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  Home > SCOP hierarchy > Domain combination - 57196,57196,57196,57196,57196,57196,57196,57196,57184,57196,57196,57196,57196,_gap_,57184,57196,57196,57196,57196,57184,57196,_gap_,90193,90193,_gap_,48403,_gap_

Domain combinations for 57196,57196,57196,57196,57196,57196,57196,57196,57184,57196,57196,57196,57196,_gap_,57184,57196,57196,57196,57196,57184,57196,_gap_,90193,90193,_gap_,48403,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57184 - Growth factor receptor domain
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57184 - Growth factor receptor domain
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57184 - Growth factor receptor domain
57196 - EGF/Laminin
90193 - Notch domain
90193 - Notch domain
48403 - Ankyrin repeat

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   1

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1
STRING_v9.0.5_(STRING) 1
NCBI_2017_08_genome 2
Uniprot_2018_03_genome 618

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.