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Domain combinations for 55785,55785,55781,55785,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Thermobaculum_terrenum_ATCC_BAA-798 0
Niastella_koreensis_GR20-10 0
Desulfobulbus_propionicus_DSM_2032 0
Geobacter_uraniireducens_Rf4 0
Pelobacter_propionicus_DSM_2379 0
Herminiimonas_arsenicoxydans 0
Methylobacterium_sp._4-46 0
Sinorhizobium_medicae_WSM419 0
Mesorhizobium_opportunistum_WSM2075 0
Rhodomicrobium_vannielii_ATCC_17100 0
Methylocystis_sp._SC2 1
Methanocella_arvoryzae_MRE50 0
Methanosphaerula_palustris_E1-9c 0
Methanoplanus_petrolearius_DSM_11571 0
Methanoculleus_bourgensis_MS2 1
Methanoculleus_marisnigri_JR1 1

Strains
Genome     Number
Oscillatoria_acuminata_PCC_6304 0
Cyanothece_sp._PCC_7822 0
Cyanothece_sp._PCC_7425 0
Cyanothece_sp._PCC_7424 0
Psychroflexus_torquis_ATCC_700755 0
Methanoregula_formicica_Methanoregula_formicicum_SMSP 0

Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 0
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 234
NCBI_2017_08_genome 20

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