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Domain combinations for 57424,57424,57424,57196,63825,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57196 - EGF/Laminin
63825 - YWTD domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Petromyzon_marinus_76_7.0   (Sea lamprey)   0
Latimeria_chalumnae_76_1   (Coelacanth)   0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_76   (Vase tunicate)   0
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   0
Adineta_vaga 0
Octopus_bimaculoides_280 0
Lottia_gigantea_   (Owl limpet)   0
Danaus_plexippus_OGS1.0   (Monarch butterfly)   0
Heliconius_melpomene_   (Postman butterfly)   0
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   0
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   0
Tribolium_castaneum_3.0   (Red flour beetle)   0
Acyrthosiphon_pisum_   (Pea aphid)   0
Tetranychus_urticae_   (Two-spotted spider mite)   0
Acropora_digitifera_v1.0 1

Longest transcript per gene
Genome     Number
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Petromyzon_marinus_69_7.0   (Sea lamprey)   0
Latimeria_chalumnae_69_1   (Coelacanth)   0
Ciona_intestinalis_69   (Vase tunicate)   0

Others
Genome     Number
NCBI_2017_08_genome 2
Uniprot_2018_03_genome 18
STRING_v9.0.5_(STRING) 0

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