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Domain combinations for 57850,_gap_,63748,_gap_,63748,50199,63748,_gap_,63748,_gap_,63748,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57850 - RING/U-box
63748 - Tudor/PWWP/MBT
63748 - Tudor/PWWP/MBT
50199 - Staphylococcal nuclease
63748 - Tudor/PWWP/MBT
63748 - Tudor/PWWP/MBT
63748 - Tudor/PWWP/MBT

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   1
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   1
Otolemur_garnettii_76_3   (Small-eared galago)   1
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Bos_taurus_76_3.1   (Cattle)   1
Ovis_aries_76_3.1   (Sheep)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Canis_familiaris_76_3.1   (Dog)   3
Myotis_lucifugus_76_2.0   (Little brown bat)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Otolemur_garnettii_69_3   (Small-eared galago)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Bos_taurus_69_3.1   (Cattle)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Canis_familiaris_69_3.1   (Dog)   1
Myotis_lucifugus_69_2.0   (Little brown bat)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   2
Homo_sapiens__(NCBI_version)   (Human)   2
STRING_v9.0.5_(STRING) 4
Uniprot_2018_03_genome 1160
NCBI_2017_08_genome 75
TargetDB__(Targets) 2

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