SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 64356 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

64356 - SNARE-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   101
Pan_troglodytes_76_2.1.4   (Chimpanzee)   15
Gorilla_gorilla_76_3.1   (Western gorilla)   12
Pongo_abelii_76_2   (Sumatran orangutan)   12
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   10
Papio_anubis_76   (Olive baboon)   11
Macaca_mulatta_76_1   (Rhesus monkey)   18
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   18
Otolemur_garnettii_76_3   (Small-eared galago)   14
Microcebus_murinus_76_1   (Gray mouse lemur)   10
Rattus_norvegicus_76_5.0   (Norway rat)   12
Mus_musculus_76_38   (House mouse)   30
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   9
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   11
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   18
Cavia_porcellus_76_3   (Domestic guinea pig)   12
Oryctolagus_cuniculus_76_2   (Rabbit)   6
Ochotona_princeps_76   (American pika)   8
Tupaia_belangeri_76   (Northern tree shrew)   9
Sus_scrofa_76_10.2   (Pig)   14
Bos_taurus_76_3.1   (Cattle)   11
Ovis_aries_76_3.1   (Sheep)   11
Vicugna_pacos_76_1   (Alpaca)   5
Tursiops_truncatus_76_1   (Bottlenose dolphin)   8
Mustela_putorius_furo_76_1.0   (Domestic ferret)   10
Ailuropoda_melanoleuca_76_1   (Giant panda)   8
Canis_familiaris_76_3.1   (Dog)   9
Felis_catus_76_6.2   (Domestic cat)   10
Equus_caballus_76_2   (Horse)   10
Myotis_lucifugus_76_2.0   (Little brown bat)   11
Pteropus_vampyrus_76_1   (Large flying fox)   9
Sorex_araneus_76_1   (European shrew)   8
Erinaceus_europaeus_76   (Western European hedgehog)   10
Procavia_capensis_76_1   (Cape rock hyrax)   9
Loxodonta_africana_76_3   (African savanna elephant)   11
Echinops_telfairi_76   (Small Madagascar hedgehog)   7
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   7
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   6
Macropus_eugenii_76_1.0   (Tammar wallaby)   8
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   9
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   5
Ornithorhynchus_anatinus_76_5   (Platypus)   11
Saccoglossus_kowalevskii_v3.0 9
Petromyzon_marinus_76_7.0   (Sea lamprey)   4
Meleagris_gallopavo_76_2   (Turkey)   10
Gallus_gallus_76_4   (Chicken)   6
Anas_platyrhynchos_76_1.0   (Mallard)   7
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   8
Ficedula_albicollis_76_1.0   (Collared flycatcher)   5
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   10
Anolis_carolinensis_76_2.0   (Green anole)   9
Xenopus_laevis_   (African clawed frog)   24
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   14
Latimeria_chalumnae_76_1   (Coelacanth)   14
Lepisosteus_oculatus_76   (Spotted gar)   10
Gadus_morhua_76_1   (Atlantic cod)   12
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   11
Takifugu_rubripes_76_4   (Torafugu)   20
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   19
Oryzias_latipes_76_1   (Japanese medaka)   14
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   12
Poecilia_formosa_76   (Amazon molly)   11
Oreochromis_niloticus_76_1.0   (Nile tilapia)   12
Astyanax_mexicanus_76   (Mexican tetra)   11
Danio_rerio_76_9   (Zebrafish)   25
Oikopleura_dioica 10
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   5
Ciona_intestinalis_76   (Vase tunicate)   6
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   5
Adineta_vaga 26
Octopus_bimaculoides_280 11
Crassostrea_gigas_22   (Pacific oyster)   7
Lottia_gigantea_   (Owl limpet)   5
Helobdella_robusta_ 10
Capitella_sp._I_ 9
Danaus_plexippus_OGS1.0   (Monarch butterfly)   6
Heliconius_melpomene_   (Postman butterfly)   5
Bombyx_mori_   (Domestic silkworm)   6
Nasonia_vitripennis_   (Jewel wasp)   5
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   18
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   6
Linepithema_humile_v1.1   (Argentine ant)   6
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   6
Solenopsis_invicta_v.2.2.3   (Red fire ant)   5
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   6
Atta_cephalotes_v1.1 8
Camponotus_floridanus_v3.3   (Florida carpenter ant)   6
Lucilia_cuprina   (Australian sheep blowfly)   6
Drosophila_grimshawi_1.3 7
Drosophila_willistoni_1.3 6
Drosophila_pseudoobscura_2.13 6
Drosophila_persimilis_1.3 6
Drosophila_suzukii 2
Drosophila_yakuba_1.3 7
Drosophila_simulans_1.3 5
Drosophila_sechellia_1.3 6
Drosophila_melanogaster_76_5   (Fruit fly)   10
Drosophila_erecta_1.3 6
Drosophila_ananassae_1.3 6
Drosophila_virilis_1.2 6
Drosophila_mojavensis_1.3 6
Megaselia_scalaris_22 3
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   17
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   6
Anopheles_darlingi_22   (American malaria mosquito)   3
Anopheles_gambiae_49_3j   (African malaria mosquito)   6
Tribolium_castaneum_3.0   (Red flour beetle)   6
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   6
Acyrthosiphon_pisum_   (Pea aphid)   8
Rhodnius_prolixus_22 7
Daphnia_pulex_   (Common water flea)   6
Strigamia_maritima_22 4
Sarcoptes_scabiei 5
Tetranychus_urticae_   (Two-spotted spider mite)   7
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   9
Pristionchus_pacificus_ 9
Meloidogyne_incognita_   (Southern root-knot nematode)   11
Meloidogyne_hapla_ 5
Onchocerca_volvulus_22 6
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   8
Caenorhabditis_japonica_ 8
Caenorhabditis_brenneri_ 9
Caenorhabditis_remanei_ 6
Caenorhabditis_elegans_76_235   (Roundworm)   6
Caenorhabditis_briggsae_2 5
Trichinella_spiralis_22 2
Hymenolepis_microstoma_ 6
Echinococcus_multilocularis_ 8
Echinococcus_granulosus_ 9
Taenia_solium_   (Pork tapeworm)   6
Schistosoma_mansoni_ 6
Mnemiopsis_leidyi   (Sea walnut)   8
Thelohanellus_kitauei 5
Acropora_digitifera_v1.0 7
Nematostella_vectensis_1.0   (Starlet sea anemone)   7
Hydra_vulgaris 7
Amphimedon_queenslandica 13
Trichoplax_adhaerens_ 7
Proterospongia_sp._ATCC_50818_ 8
Monosiga_brevicollis_ 5
Sphaeroforma_arctica_JP610_ 9
Capsaspora_owczarzaki_ATCC_30864_ 7
Conidiobolus_coronatus_NRRL28638_v1.0 7
Mortierella_verticillata_NRRL_6337_ 7
Phycomyces_blakesleeanus_ 8
Rhizopus_oryzae_RA_99-880_ 3
Mucor_circinelloides_ 8
Rhizomucor_miehei_CAU432_ 5
Malassezia_globosa_CBS_7966_ 10
Sporisorium_reilianum_22 3
Ustilago_maydis_ 1
Mixia_osmundae_IAM_14324_v1.0 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 5
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 4
Melampsora_laricis-populina_ 5
Rhodotorula_graminis_WP1_v1.0 6
Sporobolomyces_roseus_IAM_13481_ 9
Microbotryum_violaceum_22 5
Wallemia_sebi_v1.0 6
Sphaerobolus_stellatus_v1.0 6
Piloderma_croceum_F_1598_v1.0 5
Serpula_lacrymans_var._lacrymans_S7.9_ 4
Coniophora_puteana 3
Hydnomerulius_pinastri_v2.0 5
Paxillus_rubicundulus_Ve08.2h10_v1.0 5
Pisolithus_microcarpus_441_v1.0 5
Pisolithus_tinctorius_Marx_270_v1.0 5
Scleroderma_citrinum_Foug_A_v1.0 6
Coprinopsis_cinerea_okayama7_130_v3 7
Pleurotus_ostreatus_   (Oyster mushroom)   6
Amanita_thiersii_Skay4041_v1.0 5
Amanita_muscaria_Koide_v1.0   (Fly agaric)   6
Galerina_marginata_v1.0 6
Hebeloma_cylindrosporum_h7_v2.0 6
Laccaria_bicolor_S238N-H82_ 7
Agaricus_bisporus_var._bisporus_ 5
Schizophyllum_commune_ 13
Stereum_hirsutum_FP-91666_SS1__v1.0 5
Heterobasidion_annosum_ 8
Gloeophyllum_trabeumv1.0 6
Punctularia_strigosozonata_v1.0 5
Sebacina_vermifera_MAFF_305830_v1.0 5
Fomitiporia_mediterranea_v1.0 5
Tulasnella_calospora_AL13/4D_v1.0 5
Postia_placenta_ 8
Wolfiporia_cocos_MD-104_SS10__v1.0 4
Fomitopsis_pinicolav1.0 5
Fomitopsis_pinicola_FP-58527_SS1_v3.0 5
Phanerochaete_chrysosporium_RP-78_2.1 6
Dichomitus_squalens 5
Trametes_versicolor_v1.0 5
Tremella_mesenterica_   (Witches' butter)   3
Daldinia_eschscholzii_EC12_v1.0 5
Apiospora_montagnei_NRRL_25634_v1.0 5
Magnaporthe_poae_ATCC_64411_22 2
Magnaporthe_grisea_70-15_ 6
Podospora_anserina_ 5
Sporotrichum_thermophile_ATCC_42464_ 6
Thielavia_terrestris_NRRL_8126_ 3
Chaetomium_globosum_CBS_148.51_ 5
Neurospora_tetrasperma_ 4
Neurospora_discreta_FGSC_8579_ 3
Neurospora_crassa_OR74A_ 3
Cryphonectria_parasitica_   (Chestnut blight fungus)   6
Verticillium_albo-atrum_VaMs.102_ 5
Verticillium_dahliae_VdLs.17_ 5
Acremonium_alcalophilumv_1.0 6
Glomerella_graminicola_22 6
Fusarium_graminearum_ 6
Nectria_haematococca_mpVI_ 6
Fusarium_oxysporum_f._sp._lycopersici_4286_ 6
Fusarium_verticillioides_7600_ 4
Trichoderma_asperellum_CBS_433.97_v1.0 6
Trichoderma_atroviride_ 6
Trichoderma_citrinoviride_v1.0 4
Trichoderma_reesei_1.2 7
Trichoderma_virens_Gv29-8_ 6
Trichoderma_longibrachiatum_ATCC_18648_v1.0 7
Trichoderma_harzianum_CBS_226.95_v1.0 6
Amorphotheca_resinae_v1.0   (Creosote fungus)   7
Botrytis_cinerea_B05.10_ 6
Sclerotinia_sclerotiorum_ 5
Blumeria_graminis_22 6
Didymella_exigua_CBS_183.55_v1.0 5
Leptosphaeria_maculans_22 3
Setosphaeria_turcica_v1.0 2
Cochliobolus_miyabeanus_ATCC_44560_v1.0 3
Cochliobolus_victoriae_FI3_v1.0 3
Cochliobolus_carbonum_26-R-13_v1.0 3
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   3
Alternaria_brassicicola_ 2
Cochliobolus_lunatus_m118_v2.0 3
Pyrenophora_teres_f._teres_22 2
Pyrenophora_tritici-repentis_ 4
Stagonospora_nodorum_ 4
Mycosphaerella_graminicola_IPO323_ 7
Zasmidium_cellare_ATCC_36951_v1.0 7
Dothistroma_septosporum 8
Septoria_musiva_v1.0 8
Mycosphaerella_fijiensis_CIRAD86_ 5
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 4
Paracoccidioides_brasiliensis_Pb18_ 4
Coccidioides_posadasii_RMSCC_3488_ 8
Coccidioides_immitis_RS_ 7
Ajellomyces_dermatitidis_SLH14081_ 3
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 4
Microsporum_canis_CBS_113480_ 6
Trichophyton_equinum_CBS_127.97_ 4
Trichophyton_verrucosum_HKI_0517_ 1
Arthroderma_benhamiae_CBS_112371_ 3
Trichophyton_tonsurans_CBS_112818_ 5
Trichophyton_rubrum_CBS_118892_ 5
Uncinocarpus_reesii_1704_ 4
Aspergillus_zonatus_v1.0 4
Penicillium_chrysogenum_Wisconsin_54-1255_ 6
Penicillium_chrysogenum_v1.0 5
Aspergillus_acidus_v1.0 3
Aspergillus_fumigatus_Af293 5
Aspergillus_brasiliensis_v1.0 4
Aspergillus_nidulans_FGSC_A4_ 6
Aspergillus_sydowii_v1.0 5
Aspergillus_versicolor_v1.0 3
Aspergillus_glaucus 5
Aspergillus_carbonarius_ITEM_5010_ 5
Neosartorya_fischeri_NRRL_181_ 5
Aspergillus_terreus_NIH2624_ 5
Aspergillus_tubingensis_v1.0 3
Aspergillus_wentii_v1.0 5
Aspergillus_oryzae_RIB40_ 4
Aspergillus_niger_22 6
Aspergillus_niger_ATCC_1015_ 4
Aspergillus_flavus_NRRL3357_ 5
Aspergillus_clavatus_NRRL_1_ 3
Penicillium_marneffei_ATCC_18224_ 7
Tuber_melanosporum_Mel28_22 6
Tuber_melanosporum_Vittad_   (Perigord truffle)   6
Hansenula_polymorpha_v2.0 6
Dekkera_bruxellensis_CBS_2499_v2.0 6
Pichia_membranifaciensv1.0 4
Candida_tanzawaensis_NRRL_Y-17324__v1.0 8
Candida_dubliniensis_CD36_ 6
Candida_tropicalis_MYA-3404_ 6
Candida_parapsilosis_ 5
Candida_albicans_SC5314 6
Lodderomyces_elongisporus_NRRL_YB-4239_ 2
Babjeviella_inositovora_NRRL_Y-12698_v1.0 6
Pichia_stipitis_CBS_6054_ 7
Candida_guilliermondii_ATCC_6260_ 7
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 7
Debaromyces_hansenii 6
Wickerhamomyces_anomalus 6
Pichia_pastoris_GS115_ 8
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 5
Yarrowia_lipolytica_CLIB122 5
Candida_lusitaniae_ATCC_42720_ 5
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 7
Vanderwaltozyma_polyspora_DSM_70294_ 6
Candida_glabrata_CBS138 6
Kluyveromyces_thermotolerans_CBS_6340 6
Lachancea_kluyveri_ 6
Kluyveromyces_waltii 6
Ashbya_gossypii_ATCC_10895_ 7
Zygosaccharomyces_rouxii_ 5
Saccharomyces_mikatae_MIT 7
Saccharomyces_paradoxus_MIT 6
Saccharomyces_cerevisiae_76   (Baker's yeast)   6
Saccharomyces_bayanus_MIT 8
Kluyveromyces_lactis 6
Schizosaccharomyces_cryophilus_OY26_22 8
Schizosaccharomyces_octosporus_yFS286_ 8
Schizosaccharomyces_japonicus_yFS275_ 8
Schizosaccharomyces_pombe   (Fission yeast)   8
Catenaria_anguillulae_PL171_v1.0 8
Allomyces_macrogynus_ATCC_38327_ 14
Spizellomyces_punctatus_DAOM_BR117_ 6
Dictyostelium_discoideum 12
Dictyostelium_purpureum_ 11
Entamoeba_dispar_1.2 8
Entamoeba_invadens_1.2 9
Entamoeba_histolytica_1 8
Selaginella_moellendorffii_ 23
Pinus_taeda   (Loblolly pine)   10
Picea_abies   (Norway spruce)   3
Eucalyptus_grandis_v201   (Rose gum)   16
Theobroma_cacao_B97-61/B2_v1   (Cacao)   13
Gossypium_raimondii_v221 71
Citrus_clementina_v165 16
Citrus_sinensis_v154   (Sweet orange)   29
Thellungiella_halophila_v173 24
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   21
Capsella_rubella_v183 13
Arabidopsis_lyrata_   (Lyrate rockcress)   13
Arabidopsis_thaliana_10   (Thale cress)   15
Carica_papaya_   (Papaya)   11
Medicago_truncatula_   (Barrel medic)   22
Phaseolus_vulgaris_v186   (French bean)   20
Glycine_max_v109   (Soybean)   49
Cucumis_sativus_v122   (Cucumber)   17
Fragaria_vesca_   (Wild strawberry)   6
Malus_domestica_v196   (Apple)   19
Prunus_persica_v139   (Peach)   12
Linum_usitatissimum_v200   (Flax)   18
Manihot_esculenta_v147   (Cassava)   23
Populus_trichocarpa_v156   (Black cottonwood)   21
Vitis_vinifera_   (Wine grape)   18
Mimulus_guttatus_v140   (Spotted monkey flower)   18
Solanum_lycopersicum_v.2.3   (Tomato)   16
Solanum_tuberosum_   (Potato)   22
Actinidia_chinensis_Hongyang_ 10
Aquilegia_coerulea_v195 25
Triticum_urartu_22 9
Triticum_aestivum_22   (Bread wheat)   36
Aegilops_tauschii_22 6
Brachypodium_distachyon_   (Stiff brome)   22
Oryza_barthii_22   (African wild rice)   20
Oryza_meridionalis_22 20
Oryza_glumaepatula_22 12
Oryza_glaberrima   (African rice)   14
Oryza_punctata_22 9
Oryza_nivara_22 16
Oryza_brachyantha_22   (Malo sina)   11
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   26
Oryza_sativa_v193   (Rice)   24
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   13
Panicum_virgatum_v202   (Switchgrass)   32
Setaria_italica_v164   (Foxtail millet)   23
Zea_mays_subsp._mays_   (Maize)   50
Zea_mays_v181   (Maize)   51
Sorghum_bicolor_   (Sorghum)   12
Musa_balbisiana   (Balbis banana)   7
Musa_acuminata_22   (Wild Malaysian banana)   10
Amborella_trichopoda_22 11
Physcomitrella_patens 16
Coccomyxa_subellipsoidea_sp._C-169_v2 9
Asterochloris_sp._Cgr/DA1pho_v1.0 8
Chlorella_variabilis_sp._NC64A_ 7
Chlorella_vulgaris_ 8
Volvox_carteri_f._nagariensis_ 9
Volvox_carteri_v199 9
Chlamydomonas_reinhardtii_4.0 9
Ostreococcus_sp._RCC809_ 9
Ostreococcus_lucimarinus_CCE9901_ 8
Ostreococcus_tauri_ 9
Bathycoccus_prasinos_ 7
Micromonas_sp._RCC299_ 9
Micromonas_pusilla_CCMP1545_v3.0 8
Cyanidioschyzon_merolae_strain_10D_22 4
Cyanidioschyzon_merolae 4
Porphyridium_purpureum_02_2012 8
Thecamonas_trahens_ATCC_50062_ 9
Bigelowiella_natans_CCMP2755_22 8
Giardia_lamblia_2.3 5
Cyanophora_paradoxa_ 9
Leishmania_mexicana_2.4 6
Leishmania_major_strain_Friedlin_ 6
Leishmania_infantum_JPCM5_2.4 6
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 6
Trypanosoma_vivax_ 5
Trypanosoma_cruzi_strain_CL_Brener 4
Trypanosoma_congolense_2.4 4
Trypanosoma_brucei_gambiense_v4.1 4
Trypanosoma_brucei_TREU927_v4.1 6
Ectocarpus_siliculosus 10
Aureococcus_anophagefferens_ 7
Albugo_laibachii_22 7
Pythium_iwayamai_DAOM_BR242034_22 9
Pythium_arrhenomanes_ATCC_12531_22 10
Pythium_ultimum_v1.7-2 10
Pythium_aphanidermatum_DAOM_BR444_22 9
Pythium_irregulare_DAOM_BR486_22 10
Pythium_vexans_DAOM_BR484_22 10
Phytophthora_ramorum_1.1   (Sudden oak death agent)   9
Phytophthora_sojae_1.1 9
Phytophthora_infestans_T30-4_ 10
Phytophthora_capsici_ 8
Hyaloperonospora_arabidopsidis_22 11
Phaeodactylum_tricornutumCCAP_1055/1 9
Fragilariopsis_cylindrus 12
Thalassiosira_pseudonana_CCMP1335 7
Perkinsus_marinus_ATCC_50983_ 13
Paramecium_tetraurelia_ 15
Tetrahymena_thermophila_SB210_1_ 6
Ichthyophthirius_multifiliis_strain_G5_ 6
Cryptosporidium_hominis 2
Cryptosporidium_muris 7
Cryptosporidium_parvum_Iowa_II 6
Neospora_caninum 7
Toxoplasma_gondii_VEG 5
Toxoplasma_gondii_ME49 6
Toxoplasma_gondii_GT1 6
Babesia_bovis_T2Bo_ 12
Theileria_parva__ 6
Theileria_annulata 7
Plasmodium_falciparum_3D7_ 7
Plasmodium_vivax_SaI-1_7.0 7
Plasmodium_knowlesi_strain_H_ 7
Plasmodium_yoelii_ssp._yoelii_1_ 8
Plasmodium_chabaudi_ 7
Plasmodium_berghei_ANKA_ 7
Symbiodinium_minutum_clade_B1_v1.2 6
Naegleria_gruberi_ 8
Trichomonas_vaginalis_ 20
Guillardia_theta_CCMP2712_v1.0_ 8
Emiliania_huxleyi_CCMP1516_ 14
Pseudanabaena_sp._PCC_7367 0
Halothece_sp._PCC_7418 0
Nostoc_sp._PCC_7107 0
Mycoplasma_conjunctivae_HRC/581 0
Atopobium_parvulum_DSM_20469 0
Coriobacterium_glomerans_PW2 0
Tropheryma_whipplei_TW08/27 0
Syntrophobotulus_glycolicus_DSM_8271 0
Clostridium_phytofermentans_ISDg 0
Clostridium_novyi_NT 0
Clostridium_ljungdahlii_DSM_13528 0
Clostridium_kluyveri_DSM_555 0
Clostridium_cellulovorans_743B 0
Carboxydothermus_hydrogenoformans_Z-2901 0
Lactobacillus_crispatus_ST1 0
Lactobacillus_gasseri_ATCC_33323 0
Streptococcus_suis_P1/7 0
Bacillus_clausii_KSM-K16 0
Paludibacter_propionicigenes_WB4 0
Pedobacter_saltans_DSM_12145 0
Fluviicola_taffensis_DSM_16823 0
Cellulophaga_lytica_DSM_7489 0
Leptospira_interrogans_serovar_Lai_str._IPAV 0
Brachyspira_murdochii_DSM_12563 0
Borrelia_burgdorferi_B31 0
Treponema_denticola_ATCC_35405 0
Deferribacter_desulfuricans_SSM1 0
Sebaldella_termitidis_ATCC_33386 0
Lawsonia_intracellularis_PHE/MN1-00 0
Bartonella_tribocorum_CIP_105476 0
Haemophilus_parainfluenzae_T3T1 0
Vibrio_harveyi_ATCC_BAA-1116 0
Photobacterium_profundum_SS9 0
Colwellia_psychrerythraea_34H 0
Shigella_dysenteriae_Sd197 0
Pseudomonas_mendocina_ymp 0
Sulfolobus_tokodaii_str._7 0
Sulfolobus_islandicus_Y.N.15.51 0
Sulfolobus_solfataricus_P2 0
Methanosaeta_concilii_GP6 0
Thermoplasma_volcanium_GSS1 0
Methanosphaera_stadtmanae_DSM_3091 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   33
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   8
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   7
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   3
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   5
Cryptococcus_neoformans_var._grubii_H99_ 3
Cryptococcus_neoformans_B-3501A_ 4
Cryptococcus_neoformans_JEC21_ 3
Paracoccidioides_brasiliensis_Pb01_ 5
Paracoccidioides_brasiliensis_Pb03_ 5
Coccidioides_posadasii_str._Silveira_ 8
Coccidioides_immitis_RMSCC_3703_ 6
Coccidioides_immitis_RMSCC_2394_ 8
Coccidioides_immitis_H538.4_ 6
Ajellomyces_dermatitidis_ER-3_ 4
Histoplasma_capsulatum_H143 2
Histoplasma_capsulatum_H88 3
Histoplasma_capsulatum_G186AR 4
Aspergillus_fumigatus_A1163_ 5
Candida_albicans_WO-1_ 6
Saccharomyces_cerevisiae_UC5 6
Saccharomyces_cerevisiae_PW5 6
Saccharomyces_cerevisiae_FL100 4
Saccharomyces_cerevisiae_CLIB382 2
Saccharomyces_cerevisiae_CLIB324 4
Saccharomyces_cerevisiae_CBS7960 4
Saccharomyces_cerevisiae_YJM269 5
Saccharomyces_cerevisiae_T7 6
Saccharomyces_cerevisiae_FostersB 6
Saccharomyces_cerevisiae_FostersO 6
Saccharomyces_cerevisiae_VL3 7
Saccharomyces_cerevisiae_Vin13 7
Saccharomyces_cerevisiae_LalvinQA23 7
Saccharomyces_cerevisiae_AWRI796 6
Saccharomyces_cerevisiae_Sigma1278b 6
Saccharomyces_cerevisiae_W303 6
Saccharomyces_cerevisiae_JAY291 6
Saccharomyces_cerevisiae_AWRI1631 6
Saccharomyces_cerevisiae_YPS163 4
Saccharomyces_cerevisiae_M22 5
Saccharomyces_cerevisiae_T73 6
Saccharomyces_cerevisiae_CLIB215 6
Saccharomyces_cerevisiae_Y10 2
Saccharomyces_cerevisiae_YJM789_ 6
Saccharomyces_cerevisiae_YJM789 6
Saccharomyces_cerevisiae_RM11-1a 6
Saccharomyces_cerevisiae_RM11-1a_ 6
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   6
Schizosaccharomyces_pombe_972h-_ 8
Batrachochytrium_dendrobatidis_JEL423_ 11
Batrachochytrium_dendrobatidis_JAM81_ 12
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   10
Hordeum_vulgare_22   (Domesticated barley)   23
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   8
Trypanosoma_brucei_Lister_427_v4.1 6
Neospora_caninum_Nc-Liverpool_6.2 7
Plasmodium_falciparum_HB3_ 7
Plasmodium_falciparum_Dd2_ 5
Crinalium_epipsammum_PCC_9333 0
Arthrospira_platensis_NIES-39 0
Spiroplasma_chrysopicola_DF-1 0
Mycoplasma_parvum_str._Indiana 0
Clostridium_difficile_BI1 0
Clostridium_autoethanogenum_DSM_10061 0
Clostridium_kluyveri_NBRC_12016 0
Clostridium_botulinum_BKT015925 0
Enterococcus_faecium_DO 0
Lactobacillus_amylovorus_GRL_1112 0
Lactobacillus_reuteri_TD1 0
Streptococcus_intermedius_B196 0
Streptococcus_pneumoniae_CGSP14 0
Streptococcus_suis_SC070731 0
Streptococcus_suis_S735 0
Streptococcus_suis_SS12 0
Streptococcus_suis_A7 0
Streptococcus_suis_JS14 0
Streptococcus_suis_BM407 0
Streptococcus_suis_SC84 0
Streptococcus_suis_GZ1 0
Streptococcus_suis_98HAH33 0
Streptococcus_suis_05ZYH33 0
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 0
Bacillus_amyloliquefaciens_Y2 0
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 0
Bacillus_thuringiensis_serovar_chinensis_CT-43 0
Bacillus_thuringiensis_Bt407 0
Bacillus_thuringiensis_BMB171 0
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 0
Bacillus_cereus_AH187 0
Bacillus_cereus_Q1 0
Bacillus_cereus_F837/76 0
Bacillus_cereus_ATCC_10987 0
Staphylococcus_aureus_subsp._aureus_MSHR1132 0
Staphylococcus_aureus_subsp._aureus_SA957 0
Staphylococcus_aureus_subsp._aureus_SA40 0
Staphylococcus_aureus_subsp._aureus_M013 0
Alistipes_shahii_WAL_8301 0
Candidatus_Sulcia_muelleri_GWSS 0
Riemerella_anatipestifer_RA-CH-2 0
Riemerella_anatipestifer_RA-GD 0
Leptospira_interrogans_serovar_Lai_str._56601 0
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 0
Borrelia_burgdorferi_JD1 0
Borrelia_burgdorferi_N40 0
Borrelia_burgdorferi_ZS7 0
Desulfobacula_toluolica_Tol2 0
Lawsonia_intracellularis_N343 0
Anaplasma_phagocytophilum_str._Dog2 0
Anaplasma_phagocytophilum_str._HZ2 0
Anaplasma_phagocytophilum_str._JM 0
Haemophilus_influenzae_10810 0
Haemophilus_influenzae_86-028NP 0
Vibrio_fischeri_ES114 0
Serratia_plymuthica_S13 0
Escherichia_coli_Xuzhou21 0
Escherichia_coli_55989 0
Escherichia_coli_O157:H7_str._Sakai 0
Escherichia_coli_O157:H7_str._EDL933 0
Acinetobacter_baumannii_ZW85-1 0
Acinetobacter_baumannii_BJAB0715 0
Acinetobacter_baumannii_D1279779 0
Acinetobacter_junii__SH205 0
Sulfolobus_islandicus_LAL14/1 0
Sulfolobus_islandicus_REY15A 0
Sulfolobus_islandicus_HVE10/4 0
Sulfolobus_islandicus_Y.G.57.14 0
Sulfolobus_islandicus_L.S.2.15 0
Sulfolobus_islandicus_M.16.27 0
Sulfolobus_islandicus_M.14.25 0
Sulfolobus_islandicus_M.16.4 0
Sulfolobus_islandicus_L.D.8.5 0
Sulfolobus_solfataricus_98/2 0
Methanolobus_psychrophilus_R15 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   6
Pan_troglodytes_69_2.1.4   (Chimpanzee)   12
Gorilla_gorilla_69_3.1   (Western gorilla)   10
Pongo_abelii_69_2   (Sumatran orangutan)   10
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   11
Macaca_mulatta_69_1   (Rhesus monkey)   12
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   8
Otolemur_garnettii_69_3   (Small-eared galago)   14
Microcebus_murinus_69_1   (Gray mouse lemur)   10
Rattus_norvegicus_69_3.4   (Norway rat)   12
Mus_musculus_69_38   (House mouse)   11
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   9
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   11
Cavia_porcellus_69_3   (Domestic guinea pig)   11
Oryctolagus_cuniculus_69_2   (Rabbit)   6
Ochotona_princeps_69   (American pika)   8
Tupaia_belangeri_69   (Northern tree shrew)   9
Sus_scrofa_69_10.2   (Pig)   9
Bos_taurus_69_3.1   (Cattle)   11
Vicugna_pacos_69_1   (Alpaca)   5
Tursiops_truncatus_69_1   (Bottlenose dolphin)   8
Mustela_putorius_furo_69_1.0   (Domestic ferret)   10
Ailuropoda_melanoleuca_69_1   (Giant panda)   7
Canis_familiaris_69_3.1   (Dog)   8
Felis_catus_69   (Domestic cat)   9
Equus_caballus_69_2   (Horse)   10
Myotis_lucifugus_69_2.0   (Little brown bat)   11
Pteropus_vampyrus_69_1   (Large flying fox)   9
Sorex_araneus_69_1   (European shrew)   8
Erinaceus_europaeus_69   (Western European hedgehog)   10
Procavia_capensis_69_1   (Cape rock hyrax)   9
Loxodonta_africana_69_3   (African savanna elephant)   10
Echinops_telfairi_69   (Small Madagascar hedgehog)   7
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   7
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   6
Macropus_eugenii_69_1.0   (Tammar wallaby)   8
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   7
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   5
Ornithorhynchus_anatinus_69_5   (Platypus)   10
Petromyzon_marinus_69_7.0   (Sea lamprey)   4
Meleagris_gallopavo_69_2   (Turkey)   10
Gallus_gallus_69_2   (Chicken)   8
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   8
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   10
Anolis_carolinensis_69_2.0   (Green anole)   10
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   9
Latimeria_chalumnae_69_1   (Coelacanth)   9
Gadus_morhua_69_1   (Atlantic cod)   12
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   10
Takifugu_rubripes_69_4   (Torafugu)   11
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   9
Oryzias_latipes_69_1   (Japanese medaka)   11
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   12
Oreochromis_niloticus_69_1.0   (Nile tilapia)   12
Danio_rerio_69_9   (Zebrafish)   10
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   5
Ciona_intestinalis_69   (Vase tunicate)   6
Drosophila_melanogaster_69_5   (Fruit fly)   7
Caenorhabditis_elegans_69_215   (Roundworm)   6
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   6
Arabidopsis_thaliana_10   (Thale cress)   13

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   105
Homo_sapiens__(NCBI_version)   (Human)   14
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   10
Heliconius_numata__(Incomplete) 9
Loa_loa_v3.3_(Request)   (Eye worm)   6
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   9
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   6
Moniliophthora_perniciosa_FA553__(Genome_survey) 3
Encephalitozoon_intestinalis__(endoparasite) 4
Encephalitozoon_cuniculi_(endoparasite) 4
Picea_sitchensis__(Incomplete)   (Sitka spruce)   2
Lotus_japonicus__(Early_assembly) 18
Malus_x_domestica_(Duplicate)   (Apple)   19
Ricinus_communis__(Early_assembly)   (Castor bean)   10
Nicotiana_benthamiana_0.4.4_(Early_draft) 27
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   16
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   16
Phoenix_dactylifera__(Early_draft)   (Date palm)   14
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 0
NCBI_plasmid_sequences_(Plasmids) 0
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 212
Protozoadb_2010_08_(Protozoadb) 265
PDB_chains_(SCOP_1.75)_(PDB) 7
STRING_v9.0.5_(STRING) 930
NCBI_2017_08_genome 9250
UniProt__viral_sequences_(Viral) 0
Uniprot_2018_03_genome 11688
Core_Eukaryotic_Genes_458_(CEGMA) 18
NCBI_viral_sequences_(Viral) 0
TargetDB__(Targets) 64
Protein_Data_Bank_(all_PDB_sequenc) 78

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