SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 56399,56399 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56399 - ADP-ribosylation
56399 - ADP-ribosylation

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Ochotona_princeps_76   (American pika)   0
Vicugna_pacos_76_1   (Alpaca)   0
Procavia_capensis_76_1   (Cape rock hyrax)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Petromyzon_marinus_76_7.0   (Sea lamprey)   2
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   2
Latimeria_chalumnae_76_1   (Coelacanth)   0
Poecilia_formosa_76   (Amazon molly)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   2
Astyanax_mexicanus_76   (Mexican tetra)   1
Danio_rerio_76_9   (Zebrafish)   0
Oikopleura_dioica 0
Adineta_vaga 0
Crassostrea_gigas_22   (Pacific oyster)   0
Helobdella_robusta_ 1
Tribolium_castaneum_3.0   (Red flour beetle)   1
Hymenolepis_microstoma_ 0
Schistosoma_mansoni_ 1
Monosiga_brevicollis_ 0
Fomitopsis_pinicola_FP-58527_SS1_v3.0 0
Tremella_mesenterica_   (Witches' butter)   1
Pinus_taeda   (Loblolly pine)   1
Glycine_max_v109   (Soybean)   0
Malus_domestica_v196   (Apple)   1
Actinidia_chinensis_Hongyang_ 1
Aquilegia_coerulea_v195 0
Triticum_urartu_22 1
Sorghum_bicolor_   (Sorghum)   0
Physcomitrella_patens 0
Tetrahymena_thermophila_SB210_1_ 0
Neospora_caninum 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 0
Symbiodinium_minutum_clade_B1_v1.2 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   2
Cryptococcus_neoformans_var._grubii_H99_ 1
Cryptococcus_neoformans_B-3501A_ 1
Cryptococcus_neoformans_JEC21_ 1
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Neospora_caninum_Nc-Liverpool_6.2 0
Clostridium_difficile_BI1 1
Clostridium_difficile_R20291 1
Clostridium_difficile_CD196 1
Clostridium_botulinum_BKT015925 1
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 0

Longest transcript per gene
Genome     Number
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Ochotona_princeps_69   (American pika)   0
Vicugna_pacos_69_1   (Alpaca)   0
Procavia_capensis_69_1   (Cape rock hyrax)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Petromyzon_marinus_69_7.0   (Sea lamprey)   2
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_69_1   (Coelacanth)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   2
Danio_rerio_69_9   (Zebrafish)   0

Others
Genome     Number
Lotus_japonicus__(Early_assembly) 0
Malus_x_domestica_(Duplicate)   (Apple)   1
NCBI_plasmid_sequences_(Plasmids) 6
PDB_chains_(SCOP_1.75)_(PDB) 2
Protozoadb_2010_08_(Protozoadb) 0
STRING_v9.0.5_(STRING) 5
Protein_Data_Bank_(all_PDB_sequenc) 28
Uniprot_2018_03_genome 256
NCBI_2017_08_genome 334

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