SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 56112,_gap_,48403,52540,_gap_,47986 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56112 - Protein kinase-like (PK-like)
48403 - Ankyrin repeat
52540 - P-loop containing nucleoside triphosphate hydrolases
47986 - DEATH domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Erinaceus_europaeus_76   (Western European hedgehog)   1
Petromyzon_marinus_76_7.0   (Sea lamprey)   1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1

Strains
Genome     Number
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1

Longest transcript per gene
Genome     Number
Erinaceus_europaeus_69   (Western European hedgehog)   1
Petromyzon_marinus_69_7.0   (Sea lamprey)   1

Others
Genome     Number
Loa_loa_v3.3_(Request)   (Eye worm)   2
NCBI_2017_08_genome 8
Uniprot_2018_03_genome 320

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