SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 63825,57196,_gap_,57424,57424 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

63825 - YWTD domain
57196 - EGF/Laminin
57424 - LDL receptor-like module
57424 - LDL receptor-like module

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Astyanax_mexicanus_76   (Mexican tetra)   0
Atta_cephalotes_v1.1 0
Megaselia_scalaris_22 1

Longest transcript per gene
Genome     Number
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0

Others
Genome     Number
NCBI_2017_08_genome 0
Uniprot_2018_03_genome 14

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