SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 56112,49899 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56112 - Protein kinase-like (PK-like)
49899 - Concanavalin A-like lectins/glucanases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Camponotus_floridanus_v3.3   (Florida carpenter ant)   0
Selaginella_moellendorffii_ 0
Pinus_taeda   (Loblolly pine)   0
Arabidopsis_lyrata_   (Lyrate rockcress)   0
Cucumis_sativus_v122   (Cucumber)   0
Malus_domestica_v196   (Apple)   0
Vitis_vinifera_   (Wine grape)   0
Actinidia_chinensis_Hongyang_ 0
Triticum_urartu_22 0
Triticum_aestivum_22   (Bread wheat)   0
Aegilops_tauschii_22 0
Oryza_barthii_22   (African wild rice)   0
Oryza_meridionalis_22 0
Oryza_glumaepatula_22 0
Oryza_glaberrima   (African rice)   0
Oryza_punctata_22 0
Oryza_nivara_22 0
Oryza_brachyantha_22   (Malo sina)   0
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   0
Oryza_sativa_v193   (Rice)   0
Setaria_italica_v164   (Foxtail millet)   0
Sorghum_bicolor_   (Sorghum)   0
Musa_balbisiana   (Balbis banana)   0
Musa_acuminata_22   (Wild Malaysian banana)   1
Naegleria_gruberi_ 0
Microcoleus_sp._PCC_7113 1
Streptomyces_coelicolor_A3(2) 1
Planctomyces_brasiliensis_DSM_5305 0
Rhodopirellula_baltica_SH_1 1

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   0
STRING_v9.0.5_(STRING) 3
NCBI_2017_08_genome 55
Uniprot_2018_03_genome 99
TargetDB__(Targets) 1

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