SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for 57184,57196,57196,57196,57184,_gap_,57184,57184,49854,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57184 - Growth factor receptor domain
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57184 - Growth factor receptor domain
57184 - Growth factor receptor domain
57184 - Growth factor receptor domain
49854 - Spermadhesin, CUB domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Bos_taurus_76_3.1   (Cattle)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Loxodonta_africana_76_3   (African savanna elephant)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Takifugu_rubripes_76_4   (Torafugu)   1

Longest transcript per gene
Genome     Number
Bos_taurus_69_3.1   (Cattle)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Loxodonta_africana_69_3   (African savanna elephant)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Gallus_gallus_69_2   (Chicken)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 768
NCBI_2017_08_genome 44

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]