SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 56281,74853 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56281 - Metallo-hydrolase/oxidoreductase
74853 - Lamin A/C globular tail domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Desulfosporosinus_orientis_DSM_765 1
Coprothermobacter_proteolyticus_DSM_5265 1
Halothermothrix_orenii_H_168 1
Lysinibacillus_sphaericus_C3-41 1
Petrotoga_mobilis_SJ95 1
Methanosarcina_mazei_Go1 1
Methanosphaerula_palustris_E1-9c 1
Methanoculleus_bourgensis_MS2 1
Methanoculleus_marisnigri_JR1 1
Halorubrum_lacusprofundi_ATCC_49239 1
Haloarcula_marismortui_ATCC_43049 1
Halobacterium_salinarum_R1 1
Halobacterium_sp._NRC-1 1

Strains
Genome     Number
Desulfosporosinus_meridiei_DSM_13257 1
Halobacteroides_halobius_DSM_5150 1
Methanomethylovorans_hollandica_DSM_15978 1
Methanosarcina_mazei_Tuc01 1
Methanoregula_formicica_Methanoregula_formicicum_SMSP 1
Halorhabdus_tiamatea_SARL4B 2

Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 4
TargetDB__(Targets) 1
STRING_v9.0.5_(STRING) 11
Uniprot_2018_03_genome 672
NCBI_2017_08_genome 253

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