SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 57424,57424,57424,57424,57424,57184,63825,_gap_,63825,_gap_,57424,57424,57424,57424,57424,57424,57424,57424,57184,63825,_gap_,63825,_gap_,63825,57184,63825,_gap_,57424,57424,57424,57424,57424,57424,57424,57424,57424,57424,57196,57196,63825,_gap_,57424,57424,57424,57424,57424,57424,57424,_gap_,57424,57424,57196,57196,63825,57184,57196,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57184 - Growth factor receptor domain
63825 - YWTD domain
63825 - YWTD domain
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57184 - Growth factor receptor domain
63825 - YWTD domain
63825 - YWTD domain
63825 - YWTD domain
57184 - Growth factor receptor domain
63825 - YWTD domain
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57196 - EGF/Laminin
57196 - EGF/Laminin
63825 - YWTD domain
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57196 - EGF/Laminin
57196 - EGF/Laminin
63825 - YWTD domain
57184 - Growth factor receptor domain
57196 - EGF/Laminin

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1

Longest transcript per gene
Genome     Number
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 1063

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