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Domain combinations for 55909,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55909 - Pentein

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Canis_familiaris_76_3.1   (Dog)   0
Crassostrea_gigas_22   (Pacific oyster)   2
Bombyx_mori_   (Domestic silkworm)   1
Pristionchus_pacificus_ 2
Chaetomium_globosum_CBS_148.51_ 0
Verticillium_dahliae_VdLs.17_ 0
Fusarium_graminearum_ 0
Nectria_haematococca_mpVI_ 0
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1
Trichoderma_virens_Gv29-8_ 0
Trichoderma_harzianum_CBS_226.95_v1.0 0
Cochliobolus_victoriae_FI3_v1.0 0
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   1
Aegilops_tauschii_22 1
Physcomitrella_patens 1
Coccomyxa_subellipsoidea_sp._C-169_v2 1
Chlorella_vulgaris_ 1
Porphyridium_purpureum_02_2012 1
Giardia_lamblia_2.3 1
Leishmania_mexicana_2.4 1
Leishmania_major_strain_Friedlin_ 1
Leishmania_infantum_JPCM5_2.4 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1
Trypanosoma_vivax_ 1
Trypanosoma_cruzi_strain_CL_Brener 1
Trypanosoma_brucei_gambiense_v4.1 0
Trypanosoma_brucei_TREU927_v4.1 1
Naegleria_gruberi_ 1
Leptolyngbya_sp._PCC_7376 1
Pseudanabaena_sp._PCC_7367 1
Synechocystis_sp._PCC_6803 0
Thermosynechococcus_sp._NK55 1
Thermosynechococcus_elongatus_BP-1 1
Synechococcus_sp._PCC_7502 1
Synechococcus_sp._PCC_6312 0
Synechococcus_elongatus_PCC_7942 1
Microcoleus_sp._PCC_7113 1
Trichodesmium_erythraeum_IMS101 1
Geitlerinema_sp._PCC_7407 0
Cyanothece_sp._PCC_8802 1
Gloeocapsa_sp._PCC_7428 0
Microcystis_aeruginosa_NIES-843 0
Gloeobacter_violaceus_PCC_7421 1
Rivularia_sp._PCC_7116 0
Calothrix_sp._PCC_7507 1
Anabaena_variabilis_ATCC_29413 1
'Nostoc_azollae'_0708 1
Nostoc_sp._PCC_7107 1
Nostoc_punctiforme_PCC_73102 1
Nostoc_sp._PCC_7120 1
Nostoc_sp._PCC_7524 1
Anabaena_sp._90 0
Eggerthella_lenta_DSM_2243 1
Streptomyces_scabiei_87.22 0
Kocuria_rhizophila_DC2201 1
Clostridium_difficile_630 1
Clostridium_botulinum_A_str._ATCC_3502 1
Candidatus_Cloacamonas_acidaminovorans 1
Haliscomenobacter_hydrossis_DSM_1100 2
Niastella_koreensis_GR20-10 1
Fibrella_aestuarina 1
Leadbetterella_byssophila_DSM_17132 1
Dyadobacter_fermentans_DSM_18053 1
Spirosoma_linguale_DSM_74 0
Runella_slithyformis_DSM_19594 1
Porphyromonas_gingivalis_ATCC_33277 1
Solitalea_canadensis_DSM_3403 0
Sphingobacterium_sp._21 0
Maribacter_sp._HTCC2170 0
Aequorivita_sublithincola_DSM_14238 1
Bdellovibrio_bacteriovorus_HD100 0
Corallococcus_coralloides_DSM_2259 1
Halobacterium_salinarum_R1 1
Halobacterium_sp._NRC-1 1

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Strains
Genome     Number
Trypanosoma_brucei_Lister_427_v4.1 1
Chroococcidiopsis_thermalis_PCC_7203 1
Chamaesiphon_minutus_PCC_6605 1
Synechocystis_sp._PCC_6803_substr._PCC-P 0
Synechocystis_sp._PCC_6803_substr._PCC-N 0
Synechocystis_sp._PCC_6803_substr._GT-I 0
Synechocystis_sp._PCC_6803 0
Synechococcus_sp._JA-2-3B'a(2-13) 1
Synechococcus_sp._PCC_7002 1
Synechococcus_elongatus_PCC_6301 1
Crinalium_epipsammum_PCC_9333 1
Oscillatoria_nigro-viridis_PCC_7112 1
Oscillatoria_acuminata_PCC_6304 1
Arthrospira_platensis_NIES-39 0
Cyanothece_sp._PCC_7822 1
Cyanothece_sp._PCC_7425 0
Cyanothece_sp._PCC_7424 1
Cyanothece_sp._ATCC_51142 1
Cyanothece_sp._PCC_8801 1
Cyanobacterium_aponinum_PCC_10605 0
Cyanobacterium_stanieri_PCC_7202 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 1
Stanieria_cyanosphaera_PCC_7437 1
Calothrix_parietina_Calothrix_sp._PCC_6303 1
Cylindrospermum_stagnale_PCC_7417 1
Anabaena_cylindrica_PCC_7122 0
Clostridium_botulinum_H04402_065 1
Clostridium_botulinum_F_str._230613 1
Clostridium_botulinum_F_str._Langeland 1
Clostridium_botulinum_B1_str._Okra 1
Clostridium_botulinum_Ba4_str._657 1
Clostridium_botulinum_A2_str._Kyoto 1
Clostridium_botulinum_A3_str._Loch_Maree 1
Clostridium_botulinum_A_str._Hall 1
Clostridium_botulinum_A_str._ATCC_19397 1
Emticicia_oligotrophica_DSM_17448 1
Porphyromonas_gingivalis_TDC60 1
Porphyromonas_gingivalis_W83 1
Bdellovibrio_bacteriovorus_str._Tiberius 0
Natronobacterium_gregoryi_SP2 1

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Longest transcript per gene
Genome     Number
Canis_familiaris_69_3.1   (Dog)   0

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   1
NCBI_plasmid_sequences_(Plasmids) 2
TargetDB__(Targets) 3
Protein_Data_Bank_(all_PDB_sequenc) 5
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 5
Protozoadb_2010_08_(Protozoadb) 9
STRING_v9.0.5_(STRING) 33
Uniprot_2018_03_genome 1878
NCBI_2017_08_genome 795

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