SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for 57184,57196,57535,57535,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57184 - Growth factor receptor domain
57196 - EGF/Laminin
57535 - Complement control module/SCR domain
57535 - Complement control module/SCR domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   2
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Papio_anubis_76   (Olive baboon)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Bos_taurus_76_3.1   (Cattle)   0
Ovis_aries_76_3.1   (Sheep)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Equus_caballus_76_2   (Horse)   0
Loxodonta_africana_76_3   (African savanna elephant)   0
Saccoglossus_kowalevskii_v3.0 0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Tribolium_castaneum_3.0   (Red flour beetle)   0
Acropora_digitifera_v1.0 0
Hydra_vulgaris 0

Longest transcript per gene
Genome     Number
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Bos_taurus_69_3.1   (Cattle)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Equus_caballus_69_2   (Horse)   0
Loxodonta_africana_69_3   (African savanna elephant)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Anolis_carolinensis_69_2.0   (Green anole)   0

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   2
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 140
NCBI_2017_08_genome 20

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]