SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 68906,68906,142921,47587,56399 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

68906 - SAP domain
68906 - SAP domain
142921 - WGR domain-like
47587 - Domain of poly(ADP-ribose) polymerase
56399 - ADP-ribosylation

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Selaginella_moellendorffii_ 2
Eucalyptus_grandis_v201   (Rose gum)   1
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1
Gossypium_raimondii_v221 1
Citrus_clementina_v165 1
Citrus_sinensis_v154   (Sweet orange)   2
Thellungiella_halophila_v173 1
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   2
Capsella_rubella_v183 1
Arabidopsis_lyrata_   (Lyrate rockcress)   1
Arabidopsis_thaliana_10   (Thale cress)   1
Carica_papaya_   (Papaya)   1
Cucumis_sativus_v122   (Cucumber)   1
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   0
Prunus_persica_v139   (Peach)   2
Linum_usitatissimum_v200   (Flax)   2
Manihot_esculenta_v147   (Cassava)   1
Mimulus_guttatus_v140   (Spotted monkey flower)   0
Actinidia_chinensis_Hongyang_ 1
Amborella_trichopoda_22 2
Physcomitrella_patens 1

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1

Longest transcript per gene
Genome     Number
Arabidopsis_thaliana_10   (Thale cress)   1

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 1
STRING_v9.0.5_(STRING) 3
Uniprot_2018_03_genome 756
NCBI_2017_08_genome 85

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