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Home > SCOP hierarchy > Domain combination - 55874,54211,_gap_,56719

Domain combinations for 55874,54211,_gap_,56719 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
54211 - Ribosomal protein S5 domain 2-like
56719 - Type II DNA topoisomerase

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Pan_troglodytes_76_2.1.4 (Chimpanzee) 0

Gorilla_gorilla_76_3.1 (Western gorilla) 0

Pongo_abelii_76_2 (Sumatran orangutan) 0

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 0

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 0

Microcebus_murinus_76_1 (Gray mouse lemur) 0

Sorex_araneus_76_1 (European shrew) 0

Caenorhabditis_remanei_ 1

Entamoeba_invadens_1.2 1

Arabidopsis_thaliana_10 (Thale cress) 0

Neospora_caninum 1

Theileria_parva__ 0

Plasmodium_vivax_SaI-1_7.0 0

Plasmodium_yoelii_ssp._yoelii_1_ 0

Plasmodium_chabaudi_ 0

Plasmodium_berghei_ANKA_ 0

Conexibacter_woesei_DSM_14684 1

Waddlia_chondrophila_WSU_86-1044 1

Candidatus_Protochlamydia_amoebophila_UWE25 1

Parachlamydia_acanthamoebae_UV-7 1

Simkania_negevensis_Z 1

Chlamydophila_pecorum_E58 1

Chlamydia_muridarum_Nigg 1

Chlamydophila_pneumoniae_TW-183 1

Chlamydophila_caviae_GPIC 1

Chlamydophila_felis_Fe/C-56 1

Chlamydophila_abortus_S26/3 1

Chlamydia_psittaci_01DC11 1

Chlamydia_trachomatis_B/Jali20/OT 1

Phycisphaera_mikurensis_NBRC_102666 1

Isosphaera_pallida_ATCC_43644 1

Planctomyces_brasiliensis_DSM_5305 1

Planctomyces_limnophilus_DSM_3776 1

Rhodopirellula_baltica_SH_1 0

Pirellula_staleyi_DSM_6068 1

Methylacidiphilum_infernorum_V4 1

Coraliomargarita_akajimensis_DSM_45221 1

Opitutus_terrae_PB90-1 1

Akkermansia_muciniphila_ATCC_BAA-835 1

Thermodesulfatator_indicus_DSM_15286 1

Thermodesulfobacterium_sp._OPB45 1

Desulfurispirillum_indicum_S5 1

Calditerrivibrio_nitroreducens_DSM_19672 1

Denitrovibrio_acetiphilus_DSM_12809 1

Deferribacter_desulfuricans_SSM1 1

Flexistipes_sinusarabici_DSM_4947 1

Sulfurihydrogenibium_sp._YO3AOP1 1

Sulfurihydrogenibium_azorense_Az-Fu1 1

Persephonella_marina_EX-H1 1

Hydrogenobaculum_sp._SN 1

Hydrogenobaculum_sp._HO 1

Hydrogenobaculum_sp._Y04AAS1 1

Thermocrinis_albus_DSM_14484 1

Aquifex_aeolicus_VF5 1

Hydrogenobacter_thermophilus_TK-6 1

Elusimicrobium_minutum_Pei191 1

uncultured_Termite_group_1_bacterium_phylotype_Rs-D17 1

Candidatus_Chloracidobacterium_thermophilum_B 1

Candidatus_Solibacter_usitatus_Ellin6076 1

Granulicella_tundricola_MP5ACTX9 1

Granulicella_mallensis_MP5ACTX8 1

Candidatus_Koribacter_versatilis_Ellin345 1

Terriglobus_saanensis_SP1PR4 1

Terriglobus_roseus_DSM_18391 0

Acidobacterium_capsulatum_ATCC_51196 1

Thermodesulfovibrio_yellowstonii_DSM_11347 1

Candidatus_Nitrospira_defluvii 1

Leptospirillum_ferrooxidans_C2-3 1

Candidatus_Methylomirabilis_oxyfera 1

Acidithiobacillus_ferrivorans_SS3 1

Acidithiobacillus_caldus_SM-1 1

Acidithiobacillus_ferrooxidans_ATCC_53993 1

Bacteriovorax_marinus_SJ 1

Bdellovibrio_bacteriovorus_HD100 1

Nautilia_profundicola_AmH 1

Nitratifractor_salsuginis_DSM_16511 1

Sulfurospirillum_deleyianum_DSM_6946 1

Sulfurospirillum_barnesii_SES-3 1

Arcobacter_sp._L 1

Arcobacter_nitrofigilis_DSM_7299 1

Arcobacter_butzleri_RM4018 1

Campylobacter_hominis_ATCC_BAA-381 1

Campylobacter_lari_RM2100 1

Campylobacter_curvus_525.92 1

Campylobacter_concisus_13826 1

Campylobacter_jejuni_subsp._doylei_269.97 1

Campylobacter_sp._03-427 1

Campylobacter_fetus_subsp._fetus_82-40 1

uncultured_Sulfuricurvum_sp._RIFRC-1 1

Sulfuricurvum_kujiense_DSM_16994 1

Sulfurimonas_autotrophica_DSM_16294 1

Sulfurimonas_denitrificans_DSM_1251 1

Wolinella_succinogenes_DSM_1740 1

Helicobacter_cetorum_MIT_00-7128 1

Helicobacter_bizzozeronii_CIII-1 1

Helicobacter_hepaticus_ATCC_51449 1

Helicobacter_mustelae_12198 1

Helicobacter_felis_ATCC_49179 1

Helicobacter_cinaedi_PAGU611 1

Helicobacter_acinonychis_str._Sheeba 1

Helicobacter_pylori_B38 1

Nitratiruptor_sp._SB155-2 1

Sulfurovum_sp._NBC37-1 1

Desulfarculus_baarsii_DSM_2075 1

Syntrophus_aciditrophicus_SB 1

Desulfomonile_tiedjei_DSM_6799 1

Syntrophobacter_fumaroxidans_MPOB 1

Desulfurivibrio_alkaliphilus_AHT2 1

Desulfotalea_psychrophila_LSv54 1

Desulfobulbus_propionicus_DSM_2032 1

Desulfatibacillum_alkenivorans_AK-01 1

Desulfobacterium_autotrophicum_HRM2 1

Desulfohalobium_retbaense_DSM_5692 1

Desulfomicrobium_baculatum_DSM_4028 1

Desulfovibrio_piezophilus 1

Desulfovibrio_aespoeensis_Aspo-2 1

Lawsonia_intracellularis_PHE/MN1-00 1

Desulfovibrio_magneticus_RS-1 1

Desulfovibrio_alaskensis_G20 1

Desulfovibrio_vulgaris_subsp._vulgaris_DP4 1

Desulfovibrio_salexigens_DSM_2638 1

Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1

Desulfovibrio_africanus_str._Walvis_Bay 1

Hippea_maritima_DSM_10411 1

Geobacter_daltonii_FRC-32 1

Geobacter_sp._M21 1

Geobacter_uraniireducens_Rf4 1

Geobacter_lovleyi_SZ 1

Geobacter_bemidjiensis_Bem 1

Geobacter_sulfurreducens_KN400 1

Geobacter_metallireducens_GS-15 1

Pelobacter_propionicus_DSM_2379 1

Pelobacter_carbinolicus_DSM_2380 1

Babela_massiliensis 1

Haliangium_ochraceum_DSM_14365 1

Sorangium_cellulosum_'So_ce_56' 1

Anaeromyxobacter_sp._Fw109-5 1

Anaeromyxobacter_dehalogenans_2CP-1 1

Stigmatella_aurantiaca_DW4/3-1 1

Corallococcus_coralloides_DSM_2259 1

Myxococcus_xanthus_DK_1622 1

Myxococcus_fulvus_HW-1 1

Dechloromonas_aromatica_RCB 1

Thauera_sp._MZ1T 1

Azoarcus_sp._KH32C 1

Azoarcus_sp._BH72 1

Aromatoleum_aromaticum_EbN1 1

Dechlorosoma_suillum_PS 1

Pseudogulbenkiania_sp._NH8B 1

Laribacter_hongkongensis_HLHK9 1

Chromobacterium_violaceum_ATCC_12472 1

Neisseria_meningitidis_alpha14 1

Neisseria_meningitidis_FAM18 1

Neisseria_lactamica_020-06 1

Neisseria_gonorrhoeae_NCCP11945 0

syncytium_symbiont_of_Diaphorina_citri 1

Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 1

beta_proteobacterium_CB 1

Methylibium_petroleiphilum_PM1 0

Thiomonas_arsenitoxydans 1

Thiomonas_intermedia_K12 1

Rubrivivax_gelatinosus_IL144 1

Leptothrix_cholodnii_SP-6 0

Burkholderia_rhizoxinica_HKI_454 0

Burkholderia_phytofirmans_PsJN 1

Burkholderia_phymatum_STM815 1

Burkholderia_xenovorans_LB400 1

Ralstonia_eutropha_JMP134 1

Cupriavidus_taiwanensis_LMG_19424 1

Cupriavidus_metallidurans_CH34 1

Cupriavidus_necator_N-1 1

Ralstonia_eutropha_H16 1

Ralstonia_pickettii_12D 1

Ralstonia_solanacearum_CFBP2957 1

Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 1

Burkholderia_sp._RPE64 1

Burkholderia_sp._CCGE1002 1

Burkholderia_thailandensis_E264 1

Burkholderia_pseudomallei_1106a 1

Burkholderia_mallei_SAVP1 1

Burkholderia_ambifaria_AMMD 1

Burkholderia_cenocepacia_HI2424 1

Burkholderia_multivorans_ATCC_17616 1

Burkholderia_vietnamiensis_G4 1

Burkholderia_gladioli_BSR3 1

Burkholderia_glumae_BGR1 1

Verminephrobacter_eiseniae_EF01-2 1

Alicycliphilus_denitrificans_K601 1

Ramlibacter_tataouinensis_TTB310 0

Delftia_sp._Cs1-4 1

Delftia_acidovorans_SPH-1 1

Polaromonas_sp._JS666 0

Polaromonas_naphthalenivorans_CJ2 0

Variovorax_paradoxus_S110 0

Rhodoferax_ferrireducens_T118 0

Acidovorax_ebreus_TPSY 1

Acidovorax_sp._KKS102 0

Acidovorax_sp._JS42 1

Acidovorax_citrulli_AAC00-1 0

Acidovorax_avenae_subsp._avenae_ATCC_19860 0

Comamonas_testosteroni_CNB-2 1

Candidatus_Zinderia_insecticola_CARI 1

Herminiimonas_arsenicoxydans 1

Collimonas_fungivorans_Ter331 1

Janthinobacterium_sp._Marseille 1

Herbaspirillum_seropedicae_SmR1 1

Pusillimonas_sp._T7-7 1

Taylorella_asinigenitalis_MCE3 1

Taylorella_equigenitalis_MCE9 1

Bordetella_petrii_DSM_12804 1

Bordetella_avium_197N 1

Bordetella_pertussis_Tohama_I 1

Bordetella_parapertussis_12822 1

Bordetella_bronchiseptica_RB50 1

Achromobacter_xylosoxidans_A8 1

Achromobacter_xylosoxidans 1

Nitrosospira_multiformis_ATCC_25196 1

Nitrosomonas_sp._Is79A3 1

Nitrosomonas_eutropha_C91 1

Nitrosomonas_europaea_ATCC_19718 1

Sideroxydans_lithotrophicus_ES-1 1

Gallionella_capsiferriformans_ES-2 1

Methylotenera_versatilis_301 1

Methylotenera_mobilis_JLW8 1

Methylovorus_sp._MP688 1

Methylovorus_glucosetrophus_SIP3-4 1

Methylobacillus_flagellatus_KT 1

Magnetococcus_marinus_MC-1 1

Parvularcula_bermudensis_HTCC2503 1

Asticcacaulis_excentricus_CB_48 1

Brevundimonas_subvibrioides_ATCC_15264 1

Caulobacter_sp._K31 1

Caulobacter_crescentus_NA1000 1

Phenylobacterium_zucineum_HLK1 1

Erythrobacter_litoralis_HTCC2594 1

Sphingopyxis_alaskensis_RB2256 1

Novosphingobium_sp._PP1Y 1

Novosphingobium_aromaticivorans_DSM_12444 1

Sphingobium_sp._SYK-6 1

Sphingobium_japonicum_UT26S 1

Sphingobium_chlorophenolicum_L-1 1

Sphingomonas_sp._MM-1 1

Sphingomonas_wittichii_RW1 1

Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 1

Maricaulis_maris_MCS10 1

Hirschia_baltica_ATCC_49814 1

Hyphomonas_neptunium_ATCC_15444 1

Dinoroseobacter_shibae_DFL_12 1

Phaeobacter_gallaeciensis_2.10 1

Pseudovibrio_sp._FO-BEG1 1

Jannaschia_sp._CCS1 1

Ruegeria_sp._TM1040 1

Ruegeria_pomeroyi_DSS-3 1

Ketogulonicigenium_vulgare_Y25 1

Ketogulonigenium_vulgarum_WSH-001 1

Roseobacter_litoralis_Och_149 1

Roseobacter_denitrificans_OCh_114 1

Rhodobacter_sphaeroides_ATCC_17029 1

Rhodobacter_capsulatus_SB_1003 1

Paracoccus_denitrificans_PD1222 1

Rhodospirillum_photometricum_DSM_122 1

Tistrella_mobilis_KA081020-065 1

Magnetospirillum_magneticum_AMB-1 1

Rhodospirillum_centenum_SW 1

Rhodospirillum_rubrum_F11 1

Azospirillum_lipoferum_4B 1

Azospirillum_sp._B510 1

Azospirillum_brasilense_Sp245 1

Gluconacetobacter_xylinus_NBRC_3288 0

Granulibacter_bethesdensis_CGDNIH1 1

Gluconacetobacter_diazotrophicus_PAl_5 1

Acidiphilium_multivorum_AIU301 1

Acidiphilium_cryptum_JF-5 1

Gluconobacter_oxydans_621H 1

Acetobacter_pasteurianus_IFO_3283-01 1

Polymorphum_gilvum_SL003B-26A1 1

Micavibrio_aeruginosavorus_ARL-13 1

Candidatus_Puniceispirillum_marinum_IMCC1322 1

alpha_proteobacterium_HIMB59 1

Candidatus_Midichloria_mitochondrii_IricVA 1

Neorickettsia_sennetsu_str._Miyayama 1

Neorickettsia_risticii_str._Illinois 1

Wolbachia_endosymbiont_of_Culex_quinquefasciatus_Pel 1

Wolbachia_sp._wRi 1

Ehrlichia_chaffeensis_str._Arkansas 1

Ehrlichia_canis_str._Jake 1

Ehrlichia_ruminantium_str._Gardel 1

Anaplasma_phagocytophilum_HZ 1

Anaplasma_marginale_str._Florida 1

Anaplasma_centrale_str._Israel 1

Orientia_tsutsugamushi_str._Boryong 1

Rickettsia_bellii_OSU_85-389 1

Rickettsia_canadensis_str._McKiel 1

Rickettsia_typhi_str._Wilmington 1

Rickettsia_prowazekii_str._BuV67-CWPP 1

Rickettsia_philipii_str._364D 1

Rickettsia_heilongjiangensis_054 1

Rickettsia_peacockii_str._Rustic 1

Rickettsia_felis_URRWXCal2 1

Rickettsia_slovaca_13-B 1

Rickettsia_parkeri_str._Portsmouth 1

Rickettsia_massiliae_MTU5 1

Rickettsia_japonica_YH 1

Rickettsia_africae_ESF-5 1

Rickettsia_rhipicephali_str._3-7-female6-CWPP 1

Rickettsia_montanensis_str._OSU_85-930 1

Candidatus_Rickettsia_amblyommii_str._GAT-30V 1

Rickettsia_australis_str._Cutlack 1

Rickettsia_akari_str._Hartford 1

Rickettsia_rickettsii_str._'Sheila_Smith' 1

Rickettsia_conorii_str._Malish_7 1

Starkeya_novella_DSM_506 1

Xanthobacter_autotrophicus_Py2 1

Azorhizobium_caulinodans_ORS_571 1

Methylobacterium_chloromethanicum_CM4 1

Methylobacterium_extorquens_AM1 2

Methylobacterium_sp._4-46 1

Methylobacterium_populi_BJ001 1

Methylobacterium_nodulans_ORS_2060 1

Methylobacterium_radiotolerans_JCM_2831 1

Parvibaculum_lavamentivorans_DS-1 1

Ochrobactrum_anthropi_ATCC_49188 1

Brucella_microti_CCM_4915 1

Brucella_pinnipedialis_B2/94 1

Brucella_canis_ATCC_23365 1

Brucella_suis_ATCC_23445 1

Brucella_melitensis_ATCC_23457 1

Brucella_ovis_ATCC_25840 1

Brucella_abortus_S19 1

Sinorhizobium_fredii_NGR234 1

Sinorhizobium_medicae_WSM419 1

Sinorhizobium_meliloti_AK83 1

Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1

Rhizobium_etli_CIAT_652 1

Rhizobium_leguminosarum_bv._viciae_3841 1

Agrobacterium_tumefaciens_str._C58 1

Agrobacterium_radiobacter_K84 1

Agrobacterium_sp._H13-3 1

Agrobacterium_vitis_S4 1

Candidatus_Liberibacter_asiaticus_str._psy62 1

Mesorhizobium_sp._BNC1 1

Mesorhizobium_opportunistum_WSM2075 1

Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1

Mesorhizobium_loti_MAFF303099 1

Methylocella_silvestris_BL2 1

Beijerinckia_indica_subsp._indica_ATCC_9039 1

Pelagibacterium_halotolerans_B2 1

Rhodomicrobium_vannielii_ATCC_17100 1

Hyphomicrobium_sp._MC1 1

Hyphomicrobium_denitrificans_ATCC_51888 1

Oligotropha_carboxidovorans_OM4 1

Rhodopseudomonas_palustris_BisA53 1

Nitrobacter_winogradskyi_Nb-255 1

Nitrobacter_hamburgensis_X14 1

Bradyrhizobium_japonicum_USDA_110 1

Bradyrhizobium_sp._ORS_278 1

Methylocystis_sp._SC2 1

Bartonella_tribocorum_CIP_105476 1

Bartonella_clarridgeiae_73 1

Bartonella_henselae_str._Houston-1 1

Bartonella_grahamii_as4aup 1

Bartonella_quintana_str._Toulouse 1

Bartonella_bacilliformis_KC583 1

Saccharophagus_degradans_2-40 1

Teredinibacter_turnerae_T7901 1

Cellvibrio_japonicus_Ueda107 1

Aggregatibacter_aphrophilus_NJ8700 1

Aggregatibacter_actinomycetemcomitans_D7S-1 1

Haemophilus_somnus_129PT 1

Gallibacterium_anatis_UMN179 1

Pasteurella_multocida_subsp._multocida_str._3480 1

Haemophilus_parasuis_SH0165 1

Haemophilus_ducreyi_35000HP 1

Haemophilus_parainfluenzae_T3T1 1

Haemophilus_influenzae_PittEE 1

Actinobacillus_succinogenes_130Z 1

Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1

Oceanimonas_sp._GK1 1

Tolumonas_auensis_DSM_9187 1

Aeromonas_veronii_B565 1

Aeromonas_salmonicida_subsp._salmonicida_A449 1

Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1

Aliivibrio_salmonicida_LFI1238 1

Vibrio_fischeri_MJ11 1

Vibrio_sp._Ex25 1

Vibrio_harveyi_ATCC_BAA-1116 1

Vibrio_parahaemolyticus_RIMD_2210633 1

Vibrio_splendidus_LGP32 1

Vibrio_anguillarum_775 1

Vibrio_furnissii_NCTC_11218 1

Vibrio_vulnificus_MO6-24/O 1

Vibrio_cholerae_O395 1

Photobacterium_profundum_SS9 1

Psychromonas_ingrahamii_37 1

Psychromonas_sp._CNPT3 1

Idiomarina_loihiensis_L2TR 1

Ferrimonas_balearica_DSM_9799 1

Shewanella_piezotolerans_WP3 1

Shewanella_loihica_PV-4 1

Shewanella_halifaxensis_HAW-EB4 1

Shewanella_sediminis_HAW-EB3 1

Shewanella_denitrificans_OS217 1

Shewanella_pealeana_ATCC_700345 1

Shewanella_oneidensis_MR-1 1

Shewanella_baltica_OS185 1

Shewanella_woodyi_ATCC_51908 1

Shewanella_sp._MR-4 1

Shewanella_amazonensis_SB2B 1

Shewanella_violacea_DSS12 1

Shewanella_frigidimarina_NCIMB_400 1

Shewanella_putrefaciens_CN-32 1

Colwellia_psychrerythraea_34H 1

Pseudoalteromonas_sp._SM9913 1

Pseudoalteromonas_atlantica_T6c 1

Pseudoalteromonas_haloplanktis_TAC125 1

Glaciecola_sp._4H-3-7+YE-5 1

Glaciecola_nitratireducens_FR1064 1

Marinobacter_adhaerens_HP15 1

Marinobacter_sp._BSs20148 1

Marinobacter_hydrocarbonoclasticus_ATCC_49840 1

Marinobacter_aquaeolei_VT8 1

Alteromonas_sp._SN2 1

Alteromonas_macleodii_str._'Deep_ecotype' 1

Kangiella_koreensis_DSM_16069 1

Hahella_chejuensis_KCTC_2396 1

Alcanivorax_borkumensis_SK2 1

Marinomonas_posidonica_IVIA-Po-181 1

Marinomonas_sp._MWYL1 1

Marinomonas_mediterranea_MMB-1 1

Chromohalobacter_salexigens_DSM_3043 1

Halomonas_elongata_DSM_2581 1

Methylomicrobium_alcaliphilum 1

Methylomonas_methanica_MC09 1

Methylococcus_capsulatus_str._Bath 1

Dichelobacter_nodosus_VCS1703A 1

Rhodanobacter_denitrificans 1

Frateuria_aurantia_DSM_6220 1

Pseudoxanthomonas_spadix_BD-a59 1

Pseudoxanthomonas_suwonensis_11-1 1

Stenotrophomonas_maltophilia_K279a 1

Xylella_fastidiosa_M23 1

Xanthomonas_axonopodis_pv._citri_str._306 1

Xanthomonas_albilineans_GPE_PC73 1

Xanthomonas_oryzae_pv._oryzae_PXO99A 1

Xanthomonas_campestris_pv._campestris_str._B100 1

Halothiobacillus_neapolitanus_c2 1

Spiribacter_sp._UAH-SP71 1

Alkalilimnicola_ehrlichii_MLHE-1 1

Thioalkalivibrio_sulfidophilus_HL-EbGr7 1

Thioalkalivibrio_sp._K90mix 1

Halorhodospira_halophila_SL1 1

Thiocystis_violascens_DSM_198 1

Nitrosococcus_watsonii_C-113 1

Nitrosococcus_halophilus_Nc4 1

Nitrosococcus_oceani_ATCC_19707 1

Coxiella_burnetii_Dugway_5J108-111 1

Legionella_longbeachae_NSW150 1

Legionella_pneumophila_str._Corby 1

Baumannia_cicadellinicola_str._Hc_(Homalodisca_coagulata) 1

gamma_proteobacterium_HdN1 1

Candidatus_Ruthia_magnifica_str._Cm_(Calyptogena_magnifica) 1

Candidatus_Vesicomyosocius_okutanii_HA 1

Photorhabdus_asymbiotica 1

Photorhabdus_luminescens_subsp._laumondii_TTO1 1

Xenorhabdus_bovienii_SS-2004 1

Xenorhabdus_nematophila_ATCC_19061 1

Providencia_stuartii_MRSN_2154 1

Proteus_mirabilis_HI4320 1

Edwardsiella_ictaluri_93-146 1

Edwardsiella_tarda_EIB202 1

Rahnella_sp._Y9602 1

Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1

Yersinia_pseudotuberculosis_IP_31758 1

Yersinia_pestis_Pestoides_F 1

Yersinia_enterocolitica_subsp._enterocolitica_8081 1

Serratia_sp._AS12 1

Serratia_symbiotica_str._'Cinara_cedri' 1

Serratia_sp._ATCC_39006 1

Serratia_plymuthica_AS9 1

Serratia_proteamaculans_568 1

Dickeya_dadantii_Ech703 1

Dickeya_zeae_Ech1591 1

Pectobacterium_wasabiae_WPP163 1

Pectobacterium_sp._SCC3193 1

Pectobacterium_atrosepticum_SCRI1043 1

Pectobacterium_carotovorum_subsp._carotovorum_PC1 1

Sodalis_glossinidius_str._'morsitans' 1

Halyomorpha_halys_symbiont 1

Pantoea_sp._At-9b 1

Pantoea_vagans_C9-1 1

Pantoea_ananatis_LMG_20103 1

Wigglesworthia_glossinidia_endosymbiont_of_Glossina_brevipalpis 1

Buchnera_aphidicola_BCc 1

Erwinia_tasmaniensis_Et1/99 1

Erwinia_sp._Ejp617 1

Erwinia_billingiae_Eb661 1

Erwinia_pyrifoliae_Ep1/96 1

Erwinia_amylovora_ATCC_49946 1

Escherichia_blattae_DSM_4481 1

Candidatus_Moranella_endobia_PCIT 1

Cronobacter_turicensis_z3032 1

Cronobacter_sakazakii_ES15 1

Candidatus_Riesia_pediculicola_USDA 1

secondary_endosymbiont_of_Ctenarytaina_eucalypti 1

Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 1

Candidatus_Blochmannia_floridanus 1

Enterobacteriaceae_bacterium_strain_FGI_57 1

Shigella_sonnei_Ss046 1

Shigella_flexneri_5_str._8401 1

Shigella_dysenteriae_Sd197 1

Shigella_boydii_CDC_3083-94 1

Salmonella_bongori_NCTC_12419 1

Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 1

Klebsiella_oxytoca_E718 1

Klebsiella_variicola_At-22 1

Klebsiella_pneumoniae_NTUH-K2044 1

Enterobacter_aerogenes_KCTC_2190 1

Escherichia_fergusonii_ATCC_35469 1

Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1

Enterobacter_sp._R4-368 1

Enterobacter_sp._638 1

Enterobacter_asburiae_LF7a 1

Enterobacter_cloacae_subsp._dissolvens_SDM 1

Citrobacter_rodentium_ICC168 1

Citrobacter_koseri_ATCC_BAA-895 1

Azotobacter_vinelandii_DJ 1

Pseudomonas_sp._TKP 1

Pseudomonas_sp._UW4 1

Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1

Pseudomonas_entomophila_L48 1

Pseudomonas_syringae_pv._tomato_str._DC3000 1

Pseudomonas_stutzeri_A1501 1

Pseudomonas_fulva_12-X 1

Pseudomonas_putida_F1 1

Pseudomonas_protegens_Pf-5 1

Pseudomonas_fluorescens_SBW25 1

Pseudomonas_mendocina_ymp 1

Pseudomonas_aeruginosa_UCBPP-PA14 1

Pseudomonas_sp._VLB120 1

Psychrobacter_sp._G 1

Psychrobacter_sp._PRwf-1 1

Psychrobacter_arcticus_273-4 1

Psychrobacter_cryohalolentis_K5 1

Moraxella_catarrhalis_RH4 1

Acinetobacter_oleivorans_DR1 1

Acinetobacter_calcoaceticus_PHEA-2 1

Acinetobacter_baumannii_ATCC_17978 1

Acinetobacter_sp._ADP1 1

Methylophaga_sp._JAM1 1

Cycloclasticus_sp._P1 1

Thiomicrospira_crunogena_XCL-2 1

Thioalkalimicrobium_cyclicum_ALM1 1

Francisella_noatunensis_subsp._orientalis_str._Toba_04 1

Francisella_sp._TX077308 1

Francisella_philomiragia_subsp._philomiragia_ATCC_25017 1

Francisella_tularensis_subsp._tularensis_WY96-3418 1

Francisella_cf._novicida_3523 1

Francisella_novicida_U112 1

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Longest transcript per gene
Genome Number

Pan_troglodytes_69_2.1.4 (Chimpanzee) 0

Gorilla_gorilla_69_3.1 (Western gorilla) 0

Pongo_abelii_69_2 (Sumatran orangutan) 0

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 0

Microcebus_murinus_69_1 (Gray mouse lemur) 0

Felis_catus_69 (Domestic cat) 0

Sorex_araneus_69_1 (European shrew) 0

Arabidopsis_thaliana_10 (Thale cress) 0

Others
Genome Number

Wolbachia_endosymbiont_of_Brugia_malayi_v1.0_(Broad_Institute) 1

Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1

NCBI_plasmid_sequences_(Plasmids) 2

Protozoadb_2010_08_(Protozoadb) 0

TargetDB__(Targets) 18

STRING_v9.0.5_(STRING) 504

Uniprot_2018_03_genome 94300

NCBI_2017_08_genome 45798

NCBI_viral_sequences_(Viral) 0

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Domain combinations for 55874,54211,_gap_,56719 superfamilies in groups of genomes