SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 57863,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57863 - ArfGap/RecO-like zinc finger

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   28
Pan_troglodytes_76_2.1.4   (Chimpanzee)   6
Gorilla_gorilla_76_3.1   (Western gorilla)   9
Pongo_abelii_76_2   (Sumatran orangutan)   8
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   8
Papio_anubis_76   (Olive baboon)   9
Macaca_mulatta_76_1   (Rhesus monkey)   12
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   19
Otolemur_garnettii_76_3   (Small-eared galago)   7
Microcebus_murinus_76_1   (Gray mouse lemur)   6
Rattus_norvegicus_76_5.0   (Norway rat)   6
Mus_musculus_76_38   (House mouse)   23
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   7
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   6
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   7
Cavia_porcellus_76_3   (Domestic guinea pig)   7
Oryctolagus_cuniculus_76_2   (Rabbit)   9
Ochotona_princeps_76   (American pika)   5
Tupaia_belangeri_76   (Northern tree shrew)   7
Sus_scrofa_76_10.2   (Pig)   6
Bos_taurus_76_3.1   (Cattle)   8
Ovis_aries_76_3.1   (Sheep)   7
Vicugna_pacos_76_1   (Alpaca)   5
Tursiops_truncatus_76_1   (Bottlenose dolphin)   7
Mustela_putorius_furo_76_1.0   (Domestic ferret)   8
Ailuropoda_melanoleuca_76_1   (Giant panda)   7
Canis_familiaris_76_3.1   (Dog)   8
Felis_catus_76_6.2   (Domestic cat)   7
Equus_caballus_76_2   (Horse)   8
Myotis_lucifugus_76_2.0   (Little brown bat)   9
Pteropus_vampyrus_76_1   (Large flying fox)   8
Sorex_araneus_76_1   (European shrew)   5
Erinaceus_europaeus_76   (Western European hedgehog)   6
Procavia_capensis_76_1   (Cape rock hyrax)   6
Loxodonta_africana_76_3   (African savanna elephant)   12
Echinops_telfairi_76   (Small Madagascar hedgehog)   6
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   6
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   5
Macropus_eugenii_76_1.0   (Tammar wallaby)   4
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   6
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   6
Ornithorhynchus_anatinus_76_5   (Platypus)   5
Saccoglossus_kowalevskii_v3.0 16
Petromyzon_marinus_76_7.0   (Sea lamprey)   3
Meleagris_gallopavo_76_2   (Turkey)   7
Gallus_gallus_76_4   (Chicken)   5
Anas_platyrhynchos_76_1.0   (Mallard)   6
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   6
Ficedula_albicollis_76_1.0   (Collared flycatcher)   5
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   5
Anolis_carolinensis_76_2.0   (Green anole)   6
Xenopus_laevis_   (African clawed frog)   16
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   8
Latimeria_chalumnae_76_1   (Coelacanth)   12
Lepisosteus_oculatus_76   (Spotted gar)   11
Gadus_morhua_76_1   (Atlantic cod)   14
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   7
Takifugu_rubripes_76_4   (Torafugu)   23
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   9
Oryzias_latipes_76_1   (Japanese medaka)   8
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   9
Poecilia_formosa_76   (Amazon molly)   7
Oreochromis_niloticus_76_1.0   (Nile tilapia)   10
Astyanax_mexicanus_76   (Mexican tetra)   6
Danio_rerio_76_9   (Zebrafish)   14
Oikopleura_dioica 6
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   3
Ciona_intestinalis_76   (Vase tunicate)   4
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   2
Adineta_vaga 12
Octopus_bimaculoides_280 4
Crassostrea_gigas_22   (Pacific oyster)   4
Lottia_gigantea_   (Owl limpet)   3
Helobdella_robusta_ 2
Capitella_sp._I_ 3
Danaus_plexippus_OGS1.0   (Monarch butterfly)   4
Heliconius_melpomene_   (Postman butterfly)   3
Bombyx_mori_   (Domestic silkworm)   2
Nasonia_vitripennis_   (Jewel wasp)   4
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   5
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   4
Linepithema_humile_v1.1   (Argentine ant)   3
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   2
Solenopsis_invicta_v.2.2.3   (Red fire ant)   3
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   4
Atta_cephalotes_v1.1 3
Camponotus_floridanus_v3.3   (Florida carpenter ant)   3
Lucilia_cuprina   (Australian sheep blowfly)   2
Drosophila_grimshawi_1.3 4
Drosophila_willistoni_1.3 4
Drosophila_pseudoobscura_2.13 3
Drosophila_persimilis_1.3 3
Drosophila_suzukii 3
Drosophila_yakuba_1.3 3
Drosophila_simulans_1.3 4
Drosophila_sechellia_1.3 3
Drosophila_melanogaster_76_5   (Fruit fly)   12
Drosophila_erecta_1.3 3
Drosophila_ananassae_1.3 3
Drosophila_virilis_1.2 4
Drosophila_mojavensis_1.3 4
Megaselia_scalaris_22 3
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   4
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   2
Anopheles_darlingi_22   (American malaria mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   7
Tribolium_castaneum_3.0   (Red flour beetle)   4
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   4
Acyrthosiphon_pisum_   (Pea aphid)   3
Rhodnius_prolixus_22 2
Daphnia_pulex_   (Common water flea)   3
Strigamia_maritima_22 4
Sarcoptes_scabiei 4
Tetranychus_urticae_   (Two-spotted spider mite)   6
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   3
Pristionchus_pacificus_ 2
Meloidogyne_incognita_   (Southern root-knot nematode)   2
Meloidogyne_hapla_ 2
Onchocerca_volvulus_22 3
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   3
Caenorhabditis_japonica_ 3
Caenorhabditis_brenneri_ 3
Caenorhabditis_remanei_ 3
Caenorhabditis_elegans_76_235   (Roundworm)   4
Caenorhabditis_briggsae_2 3
Trichinella_spiralis_22 1
Hymenolepis_microstoma_ 4
Echinococcus_multilocularis_ 4
Echinococcus_granulosus_ 4
Taenia_solium_   (Pork tapeworm)   3
Schistosoma_mansoni_ 3
Mnemiopsis_leidyi   (Sea walnut)   4
Thelohanellus_kitauei 2
Acropora_digitifera_v1.0 2
Nematostella_vectensis_1.0   (Starlet sea anemone)   1
Hydra_vulgaris 3
Amphimedon_queenslandica 3
Trichoplax_adhaerens_ 3
Proterospongia_sp._ATCC_50818_ 3
Monosiga_brevicollis_ 2
Sphaeroforma_arctica_JP610_ 3
Capsaspora_owczarzaki_ATCC_30864_ 4
Conidiobolus_coronatus_NRRL28638_v1.0 1
Mortierella_verticillata_NRRL_6337_ 5
Phycomyces_blakesleeanus_ 3
Rhizopus_oryzae_RA_99-880_ 4
Mucor_circinelloides_ 2
Rhizomucor_miehei_CAU432_ 2
Malassezia_globosa_CBS_7966_ 2
Sporisorium_reilianum_22 3
Ustilago_maydis_ 3
Mixia_osmundae_IAM_14324_v1.0 3
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 4
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 2
Melampsora_laricis-populina_ 4
Rhodotorula_graminis_WP1_v1.0 1
Sporobolomyces_roseus_IAM_13481_ 0
Microbotryum_violaceum_22 5
Wallemia_sebi_v1.0 3
Sphaerobolus_stellatus_v1.0 4
Piloderma_croceum_F_1598_v1.0 1
Serpula_lacrymans_var._lacrymans_S7.9_ 3
Coniophora_puteana 3
Hydnomerulius_pinastri_v2.0 5
Paxillus_rubicundulus_Ve08.2h10_v1.0 4
Pisolithus_microcarpus_441_v1.0 4
Pisolithus_tinctorius_Marx_270_v1.0 4
Scleroderma_citrinum_Foug_A_v1.0 4
Coprinopsis_cinerea_okayama7_130_v3 4
Pleurotus_ostreatus_   (Oyster mushroom)   2
Amanita_thiersii_Skay4041_v1.0 4
Amanita_muscaria_Koide_v1.0   (Fly agaric)   4
Galerina_marginata_v1.0 4
Hebeloma_cylindrosporum_h7_v2.0 4
Laccaria_bicolor_S238N-H82_ 3
Agaricus_bisporus_var._bisporus_ 4
Schizophyllum_commune_ 3
Stereum_hirsutum_FP-91666_SS1__v1.0 4
Heterobasidion_annosum_ 4
Gloeophyllum_trabeumv1.0 4
Punctularia_strigosozonata_v1.0 4
Sebacina_vermifera_MAFF_305830_v1.0 2
Fomitiporia_mediterranea_v1.0 3
Tulasnella_calospora_AL13/4D_v1.0 4
Postia_placenta_ 5
Wolfiporia_cocos_MD-104_SS10__v1.0 4
Fomitopsis_pinicolav1.0 4
Fomitopsis_pinicola_FP-58527_SS1_v3.0 4
Phanerochaete_chrysosporium_RP-78_2.1 3
Dichomitus_squalens 3
Trametes_versicolor_v1.0 4
Tremella_mesenterica_   (Witches' butter)   3
Daldinia_eschscholzii_EC12_v1.0 3
Apiospora_montagnei_NRRL_25634_v1.0 3
Magnaporthe_poae_ATCC_64411_22 1
Magnaporthe_grisea_70-15_ 3
Podospora_anserina_ 3
Sporotrichum_thermophile_ATCC_42464_ 3
Thielavia_terrestris_NRRL_8126_ 3
Chaetomium_globosum_CBS_148.51_ 3
Neurospora_tetrasperma_ 3
Neurospora_discreta_FGSC_8579_ 3
Neurospora_crassa_OR74A_ 3
Cryphonectria_parasitica_   (Chestnut blight fungus)   3
Verticillium_albo-atrum_VaMs.102_ 4
Verticillium_dahliae_VdLs.17_ 3
Acremonium_alcalophilumv_1.0 3
Glomerella_graminicola_22 3
Fusarium_graminearum_ 3
Nectria_haematococca_mpVI_ 3
Fusarium_oxysporum_f._sp._lycopersici_4286_ 3
Fusarium_verticillioides_7600_ 3
Trichoderma_asperellum_CBS_433.97_v1.0 3
Trichoderma_atroviride_ 3
Trichoderma_citrinoviride_v1.0 3
Trichoderma_reesei_1.2 3
Trichoderma_virens_Gv29-8_ 3
Trichoderma_longibrachiatum_ATCC_18648_v1.0 3
Trichoderma_harzianum_CBS_226.95_v1.0 3
Amorphotheca_resinae_v1.0   (Creosote fungus)   3
Botrytis_cinerea_B05.10_ 3
Sclerotinia_sclerotiorum_ 3
Blumeria_graminis_22 3
Didymella_exigua_CBS_183.55_v1.0 2
Leptosphaeria_maculans_22 2
Setosphaeria_turcica_v1.0 3
Cochliobolus_miyabeanus_ATCC_44560_v1.0 3
Cochliobolus_victoriae_FI3_v1.0 3
Cochliobolus_carbonum_26-R-13_v1.0 3
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   3
Alternaria_brassicicola_ 2
Cochliobolus_lunatus_m118_v2.0 3
Pyrenophora_teres_f._teres_22 2
Pyrenophora_tritici-repentis_ 3
Stagonospora_nodorum_ 3
Mycosphaerella_graminicola_IPO323_ 3
Zasmidium_cellare_ATCC_36951_v1.0 3
Dothistroma_septosporum 3
Septoria_musiva_v1.0 4
Mycosphaerella_fijiensis_CIRAD86_ 2
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 3
Paracoccidioides_brasiliensis_Pb18_ 2
Coccidioides_posadasii_RMSCC_3488_ 3
Coccidioides_immitis_RS_ 4
Ajellomyces_dermatitidis_SLH14081_ 3
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 3
Microsporum_canis_CBS_113480_ 3
Trichophyton_equinum_CBS_127.97_ 4
Trichophyton_verrucosum_HKI_0517_ 1
Arthroderma_benhamiae_CBS_112371_ 1
Trichophyton_tonsurans_CBS_112818_ 3
Trichophyton_rubrum_CBS_118892_ 3
Uncinocarpus_reesii_1704_ 2
Aspergillus_zonatus_v1.0 3
Penicillium_chrysogenum_Wisconsin_54-1255_ 3
Penicillium_chrysogenum_v1.0 3
Aspergillus_acidus_v1.0 3
Aspergillus_fumigatus_Af293 3
Aspergillus_brasiliensis_v1.0 3
Aspergillus_nidulans_FGSC_A4_ 3
Aspergillus_sydowii_v1.0 3
Aspergillus_versicolor_v1.0 3
Aspergillus_glaucus 3
Aspergillus_carbonarius_ITEM_5010_ 3
Neosartorya_fischeri_NRRL_181_ 3
Aspergillus_terreus_NIH2624_ 3
Aspergillus_tubingensis_v1.0 1
Aspergillus_wentii_v1.0 3
Aspergillus_oryzae_RIB40_ 3
Aspergillus_niger_22 3
Aspergillus_niger_ATCC_1015_ 2
Aspergillus_flavus_NRRL3357_ 3
Aspergillus_clavatus_NRRL_1_ 2
Penicillium_marneffei_ATCC_18224_ 4
Tuber_melanosporum_Mel28_22 3
Tuber_melanosporum_Vittad_   (Perigord truffle)   3
Hansenula_polymorpha_v2.0 3
Dekkera_bruxellensis_CBS_2499_v2.0 4
Pichia_membranifaciensv1.0 2
Candida_tanzawaensis_NRRL_Y-17324__v1.0 4
Candida_dubliniensis_CD36_ 4
Candida_tropicalis_MYA-3404_ 4
Candida_parapsilosis_ 3
Candida_albicans_SC5314 3
Lodderomyces_elongisporus_NRRL_YB-4239_ 3
Babjeviella_inositovora_NRRL_Y-12698_v1.0 4
Pichia_stipitis_CBS_6054_ 4
Candida_guilliermondii_ATCC_6260_ 3
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 3
Debaromyces_hansenii 3
Wickerhamomyces_anomalus 2
Pichia_pastoris_GS115_ 4
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 3
Yarrowia_lipolytica_CLIB122 3
Candida_lusitaniae_ATCC_42720_ 3
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 2
Vanderwaltozyma_polyspora_DSM_70294_ 3
Candida_glabrata_CBS138 4
Kluyveromyces_thermotolerans_CBS_6340 4
Lachancea_kluyveri_ 3
Kluyveromyces_waltii 4
Ashbya_gossypii_ATCC_10895_ 3
Zygosaccharomyces_rouxii_ 3
Saccharomyces_mikatae_MIT 4
Saccharomyces_paradoxus_MIT 4
Saccharomyces_cerevisiae_76   (Baker's yeast)   4
Saccharomyces_bayanus_MIT 4
Kluyveromyces_lactis 4
Schizosaccharomyces_cryophilus_OY26_22 3
Schizosaccharomyces_octosporus_yFS286_ 3
Schizosaccharomyces_japonicus_yFS275_ 3
Schizosaccharomyces_pombe   (Fission yeast)   3
Catenaria_anguillulae_PL171_v1.0 3
Allomyces_macrogynus_ATCC_38327_ 5
Spizellomyces_punctatus_DAOM_BR117_ 3
Dictyostelium_discoideum 5
Dictyostelium_purpureum_ 3
Entamoeba_dispar_1.2 6
Entamoeba_invadens_1.2 6
Entamoeba_histolytica_1 7
Selaginella_moellendorffii_ 4
Pinus_taeda   (Loblolly pine)   4
Picea_abies   (Norway spruce)   5
Eucalyptus_grandis_v201   (Rose gum)   10
Theobroma_cacao_B97-61/B2_v1   (Cacao)   8
Gossypium_raimondii_v221 65
Citrus_clementina_v165 15
Citrus_sinensis_v154   (Sweet orange)   39
Thellungiella_halophila_v173 14
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   16
Capsella_rubella_v183 11
Arabidopsis_lyrata_   (Lyrate rockcress)   10
Arabidopsis_thaliana_10   (Thale cress)   19
Carica_papaya_   (Papaya)   6
Medicago_truncatula_   (Barrel medic)   22
Phaseolus_vulgaris_v186   (French bean)   14
Glycine_max_v109   (Soybean)   28
Cucumis_sativus_v122   (Cucumber)   11
Fragaria_vesca_   (Wild strawberry)   4
Malus_domestica_v196   (Apple)   12
Prunus_persica_v139   (Peach)   8
Linum_usitatissimum_v200   (Flax)   18
Manihot_esculenta_v147   (Cassava)   12
Populus_trichocarpa_v156   (Black cottonwood)   13
Vitis_vinifera_   (Wine grape)   9
Mimulus_guttatus_v140   (Spotted monkey flower)   10
Solanum_lycopersicum_v.2.3   (Tomato)   12
Solanum_tuberosum_   (Potato)   19
Actinidia_chinensis_Hongyang_ 10
Aquilegia_coerulea_v195 15
Triticum_urartu_22 6
Triticum_aestivum_22   (Bread wheat)   17
Aegilops_tauschii_22 6
Brachypodium_distachyon_   (Stiff brome)   11
Oryza_barthii_22   (African wild rice)   8
Oryza_meridionalis_22 11
Oryza_glumaepatula_22 9
Oryza_glaberrima   (African rice)   5
Oryza_punctata_22 12
Oryza_nivara_22 16
Oryza_brachyantha_22   (Malo sina)   7
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   13
Oryza_sativa_v193   (Rice)   13
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   10
Panicum_virgatum_v202   (Switchgrass)   15
Setaria_italica_v164   (Foxtail millet)   9
Zea_mays_subsp._mays_   (Maize)   18
Zea_mays_v181   (Maize)   17
Sorghum_bicolor_   (Sorghum)   7
Musa_balbisiana   (Balbis banana)   11
Musa_acuminata_22   (Wild Malaysian banana)   21
Amborella_trichopoda_22 6
Physcomitrella_patens 7
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Asterochloris_sp._Cgr/DA1pho_v1.0 2
Chlorella_variabilis_sp._NC64A_ 1
Chlorella_vulgaris_ 2
Volvox_carteri_f._nagariensis_ 3
Volvox_carteri_v199 4
Chlamydomonas_reinhardtii_4.0 3
Ostreococcus_sp._RCC809_ 1
Ostreococcus_lucimarinus_CCE9901_ 4
Ostreococcus_tauri_ 3
Bathycoccus_prasinos_ 6
Micromonas_sp._RCC299_ 3
Micromonas_pusilla_CCMP1545_v3.0 1
Cyanidioschyzon_merolae_strain_10D_22 3
Cyanidioschyzon_merolae 3
Porphyridium_purpureum_02_2012 4
Thecamonas_trahens_ATCC_50062_ 2
Bigelowiella_natans_CCMP2755_22 4
Giardia_lamblia_2.3 2
Cyanophora_paradoxa_ 3
Leishmania_mexicana_2.4 4
Leishmania_major_strain_Friedlin_ 5
Leishmania_infantum_JPCM5_2.4 5
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 5
Trypanosoma_vivax_ 11
Trypanosoma_cruzi_strain_CL_Brener 3
Trypanosoma_congolense_2.4 8
Trypanosoma_brucei_gambiense_v4.1 4
Trypanosoma_brucei_TREU927_v4.1 4
Ectocarpus_siliculosus 4
Aureococcus_anophagefferens_ 3
Albugo_laibachii_22 6
Pythium_iwayamai_DAOM_BR242034_22 3
Pythium_arrhenomanes_ATCC_12531_22 4
Pythium_ultimum_v1.7-2 5
Pythium_aphanidermatum_DAOM_BR444_22 5
Pythium_irregulare_DAOM_BR486_22 4
Pythium_vexans_DAOM_BR484_22 5
Phytophthora_ramorum_1.1   (Sudden oak death agent)   3
Phytophthora_sojae_1.1 4
Phytophthora_infestans_T30-4_ 6
Phytophthora_capsici_ 5
Hyaloperonospora_arabidopsidis_22 6
Phaeodactylum_tricornutumCCAP_1055/1 4
Fragilariopsis_cylindrus 5
Thalassiosira_pseudonana_CCMP1335 3
Perkinsus_marinus_ATCC_50983_ 9
Paramecium_tetraurelia_ 11
Tetrahymena_thermophila_SB210_1_ 2
Ichthyophthirius_multifiliis_strain_G5_ 2
Cryptosporidium_hominis 3
Cryptosporidium_muris 4
Cryptosporidium_parvum_Iowa_II 4
Neospora_caninum 1
Toxoplasma_gondii_VEG 3
Toxoplasma_gondii_ME49 4
Toxoplasma_gondii_GT1 3
Babesia_bovis_T2Bo_ 6
Theileria_parva__ 3
Theileria_annulata 3
Plasmodium_falciparum_3D7_ 4
Plasmodium_vivax_SaI-1_7.0 2
Plasmodium_knowlesi_strain_H_ 3
Plasmodium_yoelii_ssp._yoelii_1_ 3
Plasmodium_chabaudi_ 3
Plasmodium_berghei_ANKA_ 3
Symbiodinium_minutum_clade_B1_v1.2 6
Naegleria_gruberi_ 2
Trichomonas_vaginalis_ 12
Guillardia_theta_CCMP2712_v1.0_ 1
Emiliania_huxleyi_CCMP1516_ 6
Pseudanabaena_sp._PCC_7367 0
Acaryochloris_marina_MBIC11017 0
Synechocystis_sp._PCC_6803 0
Thermosynechococcus_sp._NK55 0
Thermosynechococcus_elongatus_BP-1 0
Synechococcus_sp._PCC_7502 0
Synechococcus_sp._PCC_6312 0
Microcoleus_sp._PCC_7113 0
Trichodesmium_erythraeum_IMS101 0
Geitlerinema_sp._PCC_7407 0
Cyanothece_sp._PCC_8802 0
Gloeocapsa_sp._PCC_7428 0
cyanobacterium_UCYN-A 0
Rivularia_sp._PCC_7116 0
Calothrix_sp._PCC_7507 0
Anabaena_variabilis_ATCC_29413 0
'Nostoc_azollae'_0708 0
Nostoc_sp._PCC_7107 0
Nostoc_punctiforme_PCC_73102 0
Nostoc_sp._PCC_7120 0
Nostoc_sp._PCC_7524 0
Anabaena_sp._90 0
Saccharomonospora_viridis_DSM_43017 0
Saccharopolyspora_erythraea_NRRL_2338 0
Amycolatopsis_mediterranei_U32 0
Micromonospora_sp._L5 0
Micromonospora_aurantiaca_ATCC_27029 0
Rhodococcus_jostii_RHA1 0
Rhodococcus_equi_103S 0
Rhodococcus_opacus_B4 0
Rhodococcus_erythropolis_PR4 0
Amycolicicoccus_subflavus_DQS3-9A1 0
Mycobacterium_sp._JLS 0
Mycobacterium_vanbaalenii_PYR-1 0
Mycobacterium_rhodesiae_NBB3 0
Mycobacterium_gilvum_PYR-GCK 0
Mycobacterium_chubuense_NBB4 0
Mycobacterium_smegmatis_str._MC2_155 0
Sanguibacter_keddieii_DSM_10542 0
Kytococcus_sedentarius_DSM_20547 0
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 0
Rothia_mucilaginosa_DY-18 0
Roseiflexus_sp._RS-1 0
Roseiflexus_castenholzii_DSM_13941 0
Desulfitobacterium_hafniense_Y51 0
Desulfitobacterium_dehalogenans_ATCC_51507 0
Desulfotomaculum_ruminis_DSM_2154 0
Heliobacterium_modesticaldum_Ice1 0
Moorella_thermoacetica_ATCC_39073 0
Carnobacterium_sp._17-4 0
Enterococcus_hirae_ATCC_9790 0
Enterococcus_faecium_Aus0004 0
Lactobacillus_rhamnosus_Lc_705 0
Lactobacillus_fermentum_IFO_3956 0
Lactobacillus_sakei_subsp._sakei_23K 0
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 0
Phycisphaera_mikurensis_NBRC_102666 0
Rhodopirellula_baltica_SH_1 0
Sphaerochaeta_coccoides_DSM_17374 0
Treponema_brennaborense_DSM_12168 0
Haliangium_ochraceum_DSM_14365 0
Hirschia_baltica_ATCC_49814 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   17
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   7
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   7
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   3
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   3
Cryptococcus_neoformans_var._grubii_H99_ 4
Cryptococcus_neoformans_B-3501A_ 3
Cryptococcus_neoformans_JEC21_ 2
Paracoccidioides_brasiliensis_Pb01_ 3
Paracoccidioides_brasiliensis_Pb03_ 1
Coccidioides_posadasii_str._Silveira_ 3
Coccidioides_immitis_RMSCC_3703_ 2
Coccidioides_immitis_RMSCC_2394_ 3
Coccidioides_immitis_H538.4_ 3
Ajellomyces_dermatitidis_ER-3_ 3
Histoplasma_capsulatum_H143 2
Histoplasma_capsulatum_H88 3
Histoplasma_capsulatum_G186AR 3
Aspergillus_fumigatus_A1163_ 3
Candida_albicans_WO-1_ 3
Saccharomyces_cerevisiae_UC5 4
Saccharomyces_cerevisiae_PW5 4
Saccharomyces_cerevisiae_FL100 2
Saccharomyces_cerevisiae_CLIB324 3
Saccharomyces_cerevisiae_CBS7960 3
Saccharomyces_cerevisiae_YJM269 2
Saccharomyces_cerevisiae_T7 4
Saccharomyces_cerevisiae_FostersB 4
Saccharomyces_cerevisiae_FostersO 3
Saccharomyces_cerevisiae_VL3 3
Saccharomyces_cerevisiae_Vin13 3
Saccharomyces_cerevisiae_LalvinQA23 2
Saccharomyces_cerevisiae_AWRI796 4
Saccharomyces_cerevisiae_Sigma1278b 4
Saccharomyces_cerevisiae_W303 4
Saccharomyces_cerevisiae_JAY291 4
Saccharomyces_cerevisiae_AWRI1631 4
Saccharomyces_cerevisiae_YPS163 2
Saccharomyces_cerevisiae_M22 3
Saccharomyces_cerevisiae_T73 1
Saccharomyces_cerevisiae_CLIB215 3
Saccharomyces_cerevisiae_Y10 1
Saccharomyces_cerevisiae_YJM789_ 4
Saccharomyces_cerevisiae_YJM789 4
Saccharomyces_cerevisiae_RM11-1a 3
Saccharomyces_cerevisiae_RM11-1a_ 3
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   4
Schizosaccharomyces_pombe_972h-_ 3
Batrachochytrium_dendrobatidis_JEL423_ 3
Batrachochytrium_dendrobatidis_JAM81_ 2
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   8
Hordeum_vulgare_22   (Domesticated barley)   17
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   8
Trypanosoma_brucei_Lister_427_v4.1 4
Neospora_caninum_Nc-Liverpool_6.2 1
Plasmodium_falciparum_HB3_ 3
Plasmodium_falciparum_Dd2_ 1
Chroococcidiopsis_thermalis_PCC_7203 0
Synechocystis_sp._PCC_6803_substr._PCC-P 0
Synechocystis_sp._PCC_6803_substr._PCC-N 0
Synechocystis_sp._PCC_6803_substr._GT-I 0
Synechocystis_sp._PCC_6803 0
Synechococcus_sp._JA-2-3B'a(2-13) 0
Synechococcus_sp._JA-3-3Ab 0
Crinalium_epipsammum_PCC_9333 0
Oscillatoria_nigro-viridis_PCC_7112 0
Oscillatoria_acuminata_PCC_6304 0
Arthrospira_platensis_NIES-39 0
Cyanothece_sp._PCC_7822 0
Cyanothece_sp._PCC_7425 0
Cyanothece_sp._PCC_7424 0
Cyanothece_sp._ATCC_51142 0
Cyanothece_sp._PCC_8801 0
Cyanobacterium_aponinum_PCC_10605 0
Cyanobacterium_stanieri_PCC_7202 0
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 0
Stanieria_cyanosphaera_PCC_7437 0
Calothrix_parietina_Calothrix_sp._PCC_6303 0
Cylindrospermum_stagnale_PCC_7417 0
Anabaena_cylindrica_PCC_7122 0
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Rhodococcus_pyridinivorans_SB3094 0
Rhodococcus_erythropolis_CCM2595 0
Mycobacterium_sp._KMS 0
Mycobacterium_sp._MCS 0
Mycobacterium_gilvum_Spyr1 0
Mycobacterium_smegmatis_str._MC2_155 0
Clavibacter_michiganensis_subsp._sepedonicus 0
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 0
Desulfitobacterium_dichloroeliminans_LMG_P-21439 0
Desulfitobacterium_hafniense_DCB-2 0
Enterococcus_faecium_Aus0085 0
Enterococcus_faecium_NRRL_B-2354 0
Enterococcus_faecium_DO 0
Lactobacillus_rhamnosus_LOCK908 0
Lactobacillus_rhamnosus_LOCK900 0
Lactobacillus_rhamnosus_ATCC_8530 0
Lactobacillus_rhamnosus_GG 0
Lactobacillus_rhamnosus_GG 0
Lactobacillus_fermentum_F-6 0
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 0
Desulfovibrio_vulgaris_str._'Miyazaki_F' 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   7
Pan_troglodytes_69_2.1.4   (Chimpanzee)   6
Gorilla_gorilla_69_3.1   (Western gorilla)   8
Pongo_abelii_69_2   (Sumatran orangutan)   6
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   7
Macaca_mulatta_69_1   (Rhesus monkey)   6
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   10
Otolemur_garnettii_69_3   (Small-eared galago)   7
Microcebus_murinus_69_1   (Gray mouse lemur)   6
Rattus_norvegicus_69_3.4   (Norway rat)   5
Mus_musculus_69_38   (House mouse)   7
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   7
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   6
Cavia_porcellus_69_3   (Domestic guinea pig)   7
Oryctolagus_cuniculus_69_2   (Rabbit)   9
Ochotona_princeps_69   (American pika)   5
Tupaia_belangeri_69   (Northern tree shrew)   7
Sus_scrofa_69_10.2   (Pig)   6
Bos_taurus_69_3.1   (Cattle)   7
Vicugna_pacos_69_1   (Alpaca)   5
Tursiops_truncatus_69_1   (Bottlenose dolphin)   7
Mustela_putorius_furo_69_1.0   (Domestic ferret)   7
Ailuropoda_melanoleuca_69_1   (Giant panda)   7
Canis_familiaris_69_3.1   (Dog)   4
Felis_catus_69   (Domestic cat)   5
Equus_caballus_69_2   (Horse)   6
Myotis_lucifugus_69_2.0   (Little brown bat)   7
Pteropus_vampyrus_69_1   (Large flying fox)   8
Sorex_araneus_69_1   (European shrew)   5
Erinaceus_europaeus_69   (Western European hedgehog)   6
Procavia_capensis_69_1   (Cape rock hyrax)   6
Loxodonta_africana_69_3   (African savanna elephant)   8
Echinops_telfairi_69   (Small Madagascar hedgehog)   6
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   7
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   5
Macropus_eugenii_69_1.0   (Tammar wallaby)   4
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   6
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   6
Ornithorhynchus_anatinus_69_5   (Platypus)   5
Petromyzon_marinus_69_7.0   (Sea lamprey)   3
Meleagris_gallopavo_69_2   (Turkey)   6
Gallus_gallus_69_2   (Chicken)   6
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   6
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   5
Anolis_carolinensis_69_2.0   (Green anole)   6
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   7
Latimeria_chalumnae_69_1   (Coelacanth)   7
Gadus_morhua_69_1   (Atlantic cod)   9
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   7
Takifugu_rubripes_69_4   (Torafugu)   8
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   8
Oryzias_latipes_69_1   (Japanese medaka)   7
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   9
Oreochromis_niloticus_69_1.0   (Nile tilapia)   9
Danio_rerio_69_9   (Zebrafish)   6
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   2
Ciona_intestinalis_69   (Vase tunicate)   4
Drosophila_melanogaster_69_5   (Fruit fly)   4
Caenorhabditis_elegans_69_215   (Roundworm)   3
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   4
Arabidopsis_thaliana_10   (Thale cress)   10

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   27
Homo_sapiens__(NCBI_version)   (Human)   16
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   7
Heliconius_numata__(Incomplete) 1
Loa_loa_v3.3_(Request)   (Eye worm)   3
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   3
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   3
Encephalitozoon_intestinalis__(endoparasite) 2
Encephalitozoon_cuniculi_(endoparasite) 2
Lotus_japonicus__(Early_assembly) 5
Malus_x_domestica_(Duplicate)   (Apple)   12
Ricinus_communis__(Early_assembly)   (Castor bean)   7
Nicotiana_benthamiana_0.4.4_(Early_draft) 16
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   12
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   12
Phoenix_dactylifera__(Early_draft)   (Date palm)   6
Protozoadb_2010_08_(Protozoadb) 142
STRING_v9.0.5_(STRING) 525
Uniprot_2018_03_genome 22086
NCBI_2017_08_genome 7823
TargetDB__(Targets) 19

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