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Home > SCOP hierarchy > Domain combination - 56112,54236,_gap_

Domain combinations for 56112,54236,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56112 - Protein kinase-like (PK-like)
54236 - Ubiquitin-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 5

Pan_troglodytes_76_2.1.4 (Chimpanzee) 1

Gorilla_gorilla_76_3.1 (Western gorilla) 1

Pongo_abelii_76_2 (Sumatran orangutan) 1

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 1

Papio_anubis_76 (Olive baboon) 1

Macaca_mulatta_76_1 (Rhesus monkey) 2

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 4

Otolemur_garnettii_76_3 (Small-eared galago) 1

Microcebus_murinus_76_1 (Gray mouse lemur) 1

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 1

Cavia_porcellus_76_3 (Domestic guinea pig) 1

Ochotona_princeps_76 (American pika) 1

Bos_taurus_76_3.1 (Cattle) 1

Ovis_aries_76_3.1 (Sheep) 1

Canis_familiaris_76_3.1 (Dog) 1

Felis_catus_76_6.2 (Domestic cat) 1

Equus_caballus_76_2 (Horse) 1

Myotis_lucifugus_76_2.0 (Little brown bat) 1

Pteropus_vampyrus_76_1 (Large flying fox) 1

Sorex_araneus_76_1 (European shrew) 0

Erinaceus_europaeus_76 (Western European hedgehog) 1

Procavia_capensis_76_1 (Cape rock hyrax) 1

Loxodonta_africana_76_3 (African savanna elephant) 2

Echinops_telfairi_76 (Small Madagascar hedgehog) 1

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 3

Choloepus_hoffmanni_76_1 (Hoffmann's two-fingered sloth) 1

Petromyzon_marinus_76_7.0 (Sea lamprey) 1

Meleagris_gallopavo_76_2 (Turkey) 1

Anas_platyrhynchos_76_1.0 (Mallard) 1

Ficedula_albicollis_76_1.0 (Collared flycatcher) 1

Xenopus_laevis_ (African clawed frog) 2

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 2

Gadus_morhua_76_1 (Atlantic cod) 1

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 1

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 1

Poecilia_formosa_76 (Amazon molly) 1

Oreochromis_niloticus_76_1.0 (Nile tilapia) 1

Astyanax_mexicanus_76 (Mexican tetra) 1

Danio_rerio_76_9 (Zebrafish) 2

Octopus_bimaculoides_280 4

Lottia_gigantea_ (Owl limpet) 1

Danaus_plexippus_OGS1.0 (Monarch butterfly) 1

Heliconius_melpomene_ (Postman butterfly) 1

Camponotus_floridanus_v3.3 (Florida carpenter ant) 1

Drosophila_willistoni_1.3 1

Drosophila_pseudoobscura_2.13 1

Drosophila_persimilis_1.3 1

Drosophila_suzukii 1

Drosophila_yakuba_1.3 1

Drosophila_simulans_1.3 1

Drosophila_sechellia_1.3 1

Drosophila_melanogaster_76_5 (Fruit fly) 2

Drosophila_erecta_1.3 1

Drosophila_ananassae_1.3 1

Drosophila_virilis_1.2 1

Drosophila_mojavensis_1.3 1

Hydra_vulgaris 0

Amphimedon_queenslandica 0

Proterospongia_sp._ATCC_50818_ 1

Musa_balbisiana (Balbis banana) 0

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Strains
Genome Number

Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2) (Tropical clawed frog) 4

Drosophila_melanogaster_FlyBase_5.12_(FlyBase) (Fruit fly) 2

Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 1

Pan_troglodytes_69_2.1.4 (Chimpanzee) 1

Gorilla_gorilla_69_3.1 (Western gorilla) 1

Pongo_abelii_69_2 (Sumatran orangutan) 1

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 1

Macaca_mulatta_69_1 (Rhesus monkey) 1

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 1

Otolemur_garnettii_69_3 (Small-eared galago) 1

Microcebus_murinus_69_1 (Gray mouse lemur) 1

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 1

Cavia_porcellus_69_3 (Domestic guinea pig) 1

Ochotona_princeps_69 (American pika) 1

Bos_taurus_69_3.1 (Cattle) 1

Canis_familiaris_69_3.1 (Dog) 1

Felis_catus_69 (Domestic cat) 1

Equus_caballus_69_2 (Horse) 1

Myotis_lucifugus_69_2.0 (Little brown bat) 1

Pteropus_vampyrus_69_1 (Large flying fox) 1

Sorex_araneus_69_1 (European shrew) 0

Erinaceus_europaeus_69 (Western European hedgehog) 1

Procavia_capensis_69_1 (Cape rock hyrax) 1

Loxodonta_africana_69_3 (African savanna elephant) 1

Echinops_telfairi_69 (Small Madagascar hedgehog) 1

Choloepus_hoffmanni_69_1 (Hoffmann's two-fingered sloth) 1

Petromyzon_marinus_69_7.0 (Sea lamprey) 1

Meleagris_gallopavo_69_2 (Turkey) 1

Gallus_gallus_69_2 (Chicken) 1

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 2

Gadus_morhua_69_1 (Atlantic cod) 1

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 1

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 1

Danio_rerio_69_9 (Zebrafish) 1

Drosophila_melanogaster_69_5 (Fruit fly) 1

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Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 5

Homo_sapiens__(NCBI_version) (Human) 3

Protein_Data_Bank_(all_PDB_sequenc) 17

STRING_v9.0.5_(STRING) 21

Uniprot_2018_03_genome 1266

NCBI_2017_08_genome 448

TargetDB__(Targets) 2

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Domain combinations for 56112,54236,_gap_ superfamilies in groups of genomes