SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 58006,_gap_,57196,57196,57196,103647,103647,103647,49899 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

58006 - Assembly domain of cartilage oligomeric matrix protein
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
103647 - TSP type-3 repeat
103647 - TSP type-3 repeat
103647 - TSP type-3 repeat
49899 - Concanavalin A-like lectins/glucanases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Meleagris_gallopavo_76_2   (Turkey)   1
Gallus_gallus_76_4   (Chicken)   1

Longest transcript per gene
Genome     Number
Meleagris_gallopavo_69_2   (Turkey)   1
Gallus_gallus_69_2   (Chicken)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 78
NCBI_2017_08_genome 18

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