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Home > SCOP hierarchy > Domain combination - 57783,47954,_gap_

Domain combinations for 57783,47954,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57783 - Zinc beta-ribbon
47954 - Cyclin-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 1

Pan_troglodytes_76_2.1.4 (Chimpanzee) 1

Gorilla_gorilla_76_3.1 (Western gorilla) 1

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 1

Papio_anubis_76 (Olive baboon) 1

Macaca_mulatta_76_1 (Rhesus monkey) 1

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 1

Otolemur_garnettii_76_3 (Small-eared galago) 1

Microcebus_murinus_76_1 (Gray mouse lemur) 1

Rattus_norvegicus_76_5.0 (Norway rat) 1

Mus_musculus_76_38 (House mouse) 1

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 2

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 1

Cavia_porcellus_76_3 (Domestic guinea pig) 1

Oryctolagus_cuniculus_76_2 (Rabbit) 2

Tupaia_belangeri_76 (Northern tree shrew) 1

Sus_scrofa_76_10.2 (Pig) 1

Bos_taurus_76_3.1 (Cattle) 1

Ovis_aries_76_3.1 (Sheep) 1

Tursiops_truncatus_76_1 (Bottlenose dolphin) 1

Mustela_putorius_furo_76_1.0 (Domestic ferret) 1

Ailuropoda_melanoleuca_76_1 (Giant panda) 1

Canis_familiaris_76_3.1 (Dog) 1

Felis_catus_76_6.2 (Domestic cat) 1

Equus_caballus_76_2 (Horse) 1

Myotis_lucifugus_76_2.0 (Little brown bat) 1

Pteropus_vampyrus_76_1 (Large flying fox) 1

Erinaceus_europaeus_76 (Western European hedgehog) 1

Procavia_capensis_76_1 (Cape rock hyrax) 1

Loxodonta_africana_76_3 (African savanna elephant) 2

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 1

Choloepus_hoffmanni_76_1 (Hoffmann's two-fingered sloth) 1

Gallus_gallus_76_4 (Chicken) 2

Ficedula_albicollis_76_1.0 (Collared flycatcher) 1

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 1

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 1

Astyanax_mexicanus_76 (Mexican tetra) 1

Strongylocentrotus_purpuratus_v3.1 (Purple sea urchin) 1

Mnemiopsis_leidyi (Sea walnut) 1

Mortierella_verticillata_NRRL_6337_ 1

Rhizopus_oryzae_RA_99-880_ 1

Entamoeba_invadens_1.2 1

Citrus_sinensis_v154 (Sweet orange) 1

Malus_domestica_v196 (Apple) 1

Brachypodium_distachyon_ (Stiff brome) 1

Oryza_barthii_22 (African wild rice) 1

Oryza_meridionalis_22 1

Oryza_glaberrima (African rice) 1

Oryza_punctata_22 1

Oryza_nivara_22 1

Oryza_brachyantha_22 (Malo sina) 1

Oryza_sativa_ssp._japonica_5.0 (Japanese rice) 2

Oryza_sativa_v193 (Rice) 2

Panicum_virgatum_v202 (Switchgrass) 1

Zea_mays_subsp._mays_ (Maize) 1

Zea_mays_v181 (Maize) 1

Sorghum_bicolor_ (Sorghum) 1

Musa_acuminata_22 (Wild Malaysian banana) 1

Chlorella_variabilis_sp._NC64A_ 1

Micromonas_pusilla_CCMP1545_v3.0 1

Cyanophora_paradoxa_ 1

Ectocarpus_siliculosus 1

Perkinsus_marinus_ATCC_50983_ 1

Trichomonas_vaginalis_ 1

halophilic_archaeon_DL31 1

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Strains
Genome Number

Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2) (Tropical clawed frog) 3

Oryza_sativa_ssp._Indica_(Subspecies) (Long-grained rice) 1

Natrinema_pellirubrum_DSM_15624 1

Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 1

Pan_troglodytes_69_2.1.4 (Chimpanzee) 1

Gorilla_gorilla_69_3.1 (Western gorilla) 1

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 1

Macaca_mulatta_69_1 (Rhesus monkey) 1

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 1

Otolemur_garnettii_69_3 (Small-eared galago) 1

Microcebus_murinus_69_1 (Gray mouse lemur) 1

Rattus_norvegicus_69_3.4 (Norway rat) 1

Mus_musculus_69_38 (House mouse) 1

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 2

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 1

Cavia_porcellus_69_3 (Domestic guinea pig) 1

Oryctolagus_cuniculus_69_2 (Rabbit) 1

Tupaia_belangeri_69 (Northern tree shrew) 1

Sus_scrofa_69_10.2 (Pig) 1

Bos_taurus_69_3.1 (Cattle) 1

Tursiops_truncatus_69_1 (Bottlenose dolphin) 1

Mustela_putorius_furo_69_1.0 (Domestic ferret) 1

Ailuropoda_melanoleuca_69_1 (Giant panda) 1

Canis_familiaris_69_3.1 (Dog) 1

Felis_catus_69 (Domestic cat) 1

Equus_caballus_69_2 (Horse) 1

Myotis_lucifugus_69_2.0 (Little brown bat) 1

Pteropus_vampyrus_69_1 (Large flying fox) 1

Erinaceus_europaeus_69 (Western European hedgehog) 1

Procavia_capensis_69_1 (Cape rock hyrax) 1

Loxodonta_africana_69_3 (African savanna elephant) 1

Dasypus_novemcinctus_69_2 (Nine-banded armadillo) 1

Choloepus_hoffmanni_69_1 (Hoffmann's two-fingered sloth) 1

Gallus_gallus_69_2 (Chicken) 1

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 1

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 1

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Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 1

Homo_sapiens__(NCBI_version) (Human) 1

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 1

Brugia_malayi_v1.0_(Duplicate) (Agent of lymphatic filariasis) 1

Malus_x_domestica_(Duplicate) (Apple) 1

Nicotiana_benthamiana_0.4.4_(Early_draft) 1

NCBI_plasmid_sequences_(Plasmids) 1

NCBI_viral_sequences_(Viral) 1

Protozoadb_2010_08_(Protozoadb) 2

STRING_v9.0.5_(STRING) 23

Uniprot_2018_03_genome 936

NCBI_2017_08_genome 171

TargetDB__(Targets) 1

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Domain combinations for 57783,47954,_gap_ superfamilies in groups of genomes