SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 56112,48452,48452 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56112 - Protein kinase-like (PK-like)
48452 - TPR-like
48452 - TPR-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Capsaspora_owczarzaki_ATCC_30864_ 0
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Punctularia_strigosozonata_v1.0 1
Sebacina_vermifera_MAFF_305830_v1.0 1
Tulasnella_calospora_AL13/4D_v1.0 76
Stagonospora_nodorum_ 0
Aspergillus_sydowii_v1.0 0
Aspergillus_versicolor_v1.0 0
Neosartorya_fischeri_NRRL_181_ 1
Dictyostelium_purpureum_ 1
Ectocarpus_siliculosus 0
Paramecium_tetraurelia_ 0
Tetrahymena_thermophila_SB210_1_ 6
Ichthyophthirius_multifiliis_strain_G5_ 0
Naegleria_gruberi_ 2
Leptolyngbya_sp._PCC_7376 1
Acaryochloris_marina_MBIC11017 1
Microcoleus_sp._PCC_7113 2
Trichodesmium_erythraeum_IMS101 2
Calothrix_sp._PCC_7507 0
Anabaena_variabilis_ATCC_29413 1
Nostoc_punctiforme_PCC_73102 1
Nostoc_sp._PCC_7120 1
Anabaena_sp._90 2
Streptomyces_coelicolor_A3(2) 1
Streptomyces_sp._PAMC26508 0
Streptomyces_flavogriseus_ATCC_33331 0
Streptomyces_sp._SirexAA-E 0
Streptomyces_griseus_subsp._griseus_NBRC_13350 0
Streptomyces_violaceusniger_Tu_4113 0
Streptomyces_avermitilis_MA-4680 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Roseiflexus_sp._RS-1 1
Roseiflexus_castenholzii_DSM_13941 1
Chloroflexus_sp._MS-G 1
Chloroflexus_sp._Y-400-fl 1
Chloroflexus_aggregans_DSM_9485 1
Chloroflexus_aurantiacus_J-10-fl 1
Bacillus_cellulosilyticus_DSM_2522 1
Gemmatimonas_aurantiaca_T-27 0
Flexibacter_litoralis_DSM_6794 0
Marivirga_tractuosa_DSM_4126 0
Isosphaera_pallida_ATCC_43644 0
Rhodopirellula_baltica_SH_1 0
Opitutus_terrae_PB90-1 0
Candidatus_Solibacter_usitatus_Ellin6076 2
Granulicella_tundricola_MP5ACTX9 0
Candidatus_Koribacter_versatilis_Ellin345 3
Acidobacterium_capsulatum_ATCC_51196 0
Desulfococcus_oleovorans_Hxd3 1
Haliangium_ochraceum_DSM_14365 0
Anaeromyxobacter_sp._Fw109-5 0
Stigmatella_aurantiaca_DW4/3-1 0
Corallococcus_coralloides_DSM_2259 0
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 0
Hyphomonas_neptunium_ATCC_15444 0
Pseudoalteromonas_atlantica_T6c 0
Rhodanobacter_denitrificans 0
Frateuria_aurantia_DSM_6220 0
Pseudoxanthomonas_spadix_BD-a59 0
Pseudoxanthomonas_suwonensis_11-1 0
Xanthomonas_axonopodis_pv._citri_str._306 1
Thiocystis_violascens_DSM_198 0
Methanocella_conradii_HZ254 0
Methanocella_paludicola_SANAE 0
Methanobrevibacter_ruminantium_M1 1

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Strains
Genome     Number
Dactylococcopsis_salina_PCC_8305 0
Synechococcus_sp._JA-2-3B'a(2-13) 0
Synechococcus_sp._JA-3-3Ab 0
Synechococcus_sp._PCC_7002 1
Oscillatoria_nigro-viridis_PCC_7112 1
Oscillatoria_acuminata_PCC_6304 1
Arthrospira_platensis_NIES-39 3
Cyanothece_sp._PCC_7822 0
Cyanothece_sp._PCC_7424 0
Cyanobacterium_stanieri_PCC_7202 0
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 0
Streptomyces_davawensis_JCM_4913 0
Streptomyces_fulvissimus_DSM_40593 0
Streptomyces_venezuelae_ATCC_10712 0
Streptomyces_collinus_Tu_365 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Faecalibacterium_prausnitzii_L2-6 1
Singulisphaera_acidiphila_DSM_18658 0
Myxococcus_stipitatus_DSM_14675 0
Glaciecola_psychrophila_170 0
Alteromonas_macleodii_str._'English_Channel_673' 0
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 0
Alteromonas_macleodii_str._'Black_Sea_11' 0
Xanthomonas_citri_subsp._citri_Aw12879 0
Xanthomonas_campestris_pv._vesicatoria_str._85-10 0
Xanthomonas_axonopodis_pv._citrumelo_F1 0
Xanthomonas_axonopodis_Xac29-1 0

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Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 0
NCBI_2017_08_genome 428
Uniprot_2018_03_genome 2770
TargetDB__(Targets) 5
STRING_v9.0.5_(STRING) 29

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