SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 58046 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

58046 - Fibritin

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Papio_anubis_76   (Olive baboon)   0
Macaca_mulatta_76_1   (Rhesus monkey)   0
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Rattus_norvegicus_76_5.0   (Norway rat)   0
Equus_caballus_76_2   (Horse)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Saccoglossus_kowalevskii_v3.0 0
Meleagris_gallopavo_76_2   (Turkey)   0
Gallus_gallus_76_4   (Chicken)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0
Gadus_morhua_76_1   (Atlantic cod)   0
Takifugu_rubripes_76_4   (Torafugu)   0
Danio_rerio_76_9   (Zebrafish)   0
Oikopleura_dioica 0
Ciona_intestinalis_76   (Vase tunicate)   0
Helobdella_robusta_ 0
Capitella_sp._I_ 0
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   0
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   0
Atta_cephalotes_v1.1 0
Camponotus_floridanus_v3.3   (Florida carpenter ant)   0
Drosophila_pseudoobscura_2.13 0
Drosophila_suzukii 0
Drosophila_ananassae_1.3 0
Drosophila_virilis_1.2 0
Drosophila_mojavensis_1.3 0
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   0
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   0
Tribolium_castaneum_3.0   (Red flour beetle)   0
Rhodnius_prolixus_22 0
Strigamia_maritima_22 0
Tetranychus_urticae_   (Two-spotted spider mite)   0
Meloidogyne_hapla_ 0
Onchocerca_volvulus_22 0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   0
Caenorhabditis_japonica_ 0
Nematostella_vectensis_1.0   (Starlet sea anemone)   0
Hydra_vulgaris 0
Trichoplax_adhaerens_ 0
Monosiga_brevicollis_ 0
Sphaeroforma_arctica_JP610_ 0
Sporisorium_reilianum_22 0
Ustilago_maydis_ 0
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 0
Sphaerobolus_stellatus_v1.0 0
Hydnomerulius_pinastri_v2.0 0
Scleroderma_citrinum_Foug_A_v1.0 0
Punctularia_strigosozonata_v1.0 0
Sebacina_vermifera_MAFF_305830_v1.0 0
Wolfiporia_cocos_MD-104_SS10__v1.0 0
Tremella_mesenterica_   (Witches' butter)   0
Magnaporthe_poae_ATCC_64411_22 0
Sporotrichum_thermophile_ATCC_42464_ 0
Chaetomium_globosum_CBS_148.51_ 0
Fusarium_graminearum_ 0
Botrytis_cinerea_B05.10_ 0
Aspergillus_nidulans_FGSC_A4_ 0
Aspergillus_sydowii_v1.0 0
Aspergillus_versicolor_v1.0 0
Aspergillus_glaucus 0
Aspergillus_carbonarius_ITEM_5010_ 0
Aspergillus_niger_22 0
Pichia_membranifaciensv1.0 0
Candida_parapsilosis_ 0
Lodderomyces_elongisporus_NRRL_YB-4239_ 0
Candida_glabrata_CBS138 0
Kluyveromyces_lactis 0
Dictyostelium_purpureum_ 0
Entamoeba_histolytica_1 0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Thellungiella_halophila_v173 0
Capsella_rubella_v183 0
Arabidopsis_lyrata_   (Lyrate rockcress)   0
Arabidopsis_thaliana_10   (Thale cress)   0
Medicago_truncatula_   (Barrel medic)   0
Phaseolus_vulgaris_v186   (French bean)   0
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   0
Manihot_esculenta_v147   (Cassava)   0
Populus_trichocarpa_v156   (Black cottonwood)   0
Mimulus_guttatus_v140   (Spotted monkey flower)   0
Solanum_lycopersicum_v.2.3   (Tomato)   0
Triticum_urartu_22 0
Triticum_aestivum_22   (Bread wheat)   0
Aegilops_tauschii_22 0
Oryza_punctata_22 0
Oryza_brachyantha_22   (Malo sina)   0
Panicum_virgatum_v202   (Switchgrass)   0
Zea_mays_subsp._mays_   (Maize)   0
Zea_mays_v181   (Maize)   0
Musa_acuminata_22   (Wild Malaysian banana)   0
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Chlorella_variabilis_sp._NC64A_ 0
Chlorella_vulgaris_ 0
Volvox_carteri_f._nagariensis_ 0
Volvox_carteri_v199 0
Ostreococcus_tauri_ 0
Micromonas_sp._RCC299_ 0
Bigelowiella_natans_CCMP2755_22 0
Trypanosoma_congolense_2.4 0
Trypanosoma_brucei_gambiense_v4.1 0
Ectocarpus_siliculosus 0
Pythium_arrhenomanes_ATCC_12531_22 0
Pythium_irregulare_DAOM_BR486_22 0
Phytophthora_sojae_1.1 0
Phytophthora_infestans_T30-4_ 0
Perkinsus_marinus_ATCC_50983_ 0
Plasmodium_vivax_SaI-1_7.0 0
Plasmodium_knowlesi_strain_H_ 0
Plasmodium_chabaudi_ 0
Symbiodinium_minutum_clade_B1_v1.2 0
Trichomonas_vaginalis_ 0
Leptolyngbya_sp._PCC_7376 0
Mycoplasma_penetrans_HF-2 0
Stackebrandtia_nassauensis_DSM_44728 0
Clostridium_cellulolyticum_H10 0
Thermincola_potens_JR 0
Pelotomaculum_thermopropionicum_SI 0
Desulfotomaculum_acetoxidans_DSM_771 0
Desulfotomaculum_ruminis_DSM_2154 0
Clostridium_lentocellum_DSM_5427 0
[Ruminococcus]_torques 0
Eubacterium_rectale_M104/1 0
Eubacterium_rectale_ATCC_33656 0
Alkaliphilus_metalliredigens_QYMF 0
Clostridium_beijerinckii_NCIMB_8052 0
Clostridium_cellulovorans_743B 0
Bacillus_selenitireducens_MLS10 0
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 0
Macrococcus_caseolyticus_JCSC5402 0
Staphylococcus_epidermidis_RP62A 0
Marivirga_tractuosa_DSM_4126 0
Alistipes_finegoldii_DSM_17242 0
Bacteroides_thetaiotaomicron_VPI-5482 0
Zunongwangia_profunda_SM-A87 0
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 0
Coraliomargarita_akajimensis_DSM_45221 0
Brachyspira_pilosicoli_95/1000 0
Kosmotoga_olearia_TBF_19.5.1 0
Caldisericum_exile_AZM16c01 0
Sebaldella_termitidis_ATCC_33386 0
Geobacter_sp._M21 0
Geobacter_bemidjiensis_Bem 0
Neisseria_meningitidis_alpha14 0
Cupriavidus_metallidurans_CH34 0
Verminephrobacter_eiseniae_EF01-2 0
Pusillimonas_sp._T7-7 0
Methylovorus_sp._MP688 0
Methylovorus_glucosetrophus_SIP3-4 0
Ruegeria_sp._TM1040 0
Rickettsia_felis_URRWXCal2 0
Teredinibacter_turnerae_T7901 0
Vibrio_harveyi_ATCC_BAA-1116 0
Vibrio_parahaemolyticus_RIMD_2210633 0
Pseudoalteromonas_sp._SM9913 0
Glaciecola_nitratireducens_FR1064 0
Legionella_longbeachae_NSW150 0
Francisella_sp._TX077308 0
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 0
Haloterrigena_turkmenica_DSM_5511 0
Haloquadratum_walsbyi_DSM_16790 0
Haloferax_volcanii_DS2 0
Halomicrobium_mukohataei_DSM_12286 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0
Coccidioides_immitis_RMSCC_3703_ 0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0
Trypanosoma_brucei_Lister_427_v4.1 0
Plasmodium_falciparum_HB3_ 0
Crinalium_epipsammum_PCC_9333 0
Oscillatoria_nigro-viridis_PCC_7112 0
Oscillatoria_acuminata_PCC_6304 0
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 0
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 0
Candidatus_Phytoplasma_solani_tobfin_28409 0
Corynebacterium_callunae_DSM_20147 0
Clostridium_saccharobutylicum_DSM_13864 0
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 0
Halobacteroides_halobius_DSM_5150 0
Enterococcus_mundtii_QU_25 0
Enterococcus_casseliflavus_EC20 0
Enterococcus_faecium_NRRL_B-2354 0
Streptococcus_mutans_GS-5 0
Streptococcus_mutans_LJ23 0
Bacillus_thuringiensis_HD-789 0
Bacillus_thuringiensis_YBT-1518 0
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 0
Staphylococcus_warneri_SG1 0
Staphylococcus_epidermidis_ATCC_12228 0
Emticicia_oligotrophica_DSM_17448 0
Prevotella_sp._oral_taxon_299_str._F0039 0
Alistipes_shahii_WAL_8301 0
Nonlabens_dokdonensis_DSW-6 0
Riemerella_anatipestifer_RA-CH-2 0
Riemerella_anatipestifer_RA-CH-1 0
Riemerella_anatipestifer_RA-GD 0
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 0
Helicobacter_pylori_UM066 0
Desulfocapsa_sulfexigens_DSM_10523 0
Desulfobacula_toluolica_Tol2 0
Orientia_tsutsugamushi_str._Ikeda 0
Sinorhizobium_meliloti_SM11 0
Bradyrhizobium_japonicum_USDA_6 0
Mannheimia_haemolytica_USMARC_2286 0
Mannheimia_haemolytica_M42548 0
Mannheimia_haemolytica_D174 0
Mannheimia_haemolytica_D171 0
Mannheimia_haemolytica_D153 0
Mannheimia_haemolytica_USDA-ARS-USMARC-183 0
Mannheimia_haemolytica_USDA-ARS-USMARC-185 0
Vibrio_parahaemolyticus_BB22OP 0
Shewanella_putrefaciens_200 0
Stenotrophomonas_maltophilia_R551-3 0
Xanthomonas_oryzae_pv._oryzicola_BLS256 0
Salmonella_bongori_N268-08 0
Escherichia_coli_O127:H6_str._E2348/69 0
Pseudomonas_aeruginosa_SCV20265 0
Pseudomonas_aeruginosa_LES431 0
Pseudomonas_aeruginosa_LESB58 0
Methanolobus_psychrophilus_R15 0
Haloquadratum_walsbyi_C23 0
Halorhabdus_tiamatea_SARL4B 0

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Longest transcript per gene
Genome     Number
Macaca_mulatta_69_1   (Rhesus monkey)   0
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Equus_caballus_69_2   (Horse)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Gallus_gallus_69_2   (Chicken)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   0
Gadus_morhua_69_1   (Atlantic cod)   0
Takifugu_rubripes_69_4   (Torafugu)   0
Ciona_intestinalis_69   (Vase tunicate)   0
Arabidopsis_thaliana_10   (Thale cress)   0

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Loa_loa_v3.3_(Request)   (Eye worm)   0
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   0
Lotus_japonicus__(Early_assembly) 0
Malus_x_domestica_(Duplicate)   (Apple)   0
Ricinus_communis__(Early_assembly)   (Castor bean)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   0
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   0
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 0
NCBI_plasmid_sequences_(Plasmids) 0
TargetDB__(Targets) 0
STRING_v9.0.5_(STRING) 0
PDB_chains_(SCOP_1.75)_(PDB) 5
UniProt__viral_sequences_(Viral) 0
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 65
Protozoadb_2010_08_(Protozoadb) 0
NCBI_viral_sequences_(Viral) 0
Protein_Data_Bank_(all_PDB_sequenc) 30
Uniprot_2018_03_genome 9
NCBI_2017_08_genome 7

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