bacillus_subtilis_QB928 1
Bacillus_subtilis_BSn5 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 1
Bacillus_subtilis_subsp._subtilis_str._BSP1 0
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1
Bacillus_subtilis_subsp._spizizenii_TU-B-10 1
Bacillus_subtilis_subsp._spizizenii_str._W23 1
Bacillus_subtilis_subsp._natto_BEST195 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1
Bacillus_infantis_NRRL_B-14911 3
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 2
Bacillus_toyonensis_BCT-7112 2
Bacillus_thuringiensis_HD-771 3
Bacillus_thuringiensis_HD-789 3
Bacillus_thuringiensis_MC28 3
Bacillus_thuringiensis_serovar_chinensis_CT-43 3
Bacillus_thuringiensis_YBT-1518 3
Bacillus_thuringiensis_Bt407 3
Bacillus_thuringiensis_serovar_konkukian_str._97-27 3
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 3
Bacillus_thuringiensis_BMB171 3
Bacillus_thuringiensis_serovar_finitimus_YBT-020 3
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 3
Bacillus_cereus_FRI-35 3
Bacillus_cereus_biovar_anthracis_str._CI 3
Bacillus_cereus_AH820 2
Bacillus_cereus_AH187 3
Bacillus_cereus_B4264 3
Bacillus_cereus_G9842 3
Bacillus_cereus_Q1 3
Bacillus_cereus_F837/76 3
Bacillus_cereus_NC7401 3
Bacillus_cereus_E33L 3
Bacillus_cereus_ATCC_14579 4
Bacillus_cereus_ATCC_10987 3
Bacillus_anthracis_str._H9401 3
Bacillus_anthracis_str._CDC_684 3
Bacillus_anthracis_str._'Ames_Ancestor' 3
Bacillus_anthracis_str._Sterne 3
Bacillus_anthracis_str._Ames 3
Bacillus_megaterium_WSH-002 4
Bacillus_megaterium_QM_B1551 4
Bacillus_coagulans_36D1 3
Salinibacter_ruber_DSM_13855 0
Singulisphaera_acidiphila_DSM_18658 1
Spirochaeta_thermophila_DSM_6578 1
Hydrogenobacter_thermophilus_TK-6 0
Leptospirillum_ferriphilum_ML-04 1
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 1
Fusobacterium_nucleatum_subsp._animalis_4_8 1
Acidithiobacillus_ferrooxidans_ATCC_23270 1
Desulfocapsa_sulfexigens_DSM_10523 2
Desulfobacula_toluolica_Tol2 6
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 4
Desulfovibrio_vulgaris_RCH1 5
Desulfovibrio_vulgaris_str._'Miyazaki_F' 3
Desulfovibrio_vulgaris_str._Hildenborough 5
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 1
Desulfovibrio_desulfuricans_ND132 3
Geobacter_sp._M18 2
Geobacter_sulfurreducens_PCA 1
Anaeromyxobacter_sp._K 1
Anaeromyxobacter_dehalogenans_2CP-C 1
Burkholderia_phenoliruptrix_BR3459a 1
Pandoraea_pnomenusa_3kgm 1
Ralstonia_pickettii_12J 0
Ralstonia_solanacearum_FQY_4 0
Ralstonia_solanacearum_Po82 0
Ralstonia_solanacearum_PSI07 0
Ralstonia_solanacearum_CMR15 0
Ralstonia_solanacearum_GMI1000 0
Burkholderia_sp._YI23 1
Burkholderia_sp._CCGE1003 1
Burkholderia_sp._CCGE1001 1
Burkholderia_sp._KJ006 2
Burkholderia_thailandensis_MSMB121 1
Burkholderia_pseudomallei_MSHR305 1
Burkholderia_pseudomallei_NCTC_13179 1
Burkholderia_pseudomallei_BPC006 1
Burkholderia_pseudomallei_1026b 1
Burkholderia_pseudomallei_668 1
Burkholderia_pseudomallei_1710b 1
Burkholderia_pseudomallei_K96243 1
Burkholderia_mallei_NCTC_10229 1
Burkholderia_mallei_NCTC_10247 1
Burkholderia_mallei_ATCC_23344 1
Burkholderia_lata 2
Burkholderia_ambifaria_MC40-6 2
Burkholderia_cenocepacia_MC0-3 2
Burkholderia_cenocepacia_AU_1054 2
Burkholderia_cenocepacia_J2315 2
Burkholderia_multivorans_ATCC_17616 2
Burkholderia_cepacia_GG4 2
Alicycliphilus_denitrificans_BC 0
Variovorax_paradoxus_B4 1
Variovorax_paradoxus_EPS 1
Bordetella_parapertussis_Bpp5 0
Bordetella_bronchiseptica_MO149 0
Bordetella_bronchiseptica_253 0
Sulfuricella_denitrificans_skB26 2
Rhodopseudomonas_palustris_BisB18 0
Bradyrhizobium_sp._S23321 1
Bradyrhizobium_japonicum_USDA_6 1
Aeromonas_hydrophila_ML09-119 0
Vibrio_fischeri_ES114 0
Vibrio_sp._EJY3 1
Vibrio_parahaemolyticus_BB22OP 0
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 0
Vibrio_anguillarum_Listonella_anguillarum_M3 0
Vibrio_nigripulchritudo_VibrioScope 0
Vibrio_vulnificus_CMCP6 0
Vibrio_vulnificus_YJ016 0
Vibrio_cholerae_LMA3984-4 0
Vibrio_cholerae_M66-2 0
Vibrio_cholerae_O395 0
Vibrio_cholerae_IEC224 0
Vibrio_cholerae_O1_str._2010EL-1786 0
Vibrio_cholerae_MJ-1236 0
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 0
Idiomarina_loihiensis_GSL_199 1
Shewanella_sp._W3-18-1 1
Shewanella_sp._ANA-3 1
Shewanella_baltica_BA175 1
Shewanella_baltica_OS678 1
Shewanella_baltica_OS117 1
Shewanella_baltica_OS223 1
Shewanella_baltica_OS195 1
Shewanella_baltica_OS155 1
Shewanella_sp._MR-7 1
Shewanella_putrefaciens_200 1
Glaciecola_psychrophila_170 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 0
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U8' 0
Alteromonas_macleodii_str._'Ionian_Sea_U7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U4' 0
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 0
Alteromonas_macleodii_str._'English_Channel_615' 0
Alteromonas_macleodii_AltDE1 0
Alteromonas_macleodii_str._'English_Channel_673' 0
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 0
Alteromonas_macleodii_str._'Black_Sea_11' 0
Alteromonas_macleodii_ATCC_27126 0
Alcanivorax_dieselolei_B5 2
Xanthomonas_campestris_pv._raphani_756C 0
Xanthomonas_campestris_pv._campestris_str._8004 0
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 0
Thioalkalivibrio_nitratireducens_DSM_14787 2
Proteus_mirabilis_BB2000 0
Morganella_morganii_subsp._morganii_KT 0
Edwardsiella_tarda_C07-087 1
Edwardsiella_tarda_FL6-60 1
Rahnella_aquatilis_HX2 0
Yersinia_pseudotuberculosis_PB1/+ 0
Yersinia_pseudotuberculosis_YPIII 0
Yersinia_pseudotuberculosis_IP_32953 0
Yersinia_pestis_biovar_Microtus_str._91001 0
Yersinia_pestis_A1122 0
Yersinia_pestis_Z176003 0
Yersinia_pestis_D182038 0
Yersinia_pestis_D106004 0
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 0
Yersinia_pestis_Nepal516 0
Yersinia_pestis_Antiqua 0
Yersinia_pestis_Angola 0
Yersinia_pestis_CO92 0
Yersinia_pestis_KIM10+ 0
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 0
Yersinia_enterocolitica_subsp._palearctica_Y11 0
Serratia_sp._AS13 0
Serratia_plymuthica_S13 0
Serratia_plymuthica_4Rx13 0
Serratia_marcescens_FGI94 0
Serratia_marcescens_WW4 0
Serratia_liquefaciens_ATCC_27592 0
Dickeya_dadantii_Ech586 0
Dickeya_dadantii_3937 0
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 0
Pantoea_ananatis_LMG_5342 0
Pantoea_ananatis_PA13 0
Pantoea_ananatis_AJ13355 0
Erwinia_pyrifoliae_DSM_12163 0
Erwinia_amylovora_CFBP1430 0
Cronobacter_sakazakii_CMCC_45402 0
Cronobacter_sakazakii_SP291 0
Cronobacter_sakazakii_ATCC_BAA-894 0
Raoultella_ornithinolytica_B6 0
Shigella_sonnei_53G 0
Shigella_flexneri_2002017 0
Shigella_flexneri_2a_str._2457T 0
Shigella_flexneri_2a_str._301 0
Shigella_dysenteriae_1617 0
Shigella_boydii_Sb227 0
Salmonella_bongori_N268-08 0
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 1
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 1
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 1
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 1
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 1
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 1
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 1
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 1
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 0
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 0
Klebsiella_oxytoca_KCTC_1686 0
Klebsiella_pneumoniae_JM45 0
Klebsiella_pneumoniae_CG43 0
Klebsiella_pneumoniae_KCTC_2242 0
Klebsiella_pneumoniae_342 0
Klebsiella_pneumoniae_subsp._pneumoniae_1084 0
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 0
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 0
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 0
Enterobacter_aerogenes_EA1509E 0
Escherichia_coli_E24377A 0
Escherichia_coli_E._coli_PMV-1 0
Escherichia_coli_JJ1886 0
Escherichia_coli_LY180 0
Escherichia_coli_APEC_O78 0
Escherichia_coli_O7:K1_str._CE10 0
Escherichia_coli_O104:H4_str._2009EL-2050 0
Escherichia_coli_O104:H4_str._2009EL-2071 0
Escherichia_coli_O104:H4_str._2011C-3493 0
Escherichia_coli_NA114 0
Escherichia_coli_P12b 0
Escherichia_coli_str._'clone_D_i2' 0
Escherichia_coli_str._'clone_D_i14' 0
Escherichia_coli_UM146 0
Escherichia_coli_042 0
Escherichia_coli_Xuzhou21 0
Escherichia_coli_IHE3034 0
Escherichia_coli_UMNK88 0
Escherichia_coli_O83:H1_str._NRG_857C 0
Escherichia_coli_ABU_83972 0
Escherichia_coli_KO11FL 0
Escherichia_coli_KO11FL 0
Escherichia_coli_LF82 0
Escherichia_coli_ED1a 0
Escherichia_coli_IAI39 0
Escherichia_coli_UMN026 0
Escherichia_coli_55989 0
Escherichia_coli_S88 0
Escherichia_coli_IAI1 0
Escherichia_coli_W 0
Escherichia_coli_W 0
Escherichia_coli_DH1 0
Escherichia_coli_DH1 0
Escherichia_coli_ATCC_8739 0
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_SMS-3-5 0
Escherichia_coli_SE15 0
Escherichia_coli_SE11 0
Escherichia_coli_APEC_O1 0
Escherichia_coli_O103:H2_str._12009 0
Escherichia_coli_UTI89 0
Escherichia_coli_536 0
Escherichia_coli_HS 0
Escherichia_coli_ETEC_H10407 0
Escherichia_coli_O55:H7_str._RM12579 0
Escherichia_coli_O55:H7_str._CB9615 0
Escherichia_coli_O26:H11_str._11368 0
Escherichia_coli_CFT073 0
Escherichia_coli_O111:H-_str._11128 0
Escherichia_coli_O127:H6_str._E2348/69 0
Escherichia_coli_O157:H7_str._TW14359 0
Escherichia_coli_O157:H7_str._EC4115 0
Escherichia_coli_O157:H7_str._Sakai 0
Escherichia_coli_O157:H7_str._EDL933 0
Escherichia_coli_str._K-12_substr._MDS42 0
Escherichia_coli_BW2952 0
Escherichia_coli_str._K-12_substr._MG1655 0
Escherichia_coli_str._K-12_substr._W3110 0
Escherichia_coli_str._K-12_substr._DH10B 0
Escherichia_coli_B_str._REL606 0
Enterobacter_cloacae_SCF1 0
Enterobacter_cloacae_EcWSU1 0
Enterobacter_cloacae_subsp._cloacae_ENHKU01 0
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 0
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 0
Azotobacter_vinelandii_CA6 1
Azotobacter_vinelandii_CA 1
Pseudomonas_denitrificans_ATCC_13867 0
Pseudomonas_syringae_pv._phaseolicola_1448A 1
Pseudomonas_syringae_pv._syringae_B728a 1
Pseudomonas_stutzeri_CCUG_29243 2
Pseudomonas_stutzeri_DSM_10701 0
Pseudomonas_stutzeri_DSM_4166 1
Pseudomonas_stutzeri_RCH2 1
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 1
Pseudomonas_monteilii_SB3101 2
Pseudomonas_monteilii_SB3078 2
Pseudomonas_putida_H8234 1
Pseudomonas_putida_HB3267 2
Pseudomonas_putida_NBRC_14164 1
Pseudomonas_putida_DOT-T1E 2
Pseudomonas_putida_S16 2
Pseudomonas_putida_BIRD-1 2
Pseudomonas_putida_W619 2
Pseudomonas_putida_ND6 2
Pseudomonas_putida_KT2440 2
Pseudomonas_putida_GB-1 2
Pseudomonas_protegens_CHA0 3
Pseudomonas_poae_RE*1-1-14 0
Pseudomonas_fluorescens_F113 2
Pseudomonas_fluorescens_A506 1
Pseudomonas_fluorescens_R124 1
Pseudomonas_fluorescens_Pf0-1 1
Pseudomonas_resinovorans_NBRC_106553 3
Pseudomonas_mendocina_NK-01 2
Pseudomonas_aeruginosa_SCV20265 2
Pseudomonas_aeruginosa_MTB-1 1
Pseudomonas_aeruginosa_LES431 2
Pseudomonas_aeruginosa_RP73 2
Pseudomonas_aeruginosa_B136-33 2
Pseudomonas_aeruginosa_PA1R 1
Pseudomonas_aeruginosa_PA1 2
Pseudomonas_aeruginosa_DK2 2
Pseudomonas_aeruginosa_NCGM2.S1 2
Pseudomonas_aeruginosa_M18 2
Pseudomonas_aeruginosa_LESB58 2
Pseudomonas_aeruginosa_PA7 2
Pseudomonas_aeruginosa_PAO1 2
Acinetobacter_johnsonii__SH046 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 0
NCBI_plasmid_sequences_(Plasmids) 11
TargetDB__(Targets) 11
STRING_v9.0.5_(STRING) 360
Uniprot_2018_03_genome 46362
NCBI_2017_08_genome 29839

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]