Domain combinations for 57184,_gap_,82895,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57184 - Growth factor receptor domain
82895 - TSP-1 type 1 repeat

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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• All genomes
• All eukaryote genomes (domain E)
• All bacterial genomes (domain B+A)
• All eubacterial genomes (domain B)
• All archaeal genomes (domain A)

Groups of genomes may be slower than individual genomes.

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Strains

Genome		Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)	(Tropical clawed frog)	5

Longest transcript per gene

Genome		Number
Pan_troglodytes_69_2.1.4	(Chimpanzee)	2
Gorilla_gorilla_69_3.1	(Western gorilla)	1
Pongo_abelii_69_2	(Sumatran orangutan)	1
Nomascus_leucogenys_69_1.0	(Northern white-cheeked gibbon)	2
Macaca_mulatta_69_1	(Rhesus monkey)	1
Callithrix_jacchus_69_3.2.1	(White-tufted-ear marmoset)	1
Otolemur_garnettii_69_3	(Small-eared galago)	2
Microcebus_murinus_69_1	(Gray mouse lemur)	2
Mus_musculus_69_38	(House mouse)	1
Ochotona_princeps_69	(American pika)	1
Tupaia_belangeri_69	(Northern tree shrew)	1
Sus_scrofa_69_10.2	(Pig)	2
Tursiops_truncatus_69_1	(Bottlenose dolphin)	1
Equus_caballus_69_2	(Horse)	1
Pteropus_vampyrus_69_1	(Large flying fox)	1
Erinaceus_europaeus_69	(Western European hedgehog)	2
Procavia_capensis_69_1	(Cape rock hyrax)	1
Loxodonta_africana_69_3	(African savanna elephant)	1
Echinops_telfairi_69	(Small Madagascar hedgehog)	2
Macropus_eugenii_69_1.0	(Tammar wallaby)	1
Sarcophilus_harrisii_69_7.0	(Tasmanian devil)	1
Monodelphis_domestica_69_5	(Gray short-tailed opossum)	2
Petromyzon_marinus_69_7.0	(Sea lamprey)	2
Meleagris_gallopavo_69_2	(Turkey)	1
Pelodiscus_sinensis_69_1.0	(Chinese soft-shelled turtle)	3
Anolis_carolinensis_69_2.0	(Green anole)	1
Latimeria_chalumnae_69_1	(Coelacanth)	2
Gadus_morhua_69_1	(Atlantic cod)	3
Tetraodon_nigroviridis_69_8	(Spotted green pufferfish)	1
Takifugu_rubripes_69_4	(Torafugu)	3
Gasterosteus_aculeatus_69_1	(Three-spined stickleback)	1
Xiphophorus_maculatus_69_4.4.2	(Southern platyfish)	2
Oreochromis_niloticus_69_1.0	(Nile tilapia)	3
Danio_rerio_69_9	(Zebrafish)	1
Ciona_savignyi_69_2.0	(Pacific transparent sea squirt)	1

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Others

Genome		Number
Homo_sapiens_75_37_(old_version_GRC)	(Human)	2
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)	(House mouse)	1
STRING_v9.0.5_(STRING)		22
Uniprot_2018_03_genome		1683
NCBI_2017_08_genome		265

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