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Home > SCOP hierarchy > Domain combination - 57850,57845,_gap_,57850,57845,_gap_,49899

Domain combinations for 57850,57845,_gap_,57850,57845,_gap_,49899 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57850 - RING/U-box
57845 - B-box zinc-binding domain
57850 - RING/U-box
57845 - B-box zinc-binding domain
49899 - Concanavalin A-like lectins/glucanases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 1

Pongo_abelii_76_2 (Sumatran orangutan) 1

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 0

Macaca_mulatta_76_1 (Rhesus monkey) 1

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 1

Oryctolagus_cuniculus_76_2 (Rabbit) 1

Sus_scrofa_76_10.2 (Pig) 1

Bos_taurus_76_3.1 (Cattle) 1

Canis_familiaris_76_3.1 (Dog) 1

Equus_caballus_76_2 (Horse) 2

Myotis_lucifugus_76_2.0 (Little brown bat) 2

Procavia_capensis_76_1 (Cape rock hyrax) 1

Echinops_telfairi_76 (Small Madagascar hedgehog) 1

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 1

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 2

Meleagris_gallopavo_76_2 (Turkey) 1

Lepisosteus_oculatus_76 (Spotted gar) 1

Poecilia_formosa_76 (Amazon molly) 3

Oreochromis_niloticus_76_1.0 (Nile tilapia) 1

Astyanax_mexicanus_76 (Mexican tetra) 1

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Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 2

Pongo_abelii_69_2 (Sumatran orangutan) 1

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 1

Macaca_mulatta_69_1 (Rhesus monkey) 1

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 1

Oryctolagus_cuniculus_69_2 (Rabbit) 1

Sus_scrofa_69_10.2 (Pig) 1

Bos_taurus_69_3.1 (Cattle) 1

Canis_familiaris_69_3.1 (Dog) 1

Felis_catus_69 (Domestic cat) 1

Equus_caballus_69_2 (Horse) 2

Myotis_lucifugus_69_2.0 (Little brown bat) 2

Procavia_capensis_69_1 (Cape rock hyrax) 1

Echinops_telfairi_69 (Small Madagascar hedgehog) 1

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 2

Meleagris_gallopavo_69_2 (Turkey) 1

Anolis_carolinensis_69_2.0 (Green anole) 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 1

Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 1

Homo_sapiens__(NCBI_version) (Human) 1

Uniprot_2018_03_genome 572

STRING_v9.0.5_(STRING) 8

NCBI_2017_08_genome 23

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