SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 57440,57196,57603,57440,_gap_,50494 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57440 - Kringle-like
57196 - EGF/Laminin
57603 - FnI-like domain
57440 - Kringle-like
50494 - Trypsin-like serine proteases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1
Takifugu_rubripes_76_4   (Torafugu)   1
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1

Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   1

Longest transcript per gene
Genome     Number
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Takifugu_rubripes_69_4   (Torafugu)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 2
NCBI_2017_08_genome 4
Uniprot_2018_03_genome 80

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