SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 57184,57581,_gap_,57196,57196 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57184 - Growth factor receptor domain
57581 - TB module/8-cys domain
57196 - EGF/Laminin
57196 - EGF/Laminin

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Macaca_mulatta_76_1   (Rhesus monkey)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Bos_taurus_76_3.1   (Cattle)   0
Felis_catus_76_6.2   (Domestic cat)   0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1
Astyanax_mexicanus_76   (Mexican tetra)   0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   0
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   0

Longest transcript per gene
Genome     Number
Macaca_mulatta_69_1   (Rhesus monkey)   0
Tupaia_belangeri_69   (Northern tree shrew)   0
Bos_taurus_69_3.1   (Cattle)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
NCBI_2017_08_genome 0
Uniprot_2018_03_genome 182

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