SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for 69318,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

69318 - Integrin alpha N-terminal domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   3
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   2
Pongo_abelii_76_2   (Sumatran orangutan)   2
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Papio_anubis_76   (Olive baboon)   2
Macaca_mulatta_76_1   (Rhesus monkey)   3
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   6
Otolemur_garnettii_76_3   (Small-eared galago)   1
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Rattus_norvegicus_76_5.0   (Norway rat)   2
Mus_musculus_76_38   (House mouse)   2
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   2
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Ochotona_princeps_76   (American pika)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   3
Bos_taurus_76_3.1   (Cattle)   2
Ovis_aries_76_3.1   (Sheep)   2
Vicugna_pacos_76_1   (Alpaca)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   0
Canis_familiaris_76_3.1   (Dog)   1
Felis_catus_76_6.2   (Domestic cat)   1
Equus_caballus_76_2   (Horse)   1
Myotis_lucifugus_76_2.0   (Little brown bat)   1
Pteropus_vampyrus_76_1   (Large flying fox)   1
Sorex_araneus_76_1   (European shrew)   1
Erinaceus_europaeus_76   (Western European hedgehog)   2
Procavia_capensis_76_1   (Cape rock hyrax)   1
Loxodonta_africana_76_3   (African savanna elephant)   3
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1
Macropus_eugenii_76_1.0   (Tammar wallaby)   2
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   3
Ornithorhynchus_anatinus_76_5   (Platypus)   2
Saccoglossus_kowalevskii_v3.0 4
Petromyzon_marinus_76_7.0   (Sea lamprey)   1
Meleagris_gallopavo_76_2   (Turkey)   1
Gallus_gallus_76_4   (Chicken)   1
Anas_platyrhynchos_76_1.0   (Mallard)   1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   2
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   1
Anolis_carolinensis_76_2.0   (Green anole)   1
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_76_1   (Coelacanth)   1
Lepisosteus_oculatus_76   (Spotted gar)   1
Gadus_morhua_76_1   (Atlantic cod)   2
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   2
Takifugu_rubripes_76_4   (Torafugu)   8
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   3
Oryzias_latipes_76_1   (Japanese medaka)   2
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   2
Poecilia_formosa_76   (Amazon molly)   3
Oreochromis_niloticus_76_1.0   (Nile tilapia)   2
Astyanax_mexicanus_76   (Mexican tetra)   2
Danio_rerio_76_9   (Zebrafish)   4
Oikopleura_dioica 2
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_76   (Vase tunicate)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   4
Adineta_vaga 6
Octopus_bimaculoides_280 0
Crassostrea_gigas_22   (Pacific oyster)   4
Lottia_gigantea_   (Owl limpet)   3
Helobdella_robusta_ 2
Capitella_sp._I_ 3
Danaus_plexippus_OGS1.0   (Monarch butterfly)   3
Heliconius_melpomene_   (Postman butterfly)   3
Bombyx_mori_   (Domestic silkworm)   3
Nasonia_vitripennis_   (Jewel wasp)   3
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   4
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   2
Linepithema_humile_v1.1   (Argentine ant)   1
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   2
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1
Atta_cephalotes_v1.1 1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   2
Lucilia_cuprina   (Australian sheep blowfly)   1
Drosophila_grimshawi_1.3 1
Drosophila_willistoni_1.3 1
Drosophila_pseudoobscura_2.13 1
Drosophila_persimilis_1.3 1
Drosophila_suzukii 2
Drosophila_yakuba_1.3 1
Drosophila_simulans_1.3 1
Drosophila_sechellia_1.3 1
Drosophila_melanogaster_76_5   (Fruit fly)   2
Drosophila_erecta_1.3 1
Drosophila_ananassae_1.3 1
Drosophila_virilis_1.2 1
Drosophila_mojavensis_1.3 1
Megaselia_scalaris_22 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1
Anopheles_darlingi_22   (American malaria mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   1
Tribolium_castaneum_3.0   (Red flour beetle)   1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   2
Acyrthosiphon_pisum_   (Pea aphid)   1
Daphnia_pulex_   (Common water flea)   3
Strigamia_maritima_22 4
Sarcoptes_scabiei 3
Tetranychus_urticae_   (Two-spotted spider mite)   2
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   1
Pristionchus_pacificus_ 0
Meloidogyne_incognita_   (Southern root-knot nematode)   1
Meloidogyne_hapla_ 1
Onchocerca_volvulus_22 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   2
Caenorhabditis_japonica_ 1
Caenorhabditis_brenneri_ 1
Caenorhabditis_remanei_ 1
Caenorhabditis_elegans_76_235   (Roundworm)   1
Caenorhabditis_briggsae_2 1
Trichinella_spiralis_22 0
Hymenolepis_microstoma_ 1
Echinococcus_multilocularis_ 1
Echinococcus_granulosus_ 1
Taenia_solium_   (Pork tapeworm)   1
Schistosoma_mansoni_ 1
Mnemiopsis_leidyi   (Sea walnut)   1
Thelohanellus_kitauei 10
Acropora_digitifera_v1.0 1
Nematostella_vectensis_1.0   (Starlet sea anemone)   3
Hydra_vulgaris 3
Amphimedon_queenslandica 1
Trichoplax_adhaerens_ 3
Proterospongia_sp._ATCC_50818_ 0
Monosiga_brevicollis_ 5
Sphaeroforma_arctica_JP610_ 1
Capsaspora_owczarzaki_ATCC_30864_ 1
Conidiobolus_coronatus_NRRL28638_v1.0 1
Mortierella_verticillata_NRRL_6337_ 1
Phycomyces_blakesleeanus_ 2
Rhizopus_oryzae_RA_99-880_ 1
Mucor_circinelloides_ 1
Rhizomucor_miehei_CAU432_ 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1
Melampsora_laricis-populina_ 1
Rhodotorula_graminis_WP1_v1.0 1
Sporobolomyces_roseus_IAM_13481_ 1
Wallemia_sebi_v1.0 1
Sphaerobolus_stellatus_v1.0 1
Hydnomerulius_pinastri_v2.0 1
Pisolithus_tinctorius_Marx_270_v1.0 1
Pleurotus_ostreatus_   (Oyster mushroom)   0
Amanita_thiersii_Skay4041_v1.0 0
Galerina_marginata_v1.0 1
Agaricus_bisporus_var._bisporus_ 0
Schizophyllum_commune_ 1
Gloeophyllum_trabeumv1.0 1
Punctularia_strigosozonata_v1.0 0
Fomitiporia_mediterranea_v1.0 1
Wolfiporia_cocos_MD-104_SS10__v1.0 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 1
Phanerochaete_chrysosporium_RP-78_2.1 1
Tremella_mesenterica_   (Witches' butter)   0
Apiospora_montagnei_NRRL_25634_v1.0 0
Magnaporthe_poae_ATCC_64411_22 0
Podospora_anserina_ 0
Thielavia_terrestris_NRRL_8126_ 0
Chaetomium_globosum_CBS_148.51_ 0
Verticillium_albo-atrum_VaMs.102_ 0
Verticillium_dahliae_VdLs.17_ 0
Acremonium_alcalophilumv_1.0 0
Glomerella_graminicola_22 0
Fusarium_graminearum_ 1
Nectria_haematococca_mpVI_ 0
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1
Fusarium_verticillioides_7600_ 2
Trichoderma_asperellum_CBS_433.97_v1.0 0
Trichoderma_atroviride_ 0
Trichoderma_citrinoviride_v1.0 0
Trichoderma_reesei_1.2 0
Trichoderma_virens_Gv29-8_ 0
Trichoderma_longibrachiatum_ATCC_18648_v1.0 0
Trichoderma_harzianum_CBS_226.95_v1.0 0
Setosphaeria_turcica_v1.0 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 0
Cochliobolus_lunatus_m118_v2.0 1
Zasmidium_cellare_ATCC_36951_v1.0 0
Microsporum_canis_CBS_113480_ 0
Aspergillus_zonatus_v1.0 0
Aspergillus_fumigatus_Af293 1
Aspergillus_nidulans_FGSC_A4_ 0
Aspergillus_sydowii_v1.0 1
Aspergillus_versicolor_v1.0 1
Aspergillus_terreus_NIH2624_ 0
Aspergillus_flavus_NRRL3357_ 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   1
Hansenula_polymorpha_v2.0 0
Dekkera_bruxellensis_CBS_2499_v2.0 0
Pichia_membranifaciensv1.0 0
Wickerhamomyces_anomalus 0
Kluyveromyces_thermotolerans_CBS_6340 0
Lachancea_kluyveri_ 0
Kluyveromyces_waltii 0
Zygosaccharomyces_rouxii_ 0
Saccharomyces_paradoxus_MIT 0
Saccharomyces_bayanus_MIT 0
Catenaria_anguillulae_PL171_v1.0 2
Allomyces_macrogynus_ATCC_38327_ 3
Spizellomyces_punctatus_DAOM_BR117_ 1
Dictyostelium_discoideum 4
Dictyostelium_purpureum_ 1
Entamoeba_dispar_1.2 2
Entamoeba_invadens_1.2 1
Entamoeba_histolytica_1 1
Selaginella_moellendorffii_ 0
Pinus_taeda   (Loblolly pine)   1
Picea_abies   (Norway spruce)   1
Eucalyptus_grandis_v201   (Rose gum)   0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Gossypium_raimondii_v221 0
Citrus_clementina_v165 0
Citrus_sinensis_v154   (Sweet orange)   0
Thellungiella_halophila_v173 0
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   0
Capsella_rubella_v183 0
Arabidopsis_lyrata_   (Lyrate rockcress)   0
Arabidopsis_thaliana_10   (Thale cress)   0
Carica_papaya_   (Papaya)   0
Medicago_truncatula_   (Barrel medic)   0
Phaseolus_vulgaris_v186   (French bean)   0
Glycine_max_v109   (Soybean)   0
Cucumis_sativus_v122   (Cucumber)   0
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   0
Prunus_persica_v139   (Peach)   0
Populus_trichocarpa_v156   (Black cottonwood)   1
Vitis_vinifera_   (Wine grape)   0
Mimulus_guttatus_v140   (Spotted monkey flower)   0
Solanum_lycopersicum_v.2.3   (Tomato)   0
Solanum_tuberosum_   (Potato)   1
Actinidia_chinensis_Hongyang_ 0
Aquilegia_coerulea_v195 0
Triticum_aestivum_22   (Bread wheat)   0
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_barthii_22   (African wild rice)   0
Oryza_meridionalis_22 0
Oryza_glumaepatula_22 0
Oryza_glaberrima   (African rice)   0
Oryza_punctata_22 0
Oryza_nivara_22 0
Oryza_brachyantha_22   (Malo sina)   0
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   0
Oryza_sativa_v193   (Rice)   0
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   0
Panicum_virgatum_v202   (Switchgrass)   0
Setaria_italica_v164   (Foxtail millet)   0
Zea_mays_subsp._mays_   (Maize)   1
Zea_mays_v181   (Maize)   1
Sorghum_bicolor_   (Sorghum)   0
Musa_balbisiana   (Balbis banana)   0
Musa_acuminata_22   (Wild Malaysian banana)   0
Amborella_trichopoda_22 0
Physcomitrella_patens 0
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Asterochloris_sp._Cgr/DA1pho_v1.0 0
Chlorella_vulgaris_ 0
Volvox_carteri_f._nagariensis_ 1
Volvox_carteri_v199 0
Chlamydomonas_reinhardtii_4.0 1
Ostreococcus_sp._RCC809_ 1
Ostreococcus_lucimarinus_CCE9901_ 0
Ostreococcus_tauri_ 0
Bathycoccus_prasinos_ 0
Micromonas_sp._RCC299_ 1
Micromonas_pusilla_CCMP1545_v3.0 1
Cyanidioschyzon_merolae_strain_10D_22 1
Cyanidioschyzon_merolae 1
Porphyridium_purpureum_02_2012 0
Thecamonas_trahens_ATCC_50062_ 9
Bigelowiella_natans_CCMP2755_22 0
Cyanophora_paradoxa_ 1
Leishmania_mexicana_2.4 1
Leishmania_major_strain_Friedlin_ 1
Leishmania_infantum_JPCM5_2.4 0
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1
Trypanosoma_vivax_ 1
Trypanosoma_cruzi_strain_CL_Brener 2
Trypanosoma_congolense_2.4 0
Trypanosoma_brucei_gambiense_v4.1 0
Trypanosoma_brucei_TREU927_v4.1 0
Ectocarpus_siliculosus 3
Aureococcus_anophagefferens_ 6
Pythium_iwayamai_DAOM_BR242034_22 1
Pythium_arrhenomanes_ATCC_12531_22 0
Pythium_ultimum_v1.7-2 1
Pythium_aphanidermatum_DAOM_BR444_22 0
Phytophthora_infestans_T30-4_ 0
Fragilariopsis_cylindrus 1
Thalassiosira_pseudonana_CCMP1335 0
Perkinsus_marinus_ATCC_50983_ 1
Paramecium_tetraurelia_ 1
Tetrahymena_thermophila_SB210_1_ 1
Ichthyophthirius_multifiliis_strain_G5_ 1
Cryptosporidium_hominis 1
Cryptosporidium_muris 0
Cryptosporidium_parvum_Iowa_II 1
Neospora_caninum 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 0
Babesia_bovis_T2Bo_ 2
Theileria_parva__ 1
Theileria_annulata 1
Plasmodium_falciparum_3D7_ 0
Plasmodium_vivax_SaI-1_7.0 0
Plasmodium_knowlesi_strain_H_ 0
Plasmodium_yoelii_ssp._yoelii_1_ 0
Plasmodium_chabaudi_ 0
Plasmodium_berghei_ANKA_ 0
Symbiodinium_minutum_clade_B1_v1.2 5
Naegleria_gruberi_ 0
Trichomonas_vaginalis_ 4
Guillardia_theta_CCMP2712_v1.0_ 0
Emiliania_huxleyi_CCMP1516_ 7
Thermobaculum_terrenum_ATCC_BAA-798 0
Leptolyngbya_sp._PCC_7376 0
Pseudanabaena_sp._PCC_7367 0
Acaryochloris_marina_MBIC11017 1
Synechocystis_sp._PCC_6803 0
Synechococcus_sp._PCC_6312 0
Synechococcus_elongatus_PCC_7942 0
Microcoleus_sp._PCC_7113 1
Trichodesmium_erythraeum_IMS101 0
Cyanothece_sp._PCC_8802 0
Microcystis_aeruginosa_NIES-843 1
Gloeobacter_violaceus_PCC_7421 1
Rivularia_sp._PCC_7116 1
Calothrix_sp._PCC_7507 0
Nostoc_punctiforme_PCC_73102 1
Nostoc_sp._PCC_7524 0
Anabaena_sp._90 0
Conexibacter_woesei_DSM_14684 9
Thermobispora_bispora_DSM_43833 0
Catenulispora_acidiphila_DSM_44928 0
Stackebrandtia_nassauensis_DSM_44728 4
Thermobifida_fusca_YX 0
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 0
Thermomonospora_curvata_DSM_43183 1
Streptosporangium_roseum_DSM_43021 1
Streptomyces_coelicolor_A3(2) 0
Streptomyces_sp._PAMC26508 0
Streptomyces_flavogriseus_ATCC_33331 0
Streptomyces_sp._SirexAA-E 0
Streptomyces_griseus_subsp._griseus_NBRC_13350 1
Streptomyces_bingchenggensis_BCW-1 4
Streptomyces_violaceusniger_Tu_4113 1
Streptomyces_avermitilis_MA-4680 9
Streptomyces_scabiei_87.22 10
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 3
Actinosynnema_mirum_DSM_43827 0
Amycolatopsis_mediterranei_U32 0
Kribbella_flavida_DSM_17836 0
Microlunatus_phosphovorus_NM-1 5
Salinispora_arenicola_CNS-205 0
Salinispora_tropica_CNB-440 0
Verrucosispora_maris_AB-18-032 0
Micromonospora_sp._L5 0
Micromonospora_aurantiaca_ATCC_27029 0
Actinoplanes_sp._N902-109 0
Actinoplanes_sp._SE50/110 1
Rhodococcus_jostii_RHA1 0
Rhodococcus_opacus_B4 0
Rhodococcus_erythropolis_PR4 0
Mycobacterium_rhodesiae_NBB3 0
Sanguibacter_keddieii_DSM_10542 0
Jonesia_denitrificans_DSM_20603 0
Isoptericola_variabilis_225 0
Cellulomonas_flavigena_DSM_20109 0
Cellulomonas_fimi_ATCC_484 0
Arthrobacter_phenanthrenivorans_Sphe3 0
Arthrobacter_chlorophenolicus_A6 0
Arthrobacter_aurescens_TC1 0
Arthrobacter_sp._Rue61a 0
Arthrobacter_sp._FB24 0
Arcanobacterium_haemolyticum_DSM_20595 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 2
Dehalogenimonas_lykanthroporepellens_BL-DC-9 0
Anaerolinea_thermophila_UNI-1 1
Herpetosiphon_aurantiacus_DSM_785 4
Roseiflexus_sp._RS-1 2
Roseiflexus_castenholzii_DSM_13941 2
Chloroflexus_sp._MS-G 1
Chloroflexus_sp._Y-400-fl 0
Chloroflexus_aggregans_DSM_9485 1
Chloroflexus_aurantiacus_J-10-fl 0
Deinococcus_gobiensis_I-0 0
Meiothermus_ruber_DSM_1279 1
Acidaminococcus_intestini_RyC-MR95 1
Acidaminococcus_fermentans_DSM_20731 1
Symbiobacterium_thermophilum_IAM_14863 1
Clostridium_cellulolyticum_H10 0
Clostridium_thermocellum_ATCC_27405 0
Ruminococcus_albus_7 0
Oscillibacter_valericigenes_Sjm18-20 1
Desulfotomaculum_reducens_MI-1 1
Desulfotomaculum_acetoxidans_DSM_771 0
Eubacterium_eligens_ATCC_27750 0
Clostridium_difficile_630 1
Clostridium_sticklandii_DSM_519 1
Clostridium_saccharolyticum_WM1 1
Clostridium_phytofermentans_ISDg 0
Clostridium_lentocellum_DSM_5427 0
Butyrivibrio_proteoclasticus_B316 0
Clostridium_sp._BNL1100 0
Clostridium_novyi_NT 1
Clostridium_ljungdahlii_DSM_13528 1
Clostridium_beijerinckii_NCIMB_8052 1
Clostridium_cellulovorans_743B 0
Clostridium_botulinum_A_str._ATCC_3502 1
Mahella_australiensis_50-1_BON 0
Caldicellulosiruptor_kronotskyensis_2002 0
Caldicellulosiruptor_owensensis_OL 0
Caldicellulosiruptor_lactoaceticus_6A 0
Caldicellulosiruptor_kristjanssonii_177R1B 0
Caldicellulosiruptor_bescii_DSM_6725 0
Brevibacillus_brevis_NBRC_100599 2
Paenibacillus_sp._JDR-2 0
Paenibacillus_terrae_HPL-003 0
Paenibacillus_mucilaginosus_3016 0
Paenibacillus_polymyxa_M1 0
Solibacillus_silvestris_StLB046 1
Bacillus_sp._JS 0
Bacillus_atrophaeus_1942 1
Bacillus_subtilis_subsp._subtilis_str._168 0
Bacillus_licheniformis_DSM_13_=_ATCC_14580 0
Bacillus_halodurans_C-125 0
Bacillus_thuringiensis_str._Al_Hakam 1
Bacillus_cereus_03BB102 1
Bacillus_anthracis_str._A0248 1
Bacillus_clausii_KSM-K16 0
Candidatus_Cloacamonas_acidaminovorans 0
Melioribacter_roseus_P3M 1
Ignavibacterium_album_JCM_16511 3
Chlorobium_chlorochromatii_CaD3 0
Chlorobium_phaeobacteroides_DSM_266 0
Chlorobium_limicola_DSM_245 0
Chloroherpeton_thalassium_ATCC_35110 0
Haliscomenobacter_hydrossis_DSM_1100 1
Saprospira_grandis_str._Lewin 0
Niastella_koreensis_GR20-10 0
Chitinophaga_pinensis_DSM_2588 0
Salinibacter_ruber_M8 0
Rhodothermus_marinus_DSM_4252 1
Flexibacter_litoralis_DSM_6794 0
Candidatus_Amoebophilus_asiaticus_5a2 0
Belliella_baltica_DSM_15883 0
Cyclobacterium_marinum_DSM_745 2
Marivirga_tractuosa_DSM_4126 1
Fibrella_aestuarina 0
Leadbetterella_byssophila_DSM_17132 0
Dyadobacter_fermentans_DSM_18053 1
Cytophaga_hutchinsonii_ATCC_33406 3
Spirosoma_linguale_DSM_74 1
Runella_slithyformis_DSM_19594 0
Parabacteroides_distasonis_ATCC_8503 0
Tannerella_forsythia_ATCC_43037 0
Prevotella_melaninogenica_ATCC_25845 0
Prevotella_denticola_F0289 0
Prevotella_ruminicola_23 0
Porphyromonas_gingivalis_ATCC_33277 0
Bacteroides_salanitronis_DSM_18170 0
Bacteroides_vulgatus_ATCC_8482 0
Bacteroides_thetaiotaomicron_VPI-5482 0
Pedobacter_saltans_DSM_12145 0
Solitalea_canadensis_DSM_3403 0
Pedobacter_heparinus_DSM_2366 1
Fluviicola_taffensis_DSM_16823 3
Owenweeksia_hongkongensis_DSM_17368 0
Zunongwangia_profunda_SM-A87 0
Gramella_forsetii_KT0803 0
Maribacter_sp._HTCC2170 0
Robiginitalea_biformata_HTCC2501 0
Croceibacter_atlanticus_HTCC2559 0
Aequorivita_sublithincola_DSM_14238 3
Zobellia_galactanivorans 0
Muricauda_ruestringensis_DSM_13258 0
Cellulophaga_algicola_DSM_14237 0
Cellulophaga_lytica_DSM_7489 0
Polaribacter_sp._MED152 0
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 0
Capnocytophaga_ochracea_DSM_7271 0
Weeksella_virosa_DSM_16922 1
Flavobacterium_branchiophilum_FL-15 0
Flavobacterium_columnare_ATCC_49512 0
Flavobacterium_johnsoniae_UW101 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Phycisphaera_mikurensis_NBRC_102666 0
Isosphaera_pallida_ATCC_43644 1
Planctomyces_brasiliensis_DSM_5305 0
Rhodopirellula_baltica_SH_1 1
Pirellula_staleyi_DSM_6068 1
Coraliomargarita_akajimensis_DSM_45221 0
Opitutus_terrae_PB90-1 1
Turneriella_parva_DSM_21527 1
Leptospira_interrogans_serovar_Lai_str._IPAV 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 0
Treponema_succinifaciens_DSM_2489 2
Treponema_denticola_ATCC_35405 0
Spirochaeta_thermophila_DSM_6192 0
Thermodesulfatator_indicus_DSM_15286 1
Calditerrivibrio_nitroreducens_DSM_19672 1
Denitrovibrio_acetiphilus_DSM_12809 0
Flexistipes_sinusarabici_DSM_4947 1
Fervidobacterium_pennivorans_DSM_9078 1
Thermosipho_melanesiensis_BI429 1
Thermosipho_africanus_TCF52B 1
Thermotoga_sp._RQ2 1
Thermotoga_petrophila_RKU-1 0
Desulfurobacterium_thermolithotrophum_DSM_11699 1
Candidatus_Solibacter_usitatus_Ellin6076 12
Granulicella_tundricola_MP5ACTX9 1
Granulicella_mallensis_MP5ACTX8 0
Candidatus_Koribacter_versatilis_Ellin345 9
Terriglobus_saanensis_SP1PR4 0
Terriglobus_roseus_DSM_18391 0
Acidobacterium_capsulatum_ATCC_51196 1
candidate_division_SR1_bacterium_RAAC1_SR1_1 0
Bacteriovorax_marinus_SJ 1
Bdellovibrio_bacteriovorus_HD100 1
Desulfarculus_baarsii_DSM_2075 0
Syntrophus_aciditrophicus_SB 1
Desulfomonile_tiedjei_DSM_6799 1
Syntrophobacter_fumaroxidans_MPOB 1
Desulfurivibrio_alkaliphilus_AHT2 0
Desulfobulbus_propionicus_DSM_2032 0
Desulfatibacillum_alkenivorans_AK-01 0
Desulfobacterium_autotrophicum_HRM2 0
Desulfococcus_oleovorans_Hxd3 0
Desulfohalobium_retbaense_DSM_5692 0
Desulfomicrobium_baculatum_DSM_4028 1
Desulfovibrio_piezophilus 1
Desulfovibrio_aespoeensis_Aspo-2 1
Lawsonia_intracellularis_PHE/MN1-00 0
Desulfovibrio_magneticus_RS-1 0
Desulfovibrio_salexigens_DSM_2638 0
Desulfovibrio_africanus_str._Walvis_Bay 1
Geobacter_daltonii_FRC-32 0
Geobacter_uraniireducens_Rf4 1
Geobacter_lovleyi_SZ 1
Geobacter_metallireducens_GS-15 0
Haliangium_ochraceum_DSM_14365 1
Sorangium_cellulosum_'So_ce_56' 3
Stigmatella_aurantiaca_DW4/3-1 3
Corallococcus_coralloides_DSM_2259 2
Myxococcus_xanthus_DK_1622 3
Myxococcus_fulvus_HW-1 0
Burkholderia_rhizoxinica_HKI_454 0
Ralstonia_eutropha_H16 0
Burkholderia_thailandensis_E264 0
Burkholderia_pseudomallei_1106a 0
Burkholderia_mallei_SAVP1 1
Verminephrobacter_eiseniae_EF01-2 0
Delftia_sp._Cs1-4 0
Nitrosospira_multiformis_ATCC_25196 0
Gallionella_capsiferriformans_ES-2 0
Magnetococcus_marinus_MC-1 0
Asticcacaulis_excentricus_CB_48 0
Brevundimonas_subvibrioides_ATCC_15264 0
Caulobacter_segnis_ATCC_21756 1
Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 0
Hyphomonas_neptunium_ATCC_15444 0
Dinoroseobacter_shibae_DFL_12 0
Pseudovibrio_sp._FO-BEG1 0
Ruegeria_sp._TM1040 0
Ruegeria_pomeroyi_DSS-3 2
Roseobacter_litoralis_Och_149 1
Rhodospirillum_centenum_SW 1
Azospirillum_lipoferum_4B 1
Azospirillum_sp._B510 1
Azospirillum_brasilense_Sp245 0
Micavibrio_aeruginosavorus_ARL-13 0
alpha_proteobacterium_HIMB59 0
Wolbachia_endosymbiont_of_Culex_quinquefasciatus_Pel 1
Xanthobacter_autotrophicus_Py2 0
Sinorhizobium_fredii_NGR234 0
Sinorhizobium_medicae_WSM419 0
Agrobacterium_vitis_S4 0
Mesorhizobium_opportunistum_WSM2075 0
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 0
Mesorhizobium_loti_MAFF303099 0
Methylocella_silvestris_BL2 0
Pelagibacterium_halotolerans_B2 0
Methylocystis_sp._SC2 0
Saccharophagus_degradans_2-40 0
Teredinibacter_turnerae_T7901 0
Cellvibrio_japonicus_Ueda107 0
Vibrio_sp._Ex25 0
Vibrio_harveyi_ATCC_BAA-1116 1
Vibrio_anguillarum_775 0
Vibrio_cholerae_O395 0
Psychromonas_ingrahamii_37 0
Shewanella_denitrificans_OS217 0
Shewanella_baltica_OS185 0
Shewanella_woodyi_ATCC_51908 1
Shewanella_putrefaciens_CN-32 0
Pseudoalteromonas_sp._SM9913 0
Pseudoalteromonas_atlantica_T6c 1
Glaciecola_sp._4H-3-7+YE-5 0
Glaciecola_nitratireducens_FR1064 0
Alteromonas_sp._SN2 1
Kangiella_koreensis_DSM_16069 0
Hahella_chejuensis_KCTC_2396 2
Marinomonas_posidonica_IVIA-Po-181 0
Marinomonas_mediterranea_MMB-1 0
Methylomicrobium_alcaliphilum 0
Methylococcus_capsulatus_str._Bath 1
Nitrosococcus_watsonii_C-113 0
Nitrosococcus_oceani_ATCC_19707 1
Legionella_longbeachae_NSW150 1
gamma_proteobacterium_HdN1 0
Photorhabdus_asymbiotica 0
Photorhabdus_luminescens_subsp._laumondii_TTO1 0
Xenorhabdus_bovienii_SS-2004 0
Xenorhabdus_nematophila_ATCC_19061 0
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 0
Yersinia_pseudotuberculosis_IP_31758 0
Yersinia_pestis_Pestoides_F 0
Pantoea_sp._At-9b 0
Erwinia_sp._Ejp617 0
Erwinia_pyrifoliae_Ep1/96 0
Enterobacteriaceae_bacterium_strain_FGI_57 0
Enterobacter_sp._R4-368 0
Enterobacter_cloacae_subsp._dissolvens_SDM 0
Pseudomonas_sp._UW4 0
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 0
Pseudomonas_entomophila_L48 0
Pseudomonas_syringae_pv._tomato_str._DC3000 0
Candidatus_Korarchaeum_cryptofilum_OPF8 1
Ignisphaera_aggregans_DSM_17230 1
Aeropyrum_pernix_K1 0
Staphylothermus_marinus_F1 1
Methanosarcina_acetivorans_C2A 0
Methanosarcina_barkeri_str._Fusaro 0
Thermococcus_sp._4557 0
Thermococcus_kodakarensis_KOD1 1
Thermococcus_barophilus_MP 0
Salinarchaeum_sp._Harcht-Bsk1 1
Halopiger_xanaduensis_SH-6 0
Haloterrigena_turkmenica_DSM_5511 0
Halorubrum_lacusprofundi_ATCC_49239 1
Halogeometricum_borinquense_DSM_11551 1
Halomicrobium_mukohataei_DSM_12286 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   2
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   1
Batrachochytrium_dendrobatidis_JEL423_ 1
Batrachochytrium_dendrobatidis_JAM81_ 0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0
Hordeum_vulgare_22   (Domesticated barley)   0
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Trypanosoma_brucei_Lister_427_v4.1 0
Neospora_caninum_Nc-Liverpool_6.2 0
Plasmodium_falciparum_HB3_ 0
Plasmodium_falciparum_Dd2_ 1
Synechocystis_sp._PCC_6803_substr._PCC-P 0
Synechocystis_sp._PCC_6803_substr._PCC-N 0
Synechocystis_sp._PCC_6803_substr._GT-I 0
Synechocystis_sp._PCC_6803 0
Synechococcus_sp._JA-2-3B'a(2-13) 1
Synechococcus_sp._JA-3-3Ab 1
Synechococcus_sp._CC9902 0
Synechococcus_sp._WH_8102 0
Synechococcus_sp._WH_7803 0
Synechococcus_elongatus_PCC_6301 0
Prochlorococcus_marinus_str._MIT_9303 0
Oscillatoria_nigro-viridis_PCC_7112 0
Oscillatoria_acuminata_PCC_6304 0
Cyanothece_sp._PCC_7822 1
Cyanothece_sp._PCC_7424 0
Cyanothece_sp._ATCC_51142 1
Cyanothece_sp._PCC_8801 0
Cyanobacterium_aponinum_PCC_10605 0
Cyanobacterium_stanieri_PCC_7202 0
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1
Cylindrospermum_stagnale_PCC_7417 0
Frankia_sp._EuI1c 1
Streptomyces_albus_J1074 3
Streptomyces_rapamycinicus_NRRL_5491 2
Streptomyces_davawensis_JCM_4913 3
Streptomyces_venezuelae_ATCC_10712 0
Streptomyces_collinus_Tu_365 3
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 3
Saccharothrix_espanaensis_DSM_44229 0
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_orientalis_HCCB10007 0
Actinoplanes_friuliensis_DSM_7358 0
Rhodococcus_erythropolis_CCM2595 0
Nocardia_brasiliensis_ATCC_700358 0
Mycobacterium_kansasii_ATCC_12478 0
Clavibacter_michiganensis_subsp._sepedonicus 0
Actinomyces_graevenitzii_C83_ 1
Chthonomonas_calidirosea_T49 5
Clostridium_thermocellum_DSM_1313 0
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 0
Ruminococcus_champanellensis_18P13 1
Clostridium_acidurici_9a 1
Desulfotomaculum_gibsoniae_DSM_7213 0
Clostridium_difficile_BI1 1
Clostridium_difficile_R20291 1
Clostridium_difficile_CD196 1
Clostridium_autoethanogenum_DSM_10061 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1
Clostridium_botulinum_F_str._230613 1
Clostridium_botulinum_F_str._Langeland 1
Clostridium_botulinum_B1_str._Okra 1
Clostridium_botulinum_Ba4_str._657 1
Clostridium_botulinum_A2_str._Kyoto 1
Clostridium_botulinum_A_str._Hall 1
Clostridium_botulinum_A_str._ATCC_19397 1
Thermobacillus_composti_KWC4 1
Paenibacillus_sp._Y412MC10 1
Paenibacillus_mucilaginosus_KNP414 1
Paenibacillus_mucilaginosus_K02 0
Paenibacillus_larvae_subsp._larvae_DSM_25430 1
Paenibacillus_polymyxa_CR1 1
Paenibacillus_polymyxa_SC2 0
Paenibacillus_polymyxa_E681 1
Bacillus_licheniformis_9945A 0
Bacillus_subtilis_PY79 0
Bacillus_subtilis_XF-1 0
Bacillus_subtilis_QB928 0
Bacillus_subtilis_BSn5 0
Bacillus_subtilis_subsp._subtilis_str._BAB-1 0
Bacillus_subtilis_subsp._subtilis_str._BSP1 0
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 0
Bacillus_subtilis_subsp._subtilis_6051-HGW 0
Bacillus_subtilis_subsp._spizizenii_TU-B-10 0
Bacillus_subtilis_subsp._spizizenii_str._W23 0
Bacillus_subtilis_subsp._natto_BEST195 0
Bacillus_licheniformis_DSM_13_=_ATCC_14580 0
Bacillus_infantis_NRRL_B-14911 1
Bacillus_thuringiensis_MC28 1
Bacillus_thuringiensis_serovar_chinensis_CT-43 1
Bacillus_thuringiensis_YBT-1518 1
Bacillus_thuringiensis_Bt407 1
Bacillus_thuringiensis_serovar_konkukian_str._97-27 1
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 1
Bacillus_cereus_biovar_anthracis_str._CI 1
Bacillus_cereus_AH820 1
Bacillus_cereus_F837/76 1
Bacillus_cereus_E33L 1
Bacillus_anthracis_str._H9401 1
Bacillus_anthracis_str._CDC_684 1
Bacillus_anthracis_str._'Ames_Ancestor' 1
Bacillus_anthracis_str._Sterne 1
Bacillus_anthracis_str._Ames 1
Rhodothermus_marinus_SG0.5JP17-172 0
Echinicola_vietnamensis_DSM_17526 1
Emticicia_oligotrophica_DSM_17448 1
Prevotella_sp._oral_taxon_299_str._F0039 0
Prevotella_dentalis_DSM_3688 1
Porphyromonas_gingivalis_TDC60 0
Bacteroides_xylanisolvens_XB1A 2
Nonlabens_dokdonensis_DSW-6 0
Psychroflexus_torquis_ATCC_700755 2
Riemerella_anatipestifer_RA-CH-2 0
Riemerella_anatipestifer_RA-GD 0
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Singulisphaera_acidiphila_DSM_18658 2
Leptospira_interrogans_serovar_Lai_str._56601 0
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 0
Bdellovibrio_bacteriovorus_str._Tiberius 0
Desulfocapsa_sulfexigens_DSM_10523 0
Lawsonia_intracellularis_N343 0
Desulfovibrio_vulgaris_str._'Miyazaki_F' 0
Desulfovibrio_desulfuricans_ND132 1
Geobacter_sp._M18 0
Sorangium_cellulosum_So0157-2 5
Anaeromyxobacter_sp._K 0
Myxococcus_stipitatus_DSM_14675 3
Burkholderia_pseudomallei_MSHR305 0
Burkholderia_pseudomallei_NCTC_13179 0
Burkholderia_pseudomallei_BPC006 0
Burkholderia_pseudomallei_1026b 0
Burkholderia_pseudomallei_MSHR346 0
Burkholderia_pseudomallei_668 0
Burkholderia_pseudomallei_1710b 0
Burkholderia_pseudomallei_K96243 0
Burkholderia_mallei_NCTC_10229 1
Burkholderia_mallei_ATCC_23344 1
Variovorax_paradoxus_EPS 0
Nitrosomonas_sp._AL212 3
Zymomonas_mobilis_subsp._mobilis_CP4 0
Zymomonas_mobilis_subsp._mobilis_ATCC_10988 0
Zymomonas_mobilis_subsp._mobilis_ZM4 0
Zymomonas_mobilis_subsp._pomaceae_ATCC_29192 0
Leisingera_methylohalidivorans_DSM_14336 0
Octadecabacter_arcticus_238 0
Micavibrio_aeruginosavorus_EPB 0
Wolbachia_endosymbiont_of_Drosophila_melanogaster 1
Wolbachia_endosymbiont_of_Drosophila_simulans_wNo 0
Sinorhizobium_fredii_HH103 0
Sinorhizobium_meliloti_GR4 0
Rhizobium_etli_bv._mimosae_str._Mim1 0
Rhodopseudomonas_palustris_DX-1 0
Bradyrhizobium_sp._BTAi1 1
Bradyrhizobium_oligotrophicum_S58 0
Simiduia_agarivorans_SA1_=_DSM_21679 0
Vibrio_anguillarum_Listonella_anguillarum_M3 0
Vibrio_nigripulchritudo_VibrioScope 0
Vibrio_vulnificus_CMCP6 0
Vibrio_cholerae_LMA3984-4 0
Vibrio_cholerae_M66-2 0
Vibrio_cholerae_O395 0
Vibrio_cholerae_IEC224 0
Vibrio_cholerae_O1_str._2010EL-1786 0
Vibrio_cholerae_MJ-1236 0
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 0
Shewanella_sp._W3-18-1 0
Shewanella_baltica_BA175 0
Shewanella_baltica_OS678 0
Shewanella_baltica_OS223 0
Shewanella_baltica_OS195 0
Shewanella_sp._MR-7 0
Glaciecola_psychrophila_170 0
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 0
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 0
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 0
Alteromonas_macleodii_AltDE1 0
Alteromonas_macleodii_str._'Black_Sea_11' 0
Alcanivorax_dieselolei_B5 0
Thalassolituus_oleivorans_MIL-1 0
Spiribacter_salinus_M19-40 1
Thioalkalivibrio_nitratireducens_DSM_14787 0
Proteus_mirabilis_BB2000 0
Morganella_morganii_subsp._morganii_KT 0
Rahnella_aquatilis_HX2 1
Yersinia_pseudotuberculosis_PB1/+ 0
Yersinia_pseudotuberculosis_YPIII 0
Yersinia_pseudotuberculosis_IP_32953 0
Yersinia_pestis_biovar_Microtus_str._91001 0
Yersinia_pestis_A1122 0
Yersinia_pestis_Z176003 0
Yersinia_pestis_D182038 0
Yersinia_pestis_D106004 0
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 0
Yersinia_pestis_Nepal516 0
Yersinia_pestis_Antiqua 0
Yersinia_pestis_Angola 0
Yersinia_pestis_CO92 0
Yersinia_pestis_KIM10+ 0
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 0
Yersinia_enterocolitica_subsp._palearctica_Y11 0
Serratia_plymuthica_4Rx13 0
Erwinia_pyrifoliae_DSM_12163 0
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 0
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 0
Pseudomonas_syringae_pv._syringae_B728a 0
Pseudomonas_poae_RE*1-1-14 0
Pseudomonas_fluorescens_F113 0
Pseudomonas_fluorescens_A506 0
Pseudomonas_fluorescens_R124 0
Pseudomonas_fluorescens_Pf0-1 0
Pseudomonas_aeruginosa_RP73 0
Pseudomonas_aeruginosa_B136-33 0
Archaeoglobus_sulfaticallidus_PM70-1 0
Thermococcus_litoralis_DSM_5473 0
Halovivax_ruber_XH-70 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Pongo_abelii_69_2   (Sumatran orangutan)   2
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1
Macaca_mulatta_69_1   (Rhesus monkey)   2
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   2
Otolemur_garnettii_69_3   (Small-eared galago)   1
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Rattus_norvegicus_69_3.4   (Norway rat)   2
Mus_musculus_69_38   (House mouse)   2
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1
Cavia_porcellus_69_3   (Domestic guinea pig)   2
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Ochotona_princeps_69   (American pika)   0
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   1
Bos_taurus_69_3.1   (Cattle)   2
Vicugna_pacos_69_1   (Alpaca)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_69_1   (Giant panda)   0
Canis_familiaris_69_3.1   (Dog)   1
Felis_catus_69   (Domestic cat)   2
Equus_caballus_69_2   (Horse)   1
Myotis_lucifugus_69_2.0   (Little brown bat)   1
Pteropus_vampyrus_69_1   (Large flying fox)   1
Sorex_araneus_69_1   (European shrew)   1
Erinaceus_europaeus_69   (Western European hedgehog)   2
Procavia_capensis_69_1   (Cape rock hyrax)   1
Loxodonta_africana_69_3   (African savanna elephant)   2
Echinops_telfairi_69   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   3
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1
Macropus_eugenii_69_1.0   (Tammar wallaby)   2
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   2
Ornithorhynchus_anatinus_69_5   (Platypus)   2
Petromyzon_marinus_69_7.0   (Sea lamprey)   1
Meleagris_gallopavo_69_2   (Turkey)   1
Gallus_gallus_69_2   (Chicken)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   2
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   1
Anolis_carolinensis_69_2.0   (Green anole)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_69_1   (Coelacanth)   0
Gadus_morhua_69_1   (Atlantic cod)   2
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   2
Takifugu_rubripes_69_4   (Torafugu)   3
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   3
Oryzias_latipes_69_1   (Japanese medaka)   2
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   2
Oreochromis_niloticus_69_1.0   (Nile tilapia)   2
Danio_rerio_69_9   (Zebrafish)   3
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_69   (Vase tunicate)   1
Drosophila_melanogaster_69_5   (Fruit fly)   1
Caenorhabditis_elegans_69_215   (Roundworm)   1
Arabidopsis_thaliana_10   (Thale cress)   0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   6
Homo_sapiens__(NCBI_version)   (Human)   1
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   2
Loa_loa_v3.3_(Request)   (Eye worm)   2
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   2
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   1
Encephalitozoon_intestinalis__(endoparasite) 0
Encephalitozoon_cuniculi_(endoparasite) 0
Malus_x_domestica_(Duplicate)   (Apple)   0
Ricinus_communis__(Early_assembly)   (Castor bean)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 2
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   0
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   0
Phoenix_dactylifera__(Early_draft)   (Date palm)   1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1
NCBI_plasmid_sequences_(Plasmids) 11
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 8
Protozoadb_2010_08_(Protozoadb) 27
STRING_v9.0.5_(STRING) 236
Uniprot_2018_03_genome 19242
Protein_Data_Bank_(all_PDB_sequenc) 3
NCBI_2017_08_genome 6805
TargetDB__(Targets) 9

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]