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Domain combinations for 57850,_gap_,57850,57845,_gap_,49899 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57850 - RING/U-box
57850 - RING/U-box
57845 - B-box zinc-binding domain
49899 - Concanavalin A-like lectins/glucanases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   2
Mus_musculus_76_38   (House mouse)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Equus_caballus_76_2   (Horse)   1
Pteropus_vampyrus_76_1   (Large flying fox)   2
Loxodonta_africana_76_3   (African savanna elephant)   1
Poecilia_formosa_76   (Amazon molly)   1

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Mus_musculus_69_38   (House mouse)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Equus_caballus_69_2   (Horse)   1
Pteropus_vampyrus_69_1   (Large flying fox)   2
Loxodonta_africana_69_3   (African savanna elephant)   1

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   2
Homo_sapiens__(NCBI_version)   (Human)   2
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
STRING_v9.0.5_(STRING) 5
Uniprot_2018_03_genome 399
NCBI_2017_08_genome 73

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