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Home > SCOP hierarchy > Domain combination - 55874,_gap_,54211,_gap_,110942

Domain combinations for 55874,_gap_,54211,_gap_,110942 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
54211 - Ribosomal protein S5 domain 2-like
110942 - HSP90 C-terminal domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 5

Pan_troglodytes_76_2.1.4 (Chimpanzee) 2

Gorilla_gorilla_76_3.1 (Western gorilla) 2

Pongo_abelii_76_2 (Sumatran orangutan) 2

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 1

Papio_anubis_76 (Olive baboon) 2

Macaca_mulatta_76_1 (Rhesus monkey) 1

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 1

Otolemur_garnettii_76_3 (Small-eared galago) 2

Microcebus_murinus_76_1 (Gray mouse lemur) 0

Rattus_norvegicus_76_5.0 (Norway rat) 4

Mus_musculus_76_38 (House mouse) 3

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 1

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 4

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 2

Cavia_porcellus_76_3 (Domestic guinea pig) 2

Oryctolagus_cuniculus_76_2 (Rabbit) 2

Ochotona_princeps_76 (American pika) 0

Tupaia_belangeri_76 (Northern tree shrew) 0

Sus_scrofa_76_10.2 (Pig) 1

Bos_taurus_76_3.1 (Cattle) 3

Ovis_aries_76_3.1 (Sheep) 2

Vicugna_pacos_76_1 (Alpaca) 0

Tursiops_truncatus_76_1 (Bottlenose dolphin) 1

Mustela_putorius_furo_76_1.0 (Domestic ferret) 2

Ailuropoda_melanoleuca_76_1 (Giant panda) 1

Canis_familiaris_76_3.1 (Dog) 2

Felis_catus_76_6.2 (Domestic cat) 2

Equus_caballus_76_2 (Horse) 2

Myotis_lucifugus_76_2.0 (Little brown bat) 2

Pteropus_vampyrus_76_1 (Large flying fox) 1

Sorex_araneus_76_1 (European shrew) 1

Erinaceus_europaeus_76 (Western European hedgehog) 0

Procavia_capensis_76_1 (Cape rock hyrax) 0

Loxodonta_africana_76_3 (African savanna elephant) 3

Echinops_telfairi_76 (Small Madagascar hedgehog) 0

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 0

Choloepus_hoffmanni_76_1 (Hoffmann's two-fingered sloth) 0

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 3

Monodelphis_domestica_76_5 (Gray short-tailed opossum) 0

Ornithorhynchus_anatinus_76_5 (Platypus) 1

Saccoglossus_kowalevskii_v3.0 2

Petromyzon_marinus_76_7.0 (Sea lamprey) 1

Meleagris_gallopavo_76_2 (Turkey) 2

Gallus_gallus_76_4 (Chicken) 1

Anas_platyrhynchos_76_1.0 (Mallard) 1

Taeniopygia_guttata_76_3.2.4 (Zebra finch) 1

Ficedula_albicollis_76_1.0 (Collared flycatcher) 2

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 2

Anolis_carolinensis_76_2.0 (Green anole) 2

Xenopus_laevis_ (African clawed frog) 5

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 5

Latimeria_chalumnae_76_1 (Coelacanth) 4

Lepisosteus_oculatus_76 (Spotted gar) 4

Gadus_morhua_76_1 (Atlantic cod) 3

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 1

Takifugu_rubripes_76_4 (Torafugu) 2

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 3

Oryzias_latipes_76_1 (Japanese medaka) 2

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 3

Poecilia_formosa_76 (Amazon molly) 3

Oreochromis_niloticus_76_1.0 (Nile tilapia) 2

Astyanax_mexicanus_76 (Mexican tetra) 3

Danio_rerio_76_9 (Zebrafish) 2

Oikopleura_dioica 0

Ciona_savignyi_76_2.0 (Pacific transparent sea squirt) 8

Ciona_intestinalis_76 (Vase tunicate) 0

Strongylocentrotus_purpuratus_v3.1 (Purple sea urchin) 0

Adineta_vaga 1

Octopus_bimaculoides_280 0

Crassostrea_gigas_22 (Pacific oyster) 1

Lottia_gigantea_ (Owl limpet) 1

Helobdella_robusta_ 0

Capitella_sp._I_ 1

Danaus_plexippus_OGS1.0 (Monarch butterfly) 1

Heliconius_melpomene_ (Postman butterfly) 1

Bombyx_mori_ (Domestic silkworm) 2

Nasonia_vitripennis_ (Jewel wasp) 1

Apis_mellifera_38.2d_(Not_maintained) (Honey bee) 3

Harpegnathos_saltator_v3.3 (Jerdon's jumping ant) 1

Linepithema_humile_v1.1 (Argentine ant) 2

Pogonomyrmex_barbatus_v1.2 (Red harvester ant) 1

Solenopsis_invicta_v.2.2.3 (Red fire ant) 1

Acromyrmex_echinatior_v3.8 (Panamanian leafcutter ant) 1

Atta_cephalotes_v1.1 0

Camponotus_floridanus_v3.3 (Florida carpenter ant) 1

Lucilia_cuprina (Australian sheep blowfly) 1

Drosophila_grimshawi_1.3 1

Drosophila_willistoni_1.3 2

Drosophila_pseudoobscura_2.13 1

Drosophila_persimilis_1.3 0

Drosophila_suzukii 1

Drosophila_yakuba_1.3 1

Drosophila_simulans_1.3 1

Drosophila_sechellia_1.3 1

Drosophila_melanogaster_76_5 (Fruit fly) 2

Drosophila_erecta_1.3 1

Drosophila_ananassae_1.3 1

Drosophila_virilis_1.2 1

Drosophila_mojavensis_1.3 1

Aedes_aegypti_55_(Not_maintained) (Yellow fever mosquito) 0

Culex_pipiens_quinquefasciatus_ (Southern house mosquito) 0

Anopheles_darlingi_22 (American malaria mosquito) 1

Anopheles_gambiae_49_3j (African malaria mosquito) 0

Tribolium_castaneum_3.0 (Red flour beetle) 1

Pediculus_humanus_corporis__(Early_assembly) (Human body louse) 1

Acyrthosiphon_pisum_ (Pea aphid) 5

Rhodnius_prolixus_22 2

Daphnia_pulex_ (Common water flea) 1

Strigamia_maritima_22 1

Sarcoptes_scabiei 0

Tetranychus_urticae_ (Two-spotted spider mite) 1

Ixodes_scapularis__(Preliminary) (Black-legged tick) 0

Pristionchus_pacificus_ 0

Meloidogyne_incognita_ (Southern root-knot nematode) 0

Meloidogyne_hapla_ 0

Onchocerca_volvulus_22 0

Brugia_malayi_WS250 (Agent of lymphatic filariasis) 0

Caenorhabditis_brenneri_ 1

Caenorhabditis_remanei_ 1

Caenorhabditis_elegans_76_235 (Roundworm) 12

Caenorhabditis_briggsae_2 2

Trichinella_spiralis_22 0

Hymenolepis_microstoma_ 0

Echinococcus_multilocularis_ 0

Echinococcus_granulosus_ 1

Taenia_solium_ (Pork tapeworm) 1

Schistosoma_mansoni_ 2

Mnemiopsis_leidyi (Sea walnut) 0

Thelohanellus_kitauei 1

Acropora_digitifera_v1.0 1

Nematostella_vectensis_1.0 (Starlet sea anemone) 1

Hydra_vulgaris 1

Amphimedon_queenslandica 1

Trichoplax_adhaerens_ 1

Proterospongia_sp._ATCC_50818_ 0

Monosiga_brevicollis_ 1

Sphaeroforma_arctica_JP610_ 0

Capsaspora_owczarzaki_ATCC_30864_ 1

Conidiobolus_coronatus_NRRL28638_v1.0 1

Mortierella_verticillata_NRRL_6337_ 1

Phycomyces_blakesleeanus_ 2

Rhizopus_oryzae_RA_99-880_ 3

Mucor_circinelloides_ 2

Rhizomucor_miehei_CAU432_ 0

Malassezia_globosa_CBS_7966_ 2

Sporisorium_reilianum_22 1

Mixia_osmundae_IAM_14324_v1.0 1

Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 0

Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1

Melampsora_laricis-populina_ 1

Rhodotorula_graminis_WP1_v1.0 1

Sporobolomyces_roseus_IAM_13481_ 1

Microbotryum_violaceum_22 1

Wallemia_sebi_v1.0 1

Sphaerobolus_stellatus_v1.0 1

Piloderma_croceum_F_1598_v1.0 1

Serpula_lacrymans_var._lacrymans_S7.9_ 1

Coniophora_puteana 1

Hydnomerulius_pinastri_v2.0 1

Paxillus_rubicundulus_Ve08.2h10_v1.0 1

Pisolithus_microcarpus_441_v1.0 1

Pisolithus_tinctorius_Marx_270_v1.0 1

Scleroderma_citrinum_Foug_A_v1.0 1

Coprinopsis_cinerea_okayama7_130_v3 1

Pleurotus_ostreatus_ (Oyster mushroom) 1

Amanita_thiersii_Skay4041_v1.0 1

Amanita_muscaria_Koide_v1.0 (Fly agaric) 1

Galerina_marginata_v1.0 1

Hebeloma_cylindrosporum_h7_v2.0 1

Laccaria_bicolor_S238N-H82_ 1

Agaricus_bisporus_var._bisporus_ 1

Schizophyllum_commune_ 1

Stereum_hirsutum_FP-91666_SS1__v1.0 1

Heterobasidion_annosum_ 1

Gloeophyllum_trabeumv1.0 1

Punctularia_strigosozonata_v1.0 1

Sebacina_vermifera_MAFF_305830_v1.0 1

Fomitiporia_mediterranea_v1.0 1

Tulasnella_calospora_AL13/4D_v1.0 1

Postia_placenta_ 1

Wolfiporia_cocos_MD-104_SS10__v1.0 1

Fomitopsis_pinicolav1.0 1

Fomitopsis_pinicola_FP-58527_SS1_v3.0 1

Phanerochaete_chrysosporium_RP-78_2.1 2

Dichomitus_squalens 1

Trametes_versicolor_v1.0 1

Tremella_mesenterica_ (Witches' butter) 1

Daldinia_eschscholzii_EC12_v1.0 1

Apiospora_montagnei_NRRL_25634_v1.0 1

Magnaporthe_poae_ATCC_64411_22 1

Magnaporthe_grisea_70-15_ 1

Podospora_anserina_ 1

Sporotrichum_thermophile_ATCC_42464_ 1

Thielavia_terrestris_NRRL_8126_ 1

Neurospora_tetrasperma_ 1

Neurospora_discreta_FGSC_8579_ 1

Neurospora_crassa_OR74A_ 1

Cryphonectria_parasitica_ (Chestnut blight fungus) 1

Verticillium_dahliae_VdLs.17_ 1

Acremonium_alcalophilumv_1.0 1

Glomerella_graminicola_22 1

Fusarium_graminearum_ 1

Nectria_haematococca_mpVI_ 1

Fusarium_oxysporum_f._sp._lycopersici_4286_ 1

Fusarium_verticillioides_7600_ 1

Trichoderma_asperellum_CBS_433.97_v1.0 1

Trichoderma_atroviride_ 1

Trichoderma_reesei_1.2 1

Trichoderma_virens_Gv29-8_ 1

Trichoderma_harzianum_CBS_226.95_v1.0 1

Amorphotheca_resinae_v1.0 (Creosote fungus) 1

Botrytis_cinerea_B05.10_ 1

Sclerotinia_sclerotiorum_ 1

Blumeria_graminis_22 1

Didymella_exigua_CBS_183.55_v1.0 1

Leptosphaeria_maculans_22 1

Setosphaeria_turcica_v1.0 1

Cochliobolus_miyabeanus_ATCC_44560_v1.0 1

Cochliobolus_victoriae_FI3_v1.0 1

Cochliobolus_carbonum_26-R-13_v1.0 1

Cochliobolus_heterostrophus_ (Southern corn leaf blight pathogen) 1

Alternaria_brassicicola_ 1

Cochliobolus_lunatus_m118_v2.0 1

Pyrenophora_teres_f._teres_22 1

Pyrenophora_tritici-repentis_ 1

Stagonospora_nodorum_ 1

Mycosphaerella_graminicola_IPO323_ 1

Zasmidium_cellare_ATCC_36951_v1.0 1

Dothistroma_septosporum 1

Septoria_musiva_v1.0 1

Mycosphaerella_fijiensis_CIRAD86_ 1

Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1

Paracoccidioides_brasiliensis_Pb18_ 1

Coccidioides_posadasii_RMSCC_3488_ 1

Coccidioides_immitis_RS_ 1

Ajellomyces_dermatitidis_SLH14081_ 1

Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1

Microsporum_canis_CBS_113480_ 1

Trichophyton_equinum_CBS_127.97_ 1

Trichophyton_verrucosum_HKI_0517_ 1

Arthroderma_benhamiae_CBS_112371_ 1

Trichophyton_tonsurans_CBS_112818_ 1

Trichophyton_rubrum_CBS_118892_ 1

Uncinocarpus_reesii_1704_ 1

Aspergillus_zonatus_v1.0 1

Penicillium_chrysogenum_Wisconsin_54-1255_ 1

Penicillium_chrysogenum_v1.0 1

Aspergillus_acidus_v1.0 1

Aspergillus_fumigatus_Af293 1

Aspergillus_brasiliensis_v1.0 1

Aspergillus_nidulans_FGSC_A4_ 1

Aspergillus_sydowii_v1.0 1

Aspergillus_versicolor_v1.0 1

Aspergillus_glaucus 1

Aspergillus_carbonarius_ITEM_5010_ 1

Neosartorya_fischeri_NRRL_181_ 1

Aspergillus_terreus_NIH2624_ 1

Aspergillus_tubingensis_v1.0 1

Aspergillus_wentii_v1.0 1

Aspergillus_oryzae_RIB40_ 1

Aspergillus_niger_22 1

Aspergillus_flavus_NRRL3357_ 1

Aspergillus_clavatus_NRRL_1_ 1

Penicillium_marneffei_ATCC_18224_ 1

Tuber_melanosporum_Mel28_22 1

Tuber_melanosporum_Vittad_ (Perigord truffle) 1

Hansenula_polymorpha_v2.0 1

Dekkera_bruxellensis_CBS_2499_v2.0 0

Pichia_membranifaciensv1.0 1

Candida_tanzawaensis_NRRL_Y-17324__v1.0 1

Candida_dubliniensis_CD36_ 1

Candida_tropicalis_MYA-3404_ 1

Candida_parapsilosis_ 1

Candida_albicans_SC5314 1

Lodderomyces_elongisporus_NRRL_YB-4239_ 1

Babjeviella_inositovora_NRRL_Y-12698_v1.0 1

Pichia_stipitis_CBS_6054_ 1

Candida_guilliermondii_ATCC_6260_ 1

Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1

Debaromyces_hansenii 1

Wickerhamomyces_anomalus 1

Pichia_pastoris_GS115_ 1

Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1

Yarrowia_lipolytica_CLIB122 1

Candida_lusitaniae_ATCC_42720_ 0

Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1

Vanderwaltozyma_polyspora_DSM_70294_ 1

Candida_glabrata_CBS138 1

Kluyveromyces_thermotolerans_CBS_6340 1

Lachancea_kluyveri_ 1

Kluyveromyces_waltii 1

Ashbya_gossypii_ATCC_10895_ 1

Zygosaccharomyces_rouxii_ 1

Saccharomyces_mikatae_MIT 2

Saccharomyces_paradoxus_MIT 2

Saccharomyces_cerevisiae_76 (Baker's yeast) 2

Saccharomyces_bayanus_MIT 1

Kluyveromyces_lactis 1

Schizosaccharomyces_cryophilus_OY26_22 1

Schizosaccharomyces_octosporus_yFS286_ 1

Schizosaccharomyces_japonicus_yFS275_ 1

Schizosaccharomyces_pombe (Fission yeast) 1

Catenaria_anguillulae_PL171_v1.0 0

Allomyces_macrogynus_ATCC_38327_ 0

Spizellomyces_punctatus_DAOM_BR117_ 1

Dictyostelium_discoideum 1

Dictyostelium_purpureum_ 1

Entamoeba_dispar_1.2 2

Entamoeba_invadens_1.2 0

Entamoeba_histolytica_1 3

Selaginella_moellendorffii_ 6

Pinus_taeda (Loblolly pine) 1

Picea_abies (Norway spruce) 2

Eucalyptus_grandis_v201 (Rose gum) 8

Theobroma_cacao_B97-61/B2_v1 (Cacao) 3

Gossypium_raimondii_v221 11

Citrus_clementina_v165 3

Citrus_sinensis_v154 (Sweet orange) 4

Thellungiella_halophila_v173 5

Brassica_rapa_Chiifu-401_1.2 (Field mustard) 5

Capsella_rubella_v183 5

Arabidopsis_lyrata_ (Lyrate rockcress) 4

Arabidopsis_thaliana_10 (Thale cress) 5

Carica_papaya_ (Papaya) 3

Medicago_truncatula_ (Barrel medic) 4

Phaseolus_vulgaris_v186 (French bean) 3

Glycine_max_v109 (Soybean) 7

Cucumis_sativus_v122 (Cucumber) 1

Fragaria_vesca_ (Wild strawberry) 2

Malus_domestica_v196 (Apple) 4

Prunus_persica_v139 (Peach) 3

Linum_usitatissimum_v200 (Flax) 6

Manihot_esculenta_v147 (Cassava) 7

Populus_trichocarpa_v156 (Black cottonwood) 6

Vitis_vinifera_ (Wine grape) 0

Mimulus_guttatus_v140 (Spotted monkey flower) 4

Solanum_lycopersicum_v.2.3 (Tomato) 4

Solanum_tuberosum_ (Potato) 5

Actinidia_chinensis_Hongyang_ 6

Aquilegia_coerulea_v195 5

Triticum_urartu_22 4

Triticum_aestivum_22 (Bread wheat) 9

Aegilops_tauschii_22 3

Brachypodium_distachyon_ (Stiff brome) 4

Oryza_barthii_22 (African wild rice) 3

Oryza_meridionalis_22 2

Oryza_glumaepatula_22 3

Oryza_glaberrima (African rice) 2

Oryza_punctata_22 4

Oryza_nivara_22 3

Oryza_brachyantha_22 (Malo sina) 5

Oryza_sativa_ssp._japonica_5.0 (Japanese rice) 5

Oryza_sativa_v193 (Rice) 5

Phyllostachys_heterocyclavar._pubescens (Kikko-chiku) 2

Panicum_virgatum_v202 (Switchgrass) 5

Setaria_italica_v164 (Foxtail millet) 4

Zea_mays_subsp._mays_ (Maize) 5

Zea_mays_v181 (Maize) 5

Sorghum_bicolor_ (Sorghum) 4

Musa_balbisiana (Balbis banana) 5

Musa_acuminata_22 (Wild Malaysian banana) 0

Amborella_trichopoda_22 2

Physcomitrella_patens 6

Coccomyxa_subellipsoidea_sp._C-169_v2 2

Asterochloris_sp._Cgr/DA1pho_v1.0 3

Chlorella_vulgaris_ 2

Volvox_carteri_f._nagariensis_ 1

Volvox_carteri_v199 1

Chlamydomonas_reinhardtii_4.0 1

Ostreococcus_sp._RCC809_ 3

Ostreococcus_lucimarinus_CCE9901_ 2

Ostreococcus_tauri_ 3

Bathycoccus_prasinos_ 1

Micromonas_sp._RCC299_ 1

Micromonas_pusilla_CCMP1545_v3.0 1

Cyanidioschyzon_merolae_strain_10D_22 1

Cyanidioschyzon_merolae 1

Porphyridium_purpureum_02_2012 1

Thecamonas_trahens_ATCC_50062_ 1

Bigelowiella_natans_CCMP2755_22 0

Giardia_lamblia_2.3 0

Cyanophora_paradoxa_ 1

Leishmania_mexicana_2.4 2

Leishmania_major_strain_Friedlin_ 17

Leishmania_infantum_JPCM5_2.4 3

Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1

Trypanosoma_vivax_ 0

Trypanosoma_cruzi_strain_CL_Brener 1

Trypanosoma_congolense_2.4 0

Trypanosoma_brucei_gambiense_v4.1 3

Trypanosoma_brucei_TREU927_v4.1 10

Ectocarpus_siliculosus 1

Aureococcus_anophagefferens_ 3

Albugo_laibachii_22 2

Pythium_iwayamai_DAOM_BR242034_22 1

Pythium_arrhenomanes_ATCC_12531_22 0

Pythium_ultimum_v1.7-2 1

Pythium_aphanidermatum_DAOM_BR444_22 1

Pythium_irregulare_DAOM_BR486_22 1

Pythium_vexans_DAOM_BR484_22 1

Phytophthora_ramorum_1.1 (Sudden oak death agent) 1

Phytophthora_sojae_1.1 1

Phytophthora_infestans_T30-4_ 1

Phytophthora_capsici_ 2

Hyaloperonospora_arabidopsidis_22 1

Phaeodactylum_tricornutumCCAP_1055/1 2

Fragilariopsis_cylindrus 2

Thalassiosira_pseudonana_CCMP1335 1

Perkinsus_marinus_ATCC_50983_ 3

Paramecium_tetraurelia_ 7

Tetrahymena_thermophila_SB210_1_ 1

Ichthyophthirius_multifiliis_strain_G5_ 2

Cryptosporidium_hominis 1

Cryptosporidium_muris 1

Cryptosporidium_parvum_Iowa_II 1

Neospora_caninum 1

Toxoplasma_gondii_VEG 1

Toxoplasma_gondii_ME49 1

Toxoplasma_gondii_GT1 1

Babesia_bovis_T2Bo_ 5

Theileria_parva__ 1

Theileria_annulata 1

Plasmodium_falciparum_3D7_ 1

Plasmodium_vivax_SaI-1_7.0 1

Plasmodium_knowlesi_strain_H_ 0

Plasmodium_yoelii_ssp._yoelii_1_ 0

Plasmodium_chabaudi_ 1

Plasmodium_berghei_ANKA_ 1

Symbiodinium_minutum_clade_B1_v1.2 1

Naegleria_gruberi_ 3

Trichomonas_vaginalis_ 0

Guillardia_theta_CCMP2712_v1.0_ 3

Emiliania_huxleyi_CCMP1516_ 4

Cryptobacterium_curtum_DSM_15641 1

Eggerthella_sp._YY7918 1

Eggerthella_lenta_DSM_2243 1

Slackia_heliotrinireducens_DSM_20476 1

Olsenella_uli_DSM_7084 1

Coriobacterium_glomerans_PW2 1

Nakamurella_multipartita_DSM_44233 1

Catenulispora_acidiphila_DSM_44928 1

Frankia_sp._EAN1pec 1

Frankia_alni_ACN14a 1

Kitasatospora_setae_KM-6054 1

Streptomyces_coelicolor_A3(2) 1

Streptomyces_sp._PAMC26508 1

Streptomyces_flavogriseus_ATCC_33331 1

Streptomyces_sp._SirexAA-E 1

Streptomyces_griseus_subsp._griseus_NBRC_13350 1

Streptomyces_bingchenggensis_BCW-1 1

Streptomyces_violaceusniger_Tu_4113 1

Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1

Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1

Actinosynnema_mirum_DSM_43827 1

Saccharomonospora_viridis_DSM_43017 1

Amycolatopsis_mediterranei_U32 1

Salinispora_arenicola_CNS-205 1

Salinispora_tropica_CNB-440 1

Verrucosispora_maris_AB-18-032 1

Micromonospora_sp._L5 1

Micromonospora_aurantiaca_ATCC_27029 1

Actinoplanes_sp._N902-109 1

Actinoplanes_sp._SE50/110 1

Actinoplanes_missouriensis_431 1

Tsukamurella_paurometabola_DSM_20162 1

Gordonia_sp._KTR9 1

Gordonia_polyisoprenivorans_VH2 0

Gordonia_bronchialis_DSM_43247 1

Rhodococcus_jostii_RHA1 1

Rhodococcus_equi_103S 1

Rhodococcus_opacus_B4 1

Rhodococcus_erythropolis_PR4 1

Nocardia_cyriacigeorgica_GUH-2 1

Nocardia_farcinica_IFM_10152 1

Amycolicicoccus_subflavus_DQS3-9A1 1

Mycobacterium_intracellulare_ATCC_13950 1

Mycobacterium_avium_104 1

Mycobacterium_vanbaalenii_PYR-1 1

Mycobacterium_canettii_CIPT_140010059 1

Mycobacterium_tuberculosis_KZN_1435 1

Mycobacterium_tuberculosis 1

Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1

Mycobacterium_rhodesiae_NBB3 1

Mycobacterium_ulcerans_Agy99 1

Mycobacterium_gilvum_PYR-GCK 1

Mycobacterium_chubuense_NBB4 1

Mycobacterium_marinum_M 1

Mycobacterium_leprae_Br4923 1

Chloroflexus_sp._MS-G 1

Chloroflexus_sp._Y-400-fl 1

Chloroflexus_aggregans_DSM_9485 1

Chloroflexus_aurantiacus_J-10-fl 1

Anaerococcus_prevotii_DSM_20548 1

Megasphaera_elsdenii_DSM_20460 1

Selenomonas_sputigena_ATCC_35185 1

Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1

Erysipelothrix_rhusiopathiae_str._Fujisawa 1

Natranaerobius_thermophilus_JW/NM-WN-LF 1

Clostridium_clariflavum_DSM_19732 1

Eubacterium_siraeum 1

Clostridium_cellulolyticum_H10 1

Clostridium_thermocellum_ATCC_27405 1

Faecalibacterium_prausnitzii 1

Ruminococcus_bromii 1

Ruminococcus_albus_7 1

Oscillibacter_valericigenes_Sjm18-20 1

butyrate-producing_bacterium_SS3/4 1

Dehalobacter_sp._DCA 1

Dehalobacter_sp._CF 1

Syntrophobotulus_glycolicus_DSM_8271 1

Acetobacterium_woodii_DSM_1030 1

Eubacterium_eligens_ATCC_27750 1

Eubacterium_limosum_KIST612 1

Clostridium_difficile_630 1

Clostridium_sticklandii_DSM_519 1

Filifactor_alocis_ATCC_35896 1

Clostridium_saccharolyticum_WM1 1

Clostridium_phytofermentans_ISDg 1

Clostridium_lentocellum_DSM_5427 1

[Ruminococcus]_obeum 1

[Ruminococcus]_torques 1

Eubacterium_rectale_M104/1 1

Eubacterium_rectale_ATCC_33656 1

Coprococcus_sp._ART55/1 1

Roseburia_hominis_A2-183 1

Roseburia_intestinalis 1

Butyrivibrio_proteoclasticus_B316 1

Heliobacterium_modesticaldum_Ice1 1

Alkaliphilus_oremlandii_OhILAs 1

Alkaliphilus_metalliredigens_QYMF 1

Clostridium_sp._BNL1100 1

Clostridium_ljungdahlii_DSM_13528 1

Clostridium_kluyveri_DSM_555 1

Clostridium_beijerinckii_NCIMB_8052 1

Clostridium_tetani_E88 1

Clostridium_perfringens_ATCC_13124 1

Clostridium_cellulovorans_743B 1

Clostridium_botulinum_A_str._ATCC_3502 1

Clostridium_acetobutylicum_ATCC_824 1

Acetohalobium_arabaticum_DSM_5501 1

Exiguobacterium_sp._MH3 1

Exiguobacterium_sp._AT1b 1

Exiguobacterium_sibiricum_255-15 1

Brevibacillus_brevis_NBRC_100599 1

Paenibacillus_sp._JDR-2 1

Paenibacillus_terrae_HPL-003 1

Paenibacillus_mucilaginosus_3016 1

Paenibacillus_polymyxa_M1 1

Bacillus_selenitireducens_MLS10 1

Oceanobacillus_iheyensis_HTE831 1

Bacillus_sp._JS 1

Bacillus_sp._1NLA3E 1

Bacillus_amyloliquefaciens_FZB42 1

Bacillus_atrophaeus_1942 1

Bacillus_subtilis_subsp._subtilis_str._168 1

Bacillus_licheniformis_DSM_13_=_ATCC_14580 1

Bacillus_halodurans_C-125 1

Bacillus_clausii_KSM-K16 1

Bacillus_cellulosilyticus_DSM_2522 1

Bacillus_megaterium_DSM_319 1

Bacillus_coagulans_2-6 1

Chlorobaculum_parvum_NCIB_8327 1

Chlorobium_tepidum_TLS 1

Haliscomenobacter_hydrossis_DSM_1100 1

Belliella_baltica_DSM_15883 1

Cyclobacterium_marinum_DSM_745 1

Marivirga_tractuosa_DSM_4126 1

Candidatus_Azobacteroides_pseudotrichonymphae_genomovar._CFP2 1

Pedobacter_saltans_DSM_12145 1

Solitalea_canadensis_DSM_3403 1

Sphingobacterium_sp._21 1

Fluviicola_taffensis_DSM_16823 1

Owenweeksia_hongkongensis_DSM_17368 1

Gramella_forsetii_KT0803 1

Maribacter_sp._HTCC2170 1

Robiginitalea_biformata_HTCC2501 1

Croceibacter_atlanticus_HTCC2559 1

Zobellia_galactanivorans 1

Muricauda_ruestringensis_DSM_13258 1

Fibrobacter_succinogenes_subsp._succinogenes_S85 1

Planctomyces_limnophilus_DSM_3776 1

Fretibacterium_fastidiosum 1

Turneriella_parva_DSM_21527 1

Brachyspira_murdochii_DSM_12563 1

Brachyspira_intermedia_PWS/A 1

Brachyspira_pilosicoli_95/1000 1

Brachyspira_hyodysenteriae_WA1 1

Borrelia_garinii_PBi 1

Borrelia_bissettii_DN127 1

Borrelia_afzelii_PKo 1

Borrelia_burgdorferi_B31 1

Borrelia_recurrentis_A1 1

Borrelia_duttonii_Ly 1

Borrelia_crocidurae_str._Achema 1

Borrelia_turicatae_91E135 1

Borrelia_hermsii_DAH 1

Spirochaeta_smaragdinae_DSM_11293 1

Sphaerochaeta_pleomorpha_str._Grapes 1

Sphaerochaeta_globus_str._Buddy 1

Sphaerochaeta_coccoides_DSM_17374 1

Spirochaeta_caldaria_DSM_7334 1

Treponema_azotonutricium_ZAS-9 1

Treponema_primitia_ZAS-2 1

Treponema_brennaborense_DSM_12168 1

Treponema_paraluiscuniculi_Cuniculi_A 1

Treponema_succinifaciens_DSM_2489 1

Treponema_pallidum_subsp._pallidum_SS14 2

Treponema_denticola_ATCC_35405 1

Spirochaeta_africana_DSM_8902 1

Spirochaeta_thermophila_DSM_6192 1

Desulfurispirillum_indicum_S5 1

Calditerrivibrio_nitroreducens_DSM_19672 1

Denitrovibrio_acetiphilus_DSM_12809 1

Flexistipes_sinusarabici_DSM_4947 1

Petrotoga_mobilis_SJ95 1

Granulicella_tundricola_MP5ACTX9 1

Granulicella_mallensis_MP5ACTX8 1

Terriglobus_saanensis_SP1PR4 1

Terriglobus_roseus_DSM_18391 1

Ilyobacter_polytropus_DSM_2926 1

Acidithiobacillus_ferrivorans_SS3 1

Acidithiobacillus_caldus_SM-1 1

Acidithiobacillus_ferrooxidans_ATCC_53993 1

Bacteriovorax_marinus_SJ 1

Bdellovibrio_bacteriovorus_HD100 1

Nitratifractor_salsuginis_DSM_16511 1

Sulfurospirillum_deleyianum_DSM_6946 1

Sulfurospirillum_barnesii_SES-3 1

Arcobacter_sp._L 1

Arcobacter_nitrofigilis_DSM_7299 1

Arcobacter_butzleri_RM4018 1

Campylobacter_hominis_ATCC_BAA-381 1

Campylobacter_lari_RM2100 1

Campylobacter_curvus_525.92 1

Campylobacter_concisus_13826 1

Campylobacter_jejuni_subsp._doylei_269.97 1

Campylobacter_sp._03-427 1

Campylobacter_fetus_subsp._fetus_82-40 1

Sulfuricurvum_kujiense_DSM_16994 1

Sulfurimonas_autotrophica_DSM_16294 1

Sulfurimonas_denitrificans_DSM_1251 1

Wolinella_succinogenes_DSM_1740 1

Helicobacter_cetorum_MIT_00-7128 1

Helicobacter_bizzozeronii_CIII-1 0

Helicobacter_hepaticus_ATCC_51449 1

Helicobacter_mustelae_12198 1

Helicobacter_felis_ATCC_49179 1

Helicobacter_cinaedi_PAGU611 1

Helicobacter_acinonychis_str._Sheeba 1

Helicobacter_pylori_B38 1

Sulfurovum_sp._NBC37-1 1

Desulfobacterium_autotrophicum_HRM2 1

Desulfococcus_oleovorans_Hxd3 1

Desulfovibrio_piezophilus 1

Desulfovibrio_aespoeensis_Aspo-2 1

Desulfovibrio_vulgaris_subsp._vulgaris_DP4 1

Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1

Geobacter_daltonii_FRC-32 1

Geobacter_sp._M21 1

Geobacter_uraniireducens_Rf4 1

Geobacter_lovleyi_SZ 1

Geobacter_bemidjiensis_Bem 1

Geobacter_sulfurreducens_KN400 1

Geobacter_metallireducens_GS-15 1

Pelobacter_propionicus_DSM_2379 1

Haliangium_ochraceum_DSM_14365 1

Sorangium_cellulosum_'So_ce_56' 0

Stigmatella_aurantiaca_DW4/3-1 1

Corallococcus_coralloides_DSM_2259 1

Myxococcus_xanthus_DK_1622 1

Myxococcus_fulvus_HW-1 1

Dechloromonas_aromatica_RCB 1

Thauera_sp._MZ1T 1

Azoarcus_sp._KH32C 1

Azoarcus_sp._BH72 1

Aromatoleum_aromaticum_EbN1 1

Dechlorosoma_suillum_PS 1

Pseudogulbenkiania_sp._NH8B 1

Laribacter_hongkongensis_HLHK9 1

Chromobacterium_violaceum_ATCC_12472 1

syncytium_symbiont_of_Diaphorina_citri 1

Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 1

beta_proteobacterium_CB 1

Methylibium_petroleiphilum_PM1 1

Thiomonas_arsenitoxydans 1

Thiomonas_intermedia_K12 1

Rubrivivax_gelatinosus_IL144 1

Leptothrix_cholodnii_SP-6 1

Burkholderia_rhizoxinica_HKI_454 1

Burkholderia_phytofirmans_PsJN 1

Burkholderia_phymatum_STM815 1

Burkholderia_xenovorans_LB400 1

Ralstonia_eutropha_JMP134 1

Cupriavidus_taiwanensis_LMG_19424 1

Cupriavidus_metallidurans_CH34 1

Cupriavidus_necator_N-1 1

Ralstonia_eutropha_H16 1

Ralstonia_pickettii_12D 1

Ralstonia_solanacearum_CFBP2957 1

Burkholderia_sp._RPE64 1

Burkholderia_sp._CCGE1002 1

Burkholderia_thailandensis_E264 1

Burkholderia_pseudomallei_1106a 1

Burkholderia_mallei_SAVP1 1

Burkholderia_ambifaria_AMMD 1

Burkholderia_cenocepacia_HI2424 1

Burkholderia_multivorans_ATCC_17616 1

Burkholderia_vietnamiensis_G4 1

Burkholderia_gladioli_BSR3 1

Burkholderia_glumae_BGR1 1

Verminephrobacter_eiseniae_EF01-2 1

Alicycliphilus_denitrificans_K601 1

Ramlibacter_tataouinensis_TTB310 1

Delftia_sp._Cs1-4 1

Delftia_acidovorans_SPH-1 1

Polaromonas_sp._JS666 1

Polaromonas_naphthalenivorans_CJ2 1

Variovorax_paradoxus_S110 1

Rhodoferax_ferrireducens_T118 1

Acidovorax_ebreus_TPSY 1

Acidovorax_sp._KKS102 1

Acidovorax_sp._JS42 1

Acidovorax_citrulli_AAC00-1 1

Acidovorax_avenae_subsp._avenae_ATCC_19860 1

Comamonas_testosteroni_CNB-2 1

Herminiimonas_arsenicoxydans 1

Collimonas_fungivorans_Ter331 1

Janthinobacterium_sp._Marseille 1

Herbaspirillum_seropedicae_SmR1 1

Pusillimonas_sp._T7-7 1

Bordetella_petrii_DSM_12804 1

Bordetella_avium_197N 1

Bordetella_pertussis_Tohama_I 1

Bordetella_parapertussis_12822 1

Bordetella_bronchiseptica_RB50 1

Achromobacter_xylosoxidans_A8 1

Achromobacter_xylosoxidans 0

Thiobacillus_denitrificans_ATCC_25259 1

Nitrosospira_multiformis_ATCC_25196 1

Nitrosomonas_sp._Is79A3 1

Nitrosomonas_eutropha_C91 1

Nitrosomonas_europaea_ATCC_19718 1

Sideroxydans_lithotrophicus_ES-1 1

Gallionella_capsiferriformans_ES-2 1

Methylotenera_versatilis_301 1

Methylotenera_mobilis_JLW8 1

Methylovorus_sp._MP688 1

Methylovorus_glucosetrophus_SIP3-4 1

Methylobacillus_flagellatus_KT 2

Magnetococcus_marinus_MC-1 1

Sphingobium_japonicum_UT26S 1

Sphingobium_chlorophenolicum_L-1 1

Sphingomonas_wittichii_RW1 1

Rhodospirillum_photometricum_DSM_122 1

Tistrella_mobilis_KA081020-065 1

Rhodospirillum_centenum_SW 1

Rhodospirillum_rubrum_F11 1

Azospirillum_lipoferum_4B 1

Azospirillum_sp._B510 1

Azospirillum_brasilense_Sp245 1

Granulibacter_bethesdensis_CGDNIH1 0

Gluconacetobacter_diazotrophicus_PAl_5 1

Gluconobacter_oxydans_621H 1

Micavibrio_aeruginosavorus_ARL-13 1

alpha_proteobacterium_HIMB59 1

Candidatus_Midichloria_mitochondrii_IricVA 1

Wolbachia_endosymbiont_of_Culex_quinquefasciatus_Pel 1

Wolbachia_sp._wRi 1

Ehrlichia_chaffeensis_str._Arkansas 1

Ehrlichia_canis_str._Jake 1

Ehrlichia_ruminantium_str._Gardel 1

Rickettsia_bellii_OSU_85-389 1

Rickettsia_canadensis_str._McKiel 1

Rickettsia_typhi_str._Wilmington 1

Rickettsia_prowazekii_str._BuV67-CWPP 1

Rickettsia_philipii_str._364D 1

Rickettsia_heilongjiangensis_054 1

Rickettsia_peacockii_str._Rustic 1

Rickettsia_felis_URRWXCal2 1

Rickettsia_slovaca_13-B 1

Rickettsia_parkeri_str._Portsmouth 1

Rickettsia_massiliae_MTU5 1

Rickettsia_japonica_YH 1

Rickettsia_africae_ESF-5 1

Rickettsia_rhipicephali_str._3-7-female6-CWPP 1

Rickettsia_montanensis_str._OSU_85-930 1

Candidatus_Rickettsia_amblyommii_str._GAT-30V 1

Rickettsia_australis_str._Cutlack 1

Rickettsia_akari_str._Hartford 1

Rickettsia_rickettsii_str._'Sheila_Smith' 1

Rickettsia_conorii_str._Malish_7 1

Azorhizobium_caulinodans_ORS_571 1

Methylobacterium_chloromethanicum_CM4 1

Methylobacterium_extorquens_AM1 1

Methylobacterium_populi_BJ001 1

Sinorhizobium_fredii_NGR234 1

Sinorhizobium_medicae_WSM419 1

Sinorhizobium_meliloti_AK83 1

Rhizobium_etli_CIAT_652 1

Agrobacterium_radiobacter_K84 1

Agrobacterium_sp._H13-3 1

Agrobacterium_vitis_S4 1

Mesorhizobium_opportunistum_WSM2075 1

Mesorhizobium_loti_MAFF303099 1

Methylocella_silvestris_BL2 1

Beijerinckia_indica_subsp._indica_ATCC_9039 1

Rhodopseudomonas_palustris_BisA53 1

Nitrobacter_winogradskyi_Nb-255 1

Nitrobacter_hamburgensis_X14 1

Bradyrhizobium_japonicum_USDA_110 1

Bradyrhizobium_sp._ORS_278 1

Saccharophagus_degradans_2-40 1

Teredinibacter_turnerae_T7901 1

Cellvibrio_japonicus_Ueda107 1

Aggregatibacter_aphrophilus_NJ8700 1

Aggregatibacter_actinomycetemcomitans_D7S-1 1

Haemophilus_somnus_129PT 1

Gallibacterium_anatis_UMN179 1

Pasteurella_multocida_subsp._multocida_str._3480 1

Haemophilus_parasuis_SH0165 1

Haemophilus_influenzae_PittEE 1

Actinobacillus_succinogenes_130Z 1

Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1

Oceanimonas_sp._GK1 1

Tolumonas_auensis_DSM_9187 1

Aeromonas_veronii_B565 1

Aeromonas_salmonicida_subsp._salmonicida_A449 1

Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1

Aliivibrio_salmonicida_LFI1238 1

Vibrio_fischeri_MJ11 1

Vibrio_sp._Ex25 1

Vibrio_harveyi_ATCC_BAA-1116 1

Vibrio_parahaemolyticus_RIMD_2210633 1

Vibrio_splendidus_LGP32 1

Vibrio_anguillarum_775 1

Vibrio_furnissii_NCTC_11218 1

Vibrio_vulnificus_MO6-24/O 1

Vibrio_cholerae_O395 1

Photobacterium_profundum_SS9 1

Psychromonas_ingrahamii_37 1

Psychromonas_sp._CNPT3 1

Idiomarina_loihiensis_L2TR 1

Ferrimonas_balearica_DSM_9799 1

Shewanella_piezotolerans_WP3 1

Shewanella_loihica_PV-4 1

Shewanella_halifaxensis_HAW-EB4 1

Shewanella_sediminis_HAW-EB3 1

Shewanella_denitrificans_OS217 1

Shewanella_pealeana_ATCC_700345 1

Shewanella_oneidensis_MR-1 1

Shewanella_baltica_OS185 1

Shewanella_woodyi_ATCC_51908 1

Shewanella_sp._MR-4 1

Shewanella_amazonensis_SB2B 1

Shewanella_violacea_DSS12 1

Shewanella_frigidimarina_NCIMB_400 1

Shewanella_putrefaciens_CN-32 1

Colwellia_psychrerythraea_34H 1

Pseudoalteromonas_sp._SM9913 1

Pseudoalteromonas_atlantica_T6c 1

Pseudoalteromonas_haloplanktis_TAC125 1

Glaciecola_sp._4H-3-7+YE-5 1

Glaciecola_nitratireducens_FR1064 1

Marinobacter_adhaerens_HP15 1

Marinobacter_sp._BSs20148 1

Marinobacter_hydrocarbonoclasticus_ATCC_49840 1

Marinobacter_aquaeolei_VT8 1

Alteromonas_sp._SN2 1

Alteromonas_macleodii_str._'Deep_ecotype' 1

Kangiella_koreensis_DSM_16069 1

Hahella_chejuensis_KCTC_2396 1

Alcanivorax_borkumensis_SK2 1

Marinomonas_posidonica_IVIA-Po-181 1

Marinomonas_sp._MWYL1 1

Marinomonas_mediterranea_MMB-1 1

Chromohalobacter_salexigens_DSM_3043 1

Halomonas_elongata_DSM_2581 1

Methylomicrobium_alcaliphilum 1

Methylomonas_methanica_MC09 1

Methylococcus_capsulatus_str._Bath 1

Rhodanobacter_denitrificans 1

Frateuria_aurantia_DSM_6220 1

Pseudoxanthomonas_spadix_BD-a59 1

Pseudoxanthomonas_suwonensis_11-1 1

Stenotrophomonas_maltophilia_K279a 1

Xylella_fastidiosa_M23 1

Xanthomonas_axonopodis_pv._citri_str._306 1

Xanthomonas_albilineans_GPE_PC73 1

Xanthomonas_oryzae_pv._oryzae_PXO99A 1

Xanthomonas_campestris_pv._campestris_str._B100 1

Halothiobacillus_neapolitanus_c2 1

Spiribacter_sp._UAH-SP71 1

Alkalilimnicola_ehrlichii_MLHE-1 1

Thioalkalivibrio_sulfidophilus_HL-EbGr7 1

Thioalkalivibrio_sp._K90mix 1

Halorhodospira_halophila_SL1 1

Allochromatium_vinosum_DSM_180 1

Thiocystis_violascens_DSM_198 1

Nitrosococcus_halophilus_Nc4 1

Nitrosococcus_oceani_ATCC_19707 1

Coxiella_burnetii_Dugway_5J108-111 1

Legionella_longbeachae_NSW150 1

Legionella_pneumophila_str._Corby 1

Baumannia_cicadellinicola_str._Hc_(Homalodisca_coagulata) 1

gamma_proteobacterium_HdN1 1

Candidatus_Ruthia_magnifica_str._Cm_(Calyptogena_magnifica) 1

Candidatus_Vesicomyosocius_okutanii_HA 1

Photorhabdus_asymbiotica 1

Photorhabdus_luminescens_subsp._laumondii_TTO1 1

Xenorhabdus_bovienii_SS-2004 1

Xenorhabdus_nematophila_ATCC_19061 1

Providencia_stuartii_MRSN_2154 1

Proteus_mirabilis_HI4320 1

Edwardsiella_ictaluri_93-146 1

Edwardsiella_tarda_EIB202 1

Rahnella_sp._Y9602 1

Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1

Yersinia_pseudotuberculosis_IP_31758 1

Yersinia_pestis_Pestoides_F 1

Yersinia_enterocolitica_subsp._enterocolitica_8081 1

Serratia_sp._AS12 1

Serratia_symbiotica_str._'Cinara_cedri' 1

Serratia_sp._ATCC_39006 1

Serratia_plymuthica_AS9 1

Serratia_proteamaculans_568 1

Dickeya_dadantii_Ech703 1

Dickeya_zeae_Ech1591 1

Pectobacterium_wasabiae_WPP163 1

Pectobacterium_sp._SCC3193 1

Pectobacterium_atrosepticum_SCRI1043 1

Pectobacterium_carotovorum_subsp._carotovorum_PC1 1

Sodalis_glossinidius_str._'morsitans' 1

Halyomorpha_halys_symbiont 1

Pantoea_sp._At-9b 1

Pantoea_vagans_C9-1 1

Pantoea_ananatis_LMG_20103 1

Wigglesworthia_glossinidia_endosymbiont_of_Glossina_brevipalpis 1

Buchnera_aphidicola_BCc 1

Erwinia_tasmaniensis_Et1/99 1

Erwinia_sp._Ejp617 1

Erwinia_billingiae_Eb661 1

Erwinia_pyrifoliae_Ep1/96 1

Erwinia_amylovora_ATCC_49946 1

Escherichia_blattae_DSM_4481 1

Cronobacter_turicensis_z3032 1

Cronobacter_sakazakii_ES15 1

Candidatus_Riesia_pediculicola_USDA 1

secondary_endosymbiont_of_Ctenarytaina_eucalypti 1

Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 1

Enterobacteriaceae_bacterium_strain_FGI_57 1

Shigella_sonnei_Ss046 1

Shigella_dysenteriae_Sd197 1

Shigella_boydii_CDC_3083-94 1

Salmonella_bongori_NCTC_12419 1

Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 1

Klebsiella_oxytoca_E718 1

Klebsiella_variicola_At-22 1

Klebsiella_pneumoniae_NTUH-K2044 1

Enterobacter_aerogenes_KCTC_2190 1

Escherichia_fergusonii_ATCC_35469 1

Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1

Enterobacter_sp._R4-368 1

Enterobacter_sp._638 1

Enterobacter_asburiae_LF7a 1

Enterobacter_cloacae_subsp._dissolvens_SDM 1

Citrobacter_rodentium_ICC168 1

Citrobacter_koseri_ATCC_BAA-895 1

Azotobacter_vinelandii_DJ 1

Pseudomonas_sp._TKP 1

Pseudomonas_sp._UW4 1

Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1

Pseudomonas_entomophila_L48 1

Pseudomonas_syringae_pv._tomato_str._DC3000 1

Pseudomonas_stutzeri_A1501 1

Pseudomonas_fulva_12-X 1

Pseudomonas_putida_F1 1

Pseudomonas_protegens_Pf-5 1

Pseudomonas_fluorescens_SBW25 1

Pseudomonas_mendocina_ymp 1

Pseudomonas_aeruginosa_UCBPP-PA14 1

Pseudomonas_sp._VLB120 1

Psychrobacter_sp._G 1

Psychrobacter_sp._PRwf-1 1

Psychrobacter_arcticus_273-4 1

Psychrobacter_cryohalolentis_K5 1

Moraxella_catarrhalis_RH4 1

Acinetobacter_oleivorans_DR1 1

Acinetobacter_calcoaceticus_PHEA-2 1

Acinetobacter_sp._ADP1 1

Methylophaga_sp._JAM1 1

Cycloclasticus_sp._P1 1

Thiomicrospira_crunogena_XCL-2 1

Thioalkalimicrobium_cyclicum_ALM1 1

Francisella_noatunensis_subsp._orientalis_str._Toba_04 1

Francisella_sp._TX077308 1

Francisella_philomiragia_subsp._philomiragia_ATCC_25017 1

Francisella_tularensis_subsp._tularensis_WY96-3418 1

Francisella_cf._novicida_3523 1

Francisella_novicida_U112 1

Thermoplasmatales_archaeon_BRNA1 1

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Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 1

Pan_troglodytes_69_2.1.4 (Chimpanzee) 2

Gorilla_gorilla_69_3.1 (Western gorilla) 2

Pongo_abelii_69_2 (Sumatran orangutan) 2

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 0

Macaca_mulatta_69_1 (Rhesus monkey) 1

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 1

Otolemur_garnettii_69_3 (Small-eared galago) 2

Microcebus_murinus_69_1 (Gray mouse lemur) 0

Rattus_norvegicus_69_3.4 (Norway rat) 5

Mus_musculus_69_38 (House mouse) 2

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 1

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 4

Cavia_porcellus_69_3 (Domestic guinea pig) 2

Oryctolagus_cuniculus_69_2 (Rabbit) 2

Ochotona_princeps_69 (American pika) 0

Tupaia_belangeri_69 (Northern tree shrew) 0

Sus_scrofa_69_10.2 (Pig) 1

Bos_taurus_69_3.1 (Cattle) 3

Vicugna_pacos_69_1 (Alpaca) 0

Tursiops_truncatus_69_1 (Bottlenose dolphin) 1

Mustela_putorius_furo_69_1.0 (Domestic ferret) 2

Ailuropoda_melanoleuca_69_1 (Giant panda) 1

Canis_familiaris_69_3.1 (Dog) 2

Felis_catus_69 (Domestic cat) 2

Equus_caballus_69_2 (Horse) 2

Myotis_lucifugus_69_2.0 (Little brown bat) 2

Pteropus_vampyrus_69_1 (Large flying fox) 1

Sorex_araneus_69_1 (European shrew) 1

Erinaceus_europaeus_69 (Western European hedgehog) 0

Procavia_capensis_69_1 (Cape rock hyrax) 0

Loxodonta_africana_69_3 (African savanna elephant) 2

Echinops_telfairi_69 (Small Madagascar hedgehog) 0

Dasypus_novemcinctus_69_2 (Nine-banded armadillo) 0

Choloepus_hoffmanni_69_1 (Hoffmann's two-fingered sloth) 0

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 2

Monodelphis_domestica_69_5 (Gray short-tailed opossum) 0

Ornithorhynchus_anatinus_69_5 (Platypus) 1

Petromyzon_marinus_69_7.0 (Sea lamprey) 1

Meleagris_gallopavo_69_2 (Turkey) 2

Gallus_gallus_69_2 (Chicken) 1

Taeniopygia_guttata_69_3.2.4 (Zebra finch) 1

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 2

Anolis_carolinensis_69_2.0 (Green anole) 1

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 2

Latimeria_chalumnae_69_1 (Coelacanth) 3

Gadus_morhua_69_1 (Atlantic cod) 3

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 1

Takifugu_rubripes_69_4 (Torafugu) 2

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 2

Oryzias_latipes_69_1 (Japanese medaka) 2

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 3

Oreochromis_niloticus_69_1.0 (Nile tilapia) 2

Danio_rerio_69_9 (Zebrafish) 2

Ciona_savignyi_69_2.0 (Pacific transparent sea squirt) 1

Ciona_intestinalis_69 (Vase tunicate) 0

Drosophila_melanogaster_69_5 (Fruit fly) 1

Caenorhabditis_elegans_69_215 (Roundworm) 2

Saccharomyces_cerevisiae_69_4 (Baker's yeast) 2

Arabidopsis_thaliana_10 (Thale cress) 4

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Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 4

Homo_sapiens__(NCBI_version) (Human) 2

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 2

Heliconius_numata__(Incomplete) 1

Loa_loa_v3.3_(Request) (Eye worm) 0

Wuchereria_bancrofti_v1.0_(Request) (Agent of lymphatic filariasis) 0

Brugia_malayi_v1.0_(Duplicate) (Agent of lymphatic filariasis) 0

Encephalitozoon_intestinalis__(endoparasite) 1

Encephalitozoon_cuniculi_(endoparasite) 1

Lotus_japonicus__(Early_assembly) 2

Malus_x_domestica_(Duplicate) (Apple) 4

Ricinus_communis__(Early_assembly) (Castor bean) 3

Nicotiana_benthamiana_0.4.4_(Early_draft) 1

Solanum_pimpinellifolium_A-1.0_(Early_draft) (Currant tomato) 4

Solanum_lycopersicum_v2.3_(Early_assembly) (Tomato) 4

Guillardia_theta_(nucleomorph) 1

Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1

Wolbachia_endosymbiont_of_Brugia_malayi_v1.0_(Broad_Institute) 1

Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1

NCBI_plasmid_sequences_(Plasmids) 18

Protozoadb_2010_08_(Protozoadb) 67

Core_Eukaryotic_Genes_458_(CEGMA) 6

STRING_v9.0.5_(STRING) 658

Uniprot_2018_03_genome 179452

NCBI_2017_08_genome 54486

TargetDB__(Targets) 47

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Domain combinations for 55874,_gap_,54211,_gap_,110942 superfamilies in groups of genomes