SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 74748 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

74748 - Variable surface antigen VlsE

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Pongo_abelii_76_2   (Sumatran orangutan)   0
Macaca_mulatta_76_1   (Rhesus monkey)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Rattus_norvegicus_76_5.0   (Norway rat)   0
Mus_musculus_76_38   (House mouse)   0
Cavia_porcellus_76_3   (Domestic guinea pig)   0
Ovis_aries_76_3.1   (Sheep)   0
Canis_familiaris_76_3.1   (Dog)   0
Felis_catus_76_6.2   (Domestic cat)   0
Equus_caballus_76_2   (Horse)   0
Erinaceus_europaeus_76   (Western European hedgehog)   0
Procavia_capensis_76_1   (Cape rock hyrax)   0
Loxodonta_africana_76_3   (African savanna elephant)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_76_5   (Platypus)   0
Saccoglossus_kowalevskii_v3.0 0
Petromyzon_marinus_76_7.0   (Sea lamprey)   0
Gallus_gallus_76_4   (Chicken)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_76_2.0   (Green anole)   0
Xenopus_laevis_   (African clawed frog)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   0
Oryzias_latipes_76_1   (Japanese medaka)   0
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Astyanax_mexicanus_76   (Mexican tetra)   0
Danio_rerio_76_9   (Zebrafish)   0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_76   (Vase tunicate)   0
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   0
Crassostrea_gigas_22   (Pacific oyster)   0
Lottia_gigantea_   (Owl limpet)   0
Danaus_plexippus_OGS1.0   (Monarch butterfly)   0
Bombyx_mori_   (Domestic silkworm)   0
Nasonia_vitripennis_   (Jewel wasp)   0
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   0
Camponotus_floridanus_v3.3   (Florida carpenter ant)   0
Drosophila_willistoni_1.3 0
Drosophila_pseudoobscura_2.13 0
Drosophila_persimilis_1.3 0
Drosophila_suzukii 0
Drosophila_yakuba_1.3 0
Drosophila_melanogaster_76_5   (Fruit fly)   0
Drosophila_erecta_1.3 0
Drosophila_virilis_1.2 0
Drosophila_mojavensis_1.3 0
Anopheles_darlingi_22   (American malaria mosquito)   0
Anopheles_gambiae_49_3j   (African malaria mosquito)   0
Tribolium_castaneum_3.0   (Red flour beetle)   0
Strigamia_maritima_22 0
Tetranychus_urticae_   (Two-spotted spider mite)   0
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   0
Pristionchus_pacificus_ 0
Meloidogyne_incognita_   (Southern root-knot nematode)   0
Meloidogyne_hapla_ 0
Onchocerca_volvulus_22 0
Caenorhabditis_japonica_ 0
Caenorhabditis_brenneri_ 0
Caenorhabditis_remanei_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   0
Hymenolepis_microstoma_ 0
Echinococcus_granulosus_ 0
Acropora_digitifera_v1.0 0
Nematostella_vectensis_1.0   (Starlet sea anemone)   0
Hydra_vulgaris 0
Trichoplax_adhaerens_ 0
Proterospongia_sp._ATCC_50818_ 0
Sphaeroforma_arctica_JP610_ 0
Capsaspora_owczarzaki_ATCC_30864_ 0
Phycomyces_blakesleeanus_ 0
Rhizopus_oryzae_RA_99-880_ 0
Mucor_circinelloides_ 0
Malassezia_globosa_CBS_7966_ 0
Sporisorium_reilianum_22 0
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 0
Melampsora_laricis-populina_ 0
Rhodotorula_graminis_WP1_v1.0 0
Sphaerobolus_stellatus_v1.0 0
Serpula_lacrymans_var._lacrymans_S7.9_ 0
Coniophora_puteana 0
Coprinopsis_cinerea_okayama7_130_v3 0
Pleurotus_ostreatus_   (Oyster mushroom)   0
Amanita_thiersii_Skay4041_v1.0 0
Galerina_marginata_v1.0 0
Hebeloma_cylindrosporum_h7_v2.0 0
Laccaria_bicolor_S238N-H82_ 0
Agaricus_bisporus_var._bisporus_ 0
Heterobasidion_annosum_ 0
Gloeophyllum_trabeumv1.0 0
Sebacina_vermifera_MAFF_305830_v1.0 0
Fomitiporia_mediterranea_v1.0 0
Wolfiporia_cocos_MD-104_SS10__v1.0 0
Fomitopsis_pinicolav1.0 0
Fomitopsis_pinicola_FP-58527_SS1_v3.0 0
Dichomitus_squalens 0
Tremella_mesenterica_   (Witches' butter)   0
Apiospora_montagnei_NRRL_25634_v1.0 0
Magnaporthe_poae_ATCC_64411_22 0
Podospora_anserina_ 0
Sporotrichum_thermophile_ATCC_42464_ 0
Neurospora_tetrasperma_ 0
Neurospora_crassa_OR74A_ 0
Verticillium_dahliae_VdLs.17_ 0
Glomerella_graminicola_22 0
Nectria_haematococca_mpVI_ 0
Fusarium_oxysporum_f._sp._lycopersici_4286_ 0
Fusarium_verticillioides_7600_ 0
Trichoderma_asperellum_CBS_433.97_v1.0 0
Trichoderma_atroviride_ 0
Trichoderma_reesei_1.2 0
Trichoderma_virens_Gv29-8_ 0
Trichoderma_longibrachiatum_ATCC_18648_v1.0 0
Trichoderma_harzianum_CBS_226.95_v1.0 0
Amorphotheca_resinae_v1.0   (Creosote fungus)   0
Botrytis_cinerea_B05.10_ 0
Sclerotinia_sclerotiorum_ 0
Cochliobolus_victoriae_FI3_v1.0 0
Cochliobolus_carbonum_26-R-13_v1.0 0
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   0
Stagonospora_nodorum_ 0
Zasmidium_cellare_ATCC_36951_v1.0 0
Dothistroma_septosporum 0
Septoria_musiva_v1.0 0
Mycosphaerella_fijiensis_CIRAD86_ 0
Paracoccidioides_brasiliensis_Pb18_ 0
Coccidioides_posadasii_RMSCC_3488_ 0
Coccidioides_immitis_RS_ 0
Ajellomyces_dermatitidis_SLH14081_ 0
Microsporum_canis_CBS_113480_ 0
Trichophyton_equinum_CBS_127.97_ 0
Trichophyton_tonsurans_CBS_112818_ 0
Aspergillus_zonatus_v1.0 0
Penicillium_chrysogenum_Wisconsin_54-1255_ 0
Aspergillus_brasiliensis_v1.0 0
Aspergillus_sydowii_v1.0 0
Aspergillus_tubingensis_v1.0 0
Aspergillus_wentii_v1.0 0
Aspergillus_oryzae_RIB40_ 0
Aspergillus_niger_22 0
Aspergillus_niger_ATCC_1015_ 0
Aspergillus_flavus_NRRL3357_ 0
Penicillium_marneffei_ATCC_18224_ 0
Tuber_melanosporum_Mel28_22 0
Tuber_melanosporum_Vittad_   (Perigord truffle)   0
Pichia_membranifaciensv1.0 0
Candida_tanzawaensis_NRRL_Y-17324__v1.0 0
Candida_dubliniensis_CD36_ 0
Candida_albicans_SC5314 0
Debaromyces_hansenii 0
Yarrowia_lipolytica_CLIB122 0
Ashbya_gossypii_ATCC_10895_ 0
Catenaria_anguillulae_PL171_v1.0 0
Spizellomyces_punctatus_DAOM_BR117_ 0
Dictyostelium_discoideum 0
Dictyostelium_purpureum_ 0
Entamoeba_invadens_1.2 0
Entamoeba_histolytica_1 0
Selaginella_moellendorffii_ 0
Pinus_taeda   (Loblolly pine)   0
Picea_abies   (Norway spruce)   0
Eucalyptus_grandis_v201   (Rose gum)   0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Gossypium_raimondii_v221 0
Citrus_clementina_v165 0
Citrus_sinensis_v154   (Sweet orange)   0
Thellungiella_halophila_v173 0
Capsella_rubella_v183 0
Arabidopsis_lyrata_   (Lyrate rockcress)   0
Arabidopsis_thaliana_10   (Thale cress)   0
Carica_papaya_   (Papaya)   0
Glycine_max_v109   (Soybean)   0
Cucumis_sativus_v122   (Cucumber)   0
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   0
Prunus_persica_v139   (Peach)   0
Manihot_esculenta_v147   (Cassava)   0
Populus_trichocarpa_v156   (Black cottonwood)   0
Vitis_vinifera_   (Wine grape)   0
Solanum_tuberosum_   (Potato)   0
Triticum_urartu_22 0
Triticum_aestivum_22   (Bread wheat)   0
Aegilops_tauschii_22 0
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_barthii_22   (African wild rice)   0
Oryza_meridionalis_22 0
Oryza_glumaepatula_22 0
Oryza_glaberrima   (African rice)   0
Oryza_punctata_22 0
Oryza_nivara_22 0
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   0
Oryza_sativa_v193   (Rice)   0
Panicum_virgatum_v202   (Switchgrass)   0
Setaria_italica_v164   (Foxtail millet)   0
Zea_mays_subsp._mays_   (Maize)   0
Zea_mays_v181   (Maize)   0
Sorghum_bicolor_   (Sorghum)   0
Musa_balbisiana   (Balbis banana)   0
Musa_acuminata_22   (Wild Malaysian banana)   0
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Chlorella_vulgaris_ 0
Ostreococcus_sp._RCC809_ 0
Ostreococcus_lucimarinus_CCE9901_ 0
Micromonas_pusilla_CCMP1545_v3.0 0
Thecamonas_trahens_ATCC_50062_ 0
Bigelowiella_natans_CCMP2755_22 0
Giardia_lamblia_2.3 0
Cyanophora_paradoxa_ 0
Leishmania_mexicana_2.4 0
Leishmania_major_strain_Friedlin_ 0
Leishmania_infantum_JPCM5_2.4 0
Trypanosoma_vivax_ 0
Trypanosoma_congolense_2.4 0
Trypanosoma_brucei_gambiense_v4.1 0
Trypanosoma_brucei_TREU927_v4.1 0
Aureococcus_anophagefferens_ 0
Pythium_arrhenomanes_ATCC_12531_22 0
Pythium_ultimum_v1.7-2 0
Pythium_irregulare_DAOM_BR486_22 0
Phytophthora_ramorum_1.1   (Sudden oak death agent)   0
Phytophthora_sojae_1.1 0
Phytophthora_infestans_T30-4_ 0
Hyaloperonospora_arabidopsidis_22 0
Phaeodactylum_tricornutumCCAP_1055/1 0
Fragilariopsis_cylindrus 0
Thalassiosira_pseudonana_CCMP1335 0
Perkinsus_marinus_ATCC_50983_ 0
Paramecium_tetraurelia_ 0
Tetrahymena_thermophila_SB210_1_ 0
Ichthyophthirius_multifiliis_strain_G5_ 0
Neospora_caninum 0
Toxoplasma_gondii_ME49 0
Babesia_bovis_T2Bo_ 0
Theileria_parva__ 0
Theileria_annulata 0
Plasmodium_vivax_SaI-1_7.0 0
Plasmodium_knowlesi_strain_H_ 0
Plasmodium_chabaudi_ 0
Symbiodinium_minutum_clade_B1_v1.2 0
Trichomonas_vaginalis_ 0
Guillardia_theta_CCMP2712_v1.0_ 0
Emiliania_huxleyi_CCMP1516_ 0
Acaryochloris_marina_MBIC11017 0
Trichodesmium_erythraeum_IMS101 0
Nostoc_sp._PCC_7524 0
Mycoplasma_haemocanis_str._Illinois 0
Olsenella_uli_DSM_7084 0
Ilumatobacter_coccineus 0
Thermobispora_bispora_DSM_43833 0
Stackebrandtia_nassauensis_DSM_44728 0
Frankia_symbiont_of_Datisca_glomerata 0
Kitasatospora_setae_KM-6054 0
Streptomyces_avermitilis_MA-4680 0
Saccharomonospora_viridis_DSM_43017 0
Verrucosispora_maris_AB-18-032 0
Micromonospora_sp._L5 0
Segniliparus_rotundus_DSM_44985 0
Tsukamurella_paurometabola_DSM_20162 0
Gordonia_sp._KTR9 0
Gordonia_bronchialis_DSM_43247 0
Nocardia_farcinica_IFM_10152 0
Mycobacterium_africanum_GM041182 0
Mycobacterium_tuberculosis_KZN_1435 0
Mycobacterium_tuberculosis 0
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 0
Mycobacterium_marinum_M 0
Corynebacterium_resistens_DSM_45100 0
Bifidobacterium_animalis_subsp._lactis_Bl-04 0
Sphaerobacter_thermophilus_DSM_20745 0
Herpetosiphon_aurantiacus_DSM_785 0
Roseiflexus_sp._RS-1 0
Chloroflexus_aggregans_DSM_9485 0
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 0
Ruminococcus_albus_7 0
Oscillibacter_valericigenes_Sjm18-20 0
Desulfotomaculum_reducens_MI-1 0
Eubacterium_limosum_KIST612 0
Clostridium_difficile_630 0
Eubacterium_rectale_ATCC_33656 0
Butyrivibrio_proteoclasticus_B316 0
Clostridium_beijerinckii_NCIMB_8052 0
Clostridium_cellulovorans_743B 0
Clostridium_botulinum_A_str._ATCC_3502 0
Caldicellulosiruptor_obsidiansis_OB47 0
Caldicellulosiruptor_bescii_DSM_6725 0
Thermoanaerobacter_pseudethanolicus_ATCC_33223 0
Thermoanaerobacter_sp._X514 0
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 0
Enterococcus_faecium_Aus0004 0
Lactobacillus_fermentum_IFO_3956 0
Lactobacillus_brevis_ATCC_367 0
Lactobacillus_acidophilus_30SC 0
Streptococcus_parasanguinis_ATCC_15912 0
Paenibacillus_terrae_HPL-003 0
Paenibacillus_mucilaginosus_3016 0
Paenibacillus_polymyxa_M1 0
Geobacillus_thermoglucosidasius_C56-YS93 0
Bacillus_sp._JS 0
Bacillus_subtilis_subsp._subtilis_str._168 0
Bacillus_licheniformis_DSM_13_=_ATCC_14580 0
Bacillus_pseudofirmus_OF4 0
Bacillus_clausii_KSM-K16 0
Flexibacter_litoralis_DSM_6794 0
Porphyromonas_gingivalis_ATCC_33277 0
Bacteroides_helcogenes_P_36-108 0
Bacteroides_thetaiotaomicron_VPI-5482 0
Fluviicola_taffensis_DSM_16823 0
Owenweeksia_hongkongensis_DSM_17368 0
Croceibacter_atlanticus_HTCC2559 0
Polaribacter_sp._MED152 0
Ornithobacterium_rhinotracheale_DSM_15997 0
Capnocytophaga_ochracea_DSM_7271 0
Simkania_negevensis_Z 0
Planctomyces_brasiliensis_DSM_5305 0
Opitutus_terrae_PB90-1 0
Turneriella_parva_DSM_21527 0
Brachyspira_hyodysenteriae_WA1 0
Borrelia_afzelii_PKo 2
Borrelia_burgdorferi_B31 1
Borrelia_recurrentis_A1 16
Borrelia_duttonii_Ly 64
Borrelia_crocidurae_str._Achema 151
Borrelia_hermsii_DAH 18
Treponema_succinifaciens_DSM_2489 0
Denitrovibrio_acetiphilus_DSM_12809 0
Fervidobacterium_pennivorans_DSM_9078 0
Sulfurihydrogenibium_sp._YO3AOP1 0
Elusimicrobium_minutum_Pei191 0
Candidatus_Solibacter_usitatus_Ellin6076 0
Granulicella_mallensis_MP5ACTX8 0
Leptotrichia_buccalis_C-1013-b 0
Nautilia_profundicola_AmH 0
Campylobacter_curvus_525.92 0
Campylobacter_fetus_subsp._fetus_82-40 0
Sulfurimonas_autotrophica_DSM_16294 0
Helicobacter_felis_ATCC_49179 0
Desulfarculus_baarsii_DSM_2075 0
Desulfobacca_acetoxidans_DSM_11109 0
Desulfurivibrio_alkaliphilus_AHT2 0
Desulfovibrio_salexigens_DSM_2638 0
Dechloromonas_aromatica_RCB 0
Azoarcus_sp._KH32C 0
Chromobacterium_violaceum_ATCC_12472 0
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 0
Methylibium_petroleiphilum_PM1 0
Rubrivivax_gelatinosus_IL144 0
Ralstonia_pickettii_12D 0
Ralstonia_solanacearum_CFBP2957 0
Burkholderia_thailandensis_E264 0
Burkholderia_pseudomallei_1106a 0
Burkholderia_mallei_SAVP1 0
Burkholderia_multivorans_ATCC_17616 0
Acidovorax_citrulli_AAC00-1 0
Acidovorax_avenae_subsp._avenae_ATCC_19860 0
Comamonas_testosteroni_CNB-2 0
Pusillimonas_sp._T7-7 0
Bordetella_pertussis_Tohama_I 0
Bordetella_parapertussis_12822 0
Bordetella_bronchiseptica_RB50 0
Achromobacter_xylosoxidans_A8 0
Achromobacter_xylosoxidans 0
Erythrobacter_litoralis_HTCC2594 0
Novosphingobium_sp._PP1Y 0
Sphingomonas_sp._MM-1 0
Ruegeria_pomeroyi_DSS-3 0
Roseobacter_denitrificans_OCh_114 0
Rhodobacter_sphaeroides_ATCC_17029 0
Paracoccus_denitrificans_PD1222 0
Azospirillum_lipoferum_4B 0
Azospirillum_brasilense_Sp245 0
Gluconobacter_oxydans_621H 0
Ehrlichia_canis_str._Jake 0
Ehrlichia_ruminantium_str._Gardel 0
Anaplasma_marginale_str._Florida 0
Rickettsia_montanensis_str._OSU_85-930 0
Rickettsia_rickettsii_str._'Sheila_Smith' 0
Methylobacterium_chloromethanicum_CM4 0
Methylobacterium_extorquens_AM1 0
Methylobacterium_populi_BJ001 0
Methylobacterium_radiotolerans_JCM_2831 0
Brucella_microti_CCM_4915 0
Brucella_pinnipedialis_B2/94 0
Brucella_canis_ATCC_23365 0
Brucella_suis_ATCC_23445 0
Brucella_melitensis_ATCC_23457 0
Brucella_ovis_ATCC_25840 0
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 0
Rhizobium_etli_CIAT_652 0
Bradyrhizobium_japonicum_USDA_110 0
Shewanella_woodyi_ATCC_51908 0
Shewanella_amazonensis_SB2B 0
Pseudoalteromonas_sp._SM9913 0
Pseudoalteromonas_atlantica_T6c 0
Pseudoalteromonas_haloplanktis_TAC125 0
Marinobacter_adhaerens_HP15 0
Hahella_chejuensis_KCTC_2396 0
Dichelobacter_nodosus_VCS1703A 0
Halothiobacillus_neapolitanus_c2 0
Legionella_longbeachae_NSW150 0
Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 0
Klebsiella_oxytoca_E718 0
Pseudomonas_sp._TKP 0
Pseudomonas_sp._UW4 0
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 0
Pseudomonas_entomophila_L48 0
Pseudomonas_syringae_pv._tomato_str._DC3000 0
Pseudomonas_putida_F1 0
Pseudomonas_protegens_Pf-5 0
Pseudomonas_fluorescens_SBW25 0
Pseudomonas_sp._VLB120 0
Sulfolobus_tokodaii_str._7 0
Pyrobaculum_sp._1860 0
Archaeoglobus_profundus_DSM_5631 0
Halorhabdus_utahensis_DSM_12940 0
Halalkalicoccus_jeotgali_B3 0
Halobacterium_salinarum_R1 0
Halobacterium_sp._NRC-1 0
Methanocaldococcus_fervens_AG86 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   0
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   0
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0
Paracoccidioides_brasiliensis_Pb03_ 0
Coccidioides_posadasii_str._Silveira_ 0
Coccidioides_immitis_RMSCC_2394_ 0
Coccidioides_immitis_H538.4_ 0
Ajellomyces_dermatitidis_ER-3_ 0
Candida_albicans_WO-1_ 0
Saccharomyces_cerevisiae_FostersO 0
Saccharomyces_cerevisiae_Vin13 0
Batrachochytrium_dendrobatidis_JEL423_ 0
Batrachochytrium_dendrobatidis_JAM81_ 0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0
Hordeum_vulgare_22   (Domesticated barley)   0
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Trypanosoma_brucei_Lister_427_v4.1 0
Neospora_caninum_Nc-Liverpool_6.2 0
Plasmodium_falciparum_Dd2_ 0
Chroococcidiopsis_thermalis_PCC_7203 0
Synechococcus_sp._PCC_7002 0
Prochlorococcus_marinus_str._MIT_9301 0
Prochlorococcus_marinus_str._AS9601 0
Cyanobacterium_aponinum_PCC_10605 0
Stanieria_cyanosphaera_PCC_7437 0
Mycoplasma_parvum_str._Indiana 0
Mycoplasma_ovis_str._Michigan 0
Mycoplasma_haemofelis_str._Langford_1 0
Adlercreutzia_equolifaciens_DSM_19450 0
Streptomyces_venezuelae_ATCC_10712 0
Propionibacterium_acidipropionici_ATCC_4875 0
Mycobacterium_sp._MOTT36Y 0
Mycobacterium_abscessus_subsp._bolletii_50594 0
Mycobacterium_yongonense_05-1390 0
Mycobacterium_intracellulare_MOTT-64 0
Mycobacterium_indicus_pranii_MTCC_9506 0
Mycobacterium_tuberculosis_CAS/NITR204 0
Mycobacterium_tuberculosis_str._Beijing/NITR203 0
Mycobacterium_tuberculosis_UT205 0
Mycobacterium_tuberculosis_RGTB423 0
Mycobacterium_tuberculosis_RGTB327 0
Mycobacterium_tuberculosis_CTRI-2 0
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 0
Mycobacterium_tuberculosis_KZN_605 0
Mycobacterium_tuberculosis_KZN_4207 0
Mycobacterium_tuberculosis_CCDC5180 0
Mycobacterium_tuberculosis_CCDC5079 0
Mycobacterium_tuberculosis_CCDC5079 0
Mycobacterium_tuberculosis_H37Ra 0
Mycobacterium_tuberculosis_str._Haarlem 0
Mycobacterium_tuberculosis_F11 0
Mycobacterium_tuberculosis_H37Rv 0
Mycobacterium_tuberculosis_CDC1551 0
Mycobacterium_bovis_AF2122/97 0
Mycobacterium_bovis_BCG_str._Korea_1168P 0
Mycobacterium_bovis_BCG_str._Mexico 0
Mycobacterium_bovis_BCG_str._Tokyo_172 0
Mycobacterium_kansasii_ATCC_12478 0
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 0
Corynebacterium_terpenotabidum_Y-11 0
Corynebacterium_argentoratense_DSM_44202 0
Bifidobacterium_longum_subsp._longum_JCM_1217 0
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 0
Bifidobacterium_animalis_subsp._lactis_Bl12 0
Bifidobacterium_animalis_subsp._lactis_B420 0
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 0
Bifidobacterium_animalis_subsp._lactis_BLC1 0
Bifidobacterium_animalis_subsp._lactis_Bi-07 0
Bifidobacterium_animalis_subsp._lactis_V9 0
Bifidobacterium_animalis_subsp._lactis_DSM_10140 0
Bifidobacterium_animalis_subsp._lactis_AD011 0
Bifidobacterium_bifidum_PRL2010 0
Actinomyces_viscosus_C505 0
Ruminococcus_champanellensis_18P13 0
Clostridium_acidurici_9a 0
Clostridium_saccharobutylicum_DSM_13864 0
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 0
Clostridium_botulinum_H04402_065 0
Clostridium_botulinum_F_str._230613 0
Clostridium_botulinum_F_str._Langeland 0
Clostridium_botulinum_B1_str._Okra 0
Clostridium_botulinum_Ba4_str._657 0
Clostridium_botulinum_A2_str._Kyoto 0
Clostridium_botulinum_A3_str._Loch_Maree 0
Clostridium_botulinum_A_str._Hall 0
Clostridium_botulinum_A_str._ATCC_19397 0
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 0
Thermoanaerobacter_sp._X513 0
Carnobacterium_maltaromaticum_LMA28 0
Enterococcus_faecium_Aus0085 0
Enterococcus_faecium_NRRL_B-2354 0
Enterococcus_faecium_DO 0
Leuconostoc_carnosum_JB16 0
Lactobacillus_rhamnosus_GG 0
Lactobacillus_rhamnosus_GG 0
Lactobacillus_fermentum_F-6 0
Lactobacillus_amylovorus_GRL_1112 0
Lactobacillus_brevis_KB290 0
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 0
Lactococcus_lactis_subsp._lactis_Il1403 0
Lactococcus_lactis_subsp._cremoris_A76 0
Streptococcus_iniae_SF1 0
Streptococcus_pyogenes_MGAS6180 0
Streptococcus_pyogenes_MGAS8232 0
Streptococcus_pyogenes_MGAS10394 0
Streptococcus_pneumoniae_SPNA45 0
Streptococcus_pneumoniae_JJA 0
Streptococcus_pneumoniae_670-6B 0
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_mucilaginosus_K02 0
Paenibacillus_polymyxa_CR1 0
Paenibacillus_polymyxa_SC2 0
Geobacillus_sp._Y4.1MC1 0
Bacillus_subtilis_PY79 0
Bacillus_subtilis_subsp._subtilis_6051-HGW 0
Bacillus_licheniformis_DSM_13_=_ATCC_14580 0
Prevotella_dentalis_DSM_3688 0
Bacteroides_fragilis_638R 0
Blattabacterium_sp._(Blaberus_giganteus) 0
Borrelia_valaisiana_VS116 2
Borrelia_afzelii_PKo 2
Borrelia_burgdorferi_JD1 2
Campylobacter_jejuni_subsp._jejuni_81-176 0
Helicobacter_cetorum_MIT_99-5656 0
Helicobacter_pylori_HUP-B14 0
Helicobacter_pylori_F32 0
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 0
Desulfovibrio_desulfuricans_ND132 0
Anaeromyxobacter_sp._K 0
Ralstonia_pickettii_12J 0
Ralstonia_solanacearum_FQY_4 0
Ralstonia_solanacearum_Po82 0
Ralstonia_solanacearum_PSI07 0
Ralstonia_solanacearum_CMR15 0
Ralstonia_solanacearum_GMI1000 0
Burkholderia_sp._KJ006 0
Burkholderia_thailandensis_MSMB121 0
Burkholderia_pseudomallei_MSHR305 0
Burkholderia_pseudomallei_NCTC_13179 0
Burkholderia_pseudomallei_BPC006 0
Burkholderia_pseudomallei_1026b 0
Burkholderia_pseudomallei_MSHR346 0
Burkholderia_pseudomallei_668 0
Burkholderia_pseudomallei_1710b 0
Burkholderia_pseudomallei_K96243 0
Burkholderia_mallei_NCTC_10229 0
Burkholderia_mallei_NCTC_10247 0
Burkholderia_ambifaria_MC40-6 0
Burkholderia_multivorans_ATCC_17616 0
Burkholderia_cepacia_GG4 0
Bordetella_pertussis_CS 0
Bordetella_parapertussis_18323 0
Bordetella_parapertussis_Bpp5 0
Bordetella_bronchiseptica_MO149 0
Bordetella_bronchiseptica_253 0
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 0
Micavibrio_aeruginosavorus_EPB 0
Wolbachia_endosymbiont_of_Onchocerca_ochengi_str._Adamawa_Cameroon 0
Ehrlichia_ruminantium_str._Welgevonden 0
Ehrlichia_ruminantium_str._Welgevonden 0
Anaplasma_marginale_str._Dawn 0
Anaplasma_marginale_str._St._Maries 0
Orientia_tsutsugamushi_str._Ikeda 0
Rickettsia_rickettsii_str._Arizona 0
Rickettsia_rickettsii_str._Hauke 0
Rickettsia_rickettsii_str._Colombia 0
Rickettsia_rickettsii_str._Hino 0
Brucella_ceti_TE10759-12 0
Brucella_ceti_TE28753-12 0
Brucella_canis_HSK_A52141 0
Brucella_suis_VBI22 0
Brucella_suis_1330 0
Brucella_suis_1330 0
Brucella_melitensis_NI 0
Brucella_melitensis_M5-90 0
Brucella_melitensis_M28 0
Brucella_melitensis_bv._1_str._16M 0
Sinorhizobium_fredii_HH103 0
Rhizobium_etli_CFN_42 0
Rhizobium_etli_bv._mimosae_str._Mim1 0
Bradyrhizobium_japonicum_USDA_6 0
Mannheimia_haemolytica_USMARC_2286 0
Mannheimia_haemolytica_M42548 0
Mannheimia_haemolytica_D174 0
Mannheimia_haemolytica_D153 0
Mannheimia_haemolytica_USDA-ARS-USMARC-183 0
Mannheimia_haemolytica_USDA-ARS-USMARC-185 0
Haemophilus_influenzae_R2866 0
Yersinia_pseudotuberculosis_PB1/+ 0
Yersinia_pseudotuberculosis_YPIII 0
Yersinia_pseudotuberculosis_IP_32953 0
Serratia_plymuthica_4Rx13 0
Serratia_marcescens_FGI94 0
Serratia_marcescens_WW4 0
Serratia_liquefaciens_ATCC_27592 0
Cronobacter_sakazakii_CMCC_45402 0
Shigella_sonnei_53G 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 0
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 0
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 0
Enterobacter_aerogenes_EA1509E 0
Escherichia_coli_E._coli_PMV-1 0
Escherichia_coli_LY180 0
Escherichia_coli_APEC_O78 0
Escherichia_coli_NA114 0
Escherichia_coli_UM146 0
Escherichia_coli_IHE3034 0
Escherichia_coli_KO11FL 0
Escherichia_coli_KO11FL 0
Escherichia_coli_S88 0
Escherichia_coli_W 0
Escherichia_coli_W 0
Escherichia_coli_SMS-3-5 0
Escherichia_coli_APEC_O1 0
Escherichia_coli_UTI89 0
Escherichia_coli_536 0
Escherichia_coli_O157:H7_str._TW14359 0
Escherichia_coli_O157:H7_str._EC4115 0
Pseudomonas_syringae_pv._phaseolicola_1448A 0
Pseudomonas_syringae_pv._syringae_B728a 0
Pseudomonas_stutzeri_DSM_10701 0
Pseudomonas_monteilii_SB3101 0
Pseudomonas_monteilii_SB3078 0
Pseudomonas_putida_H8234 0
Pseudomonas_putida_HB3267 0
Pseudomonas_putida_NBRC_14164 0
Pseudomonas_putida_DOT-T1E 0
Pseudomonas_putida_S16 0
Pseudomonas_putida_BIRD-1 0
Pseudomonas_putida_W619 0
Pseudomonas_putida_ND6 0
Pseudomonas_putida_KT2440 0
Pseudomonas_putida_GB-1 0
Pseudomonas_protegens_CHA0 0
Pseudomonas_poae_RE*1-1-14 0
Pseudomonas_fluorescens_F113 0
Pseudomonas_fluorescens_A506 0
Pseudomonas_fluorescens_R124 0
Pseudomonas_fluorescens_Pf0-1 0
Pseudomonas_mendocina_NK-01 0
Caldisphaera_lagunensis_DSM_15908 0
Methanomethylovorans_hollandica_DSM_15978 0
Methanolobus_psychrophilus_R15 0
Ferroplasma_acidarmanus_fer1 0
Natronococcus_occultus_SP4 0
Natronomonas_moolapensis_8.8.11 0

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Longest transcript per gene
Genome     Number
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Pongo_abelii_69_2   (Sumatran orangutan)   0
Macaca_mulatta_69_1   (Rhesus monkey)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Rattus_norvegicus_69_3.4   (Norway rat)   0
Cavia_porcellus_69_3   (Domestic guinea pig)   0
Canis_familiaris_69_3.1   (Dog)   0
Felis_catus_69   (Domestic cat)   0
Equus_caballus_69_2   (Horse)   0
Erinaceus_europaeus_69   (Western European hedgehog)   0
Procavia_capensis_69_1   (Cape rock hyrax)   0
Loxodonta_africana_69_3   (African savanna elephant)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_69_5   (Platypus)   0
Petromyzon_marinus_69_7.0   (Sea lamprey)   0
Gallus_gallus_69_2   (Chicken)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_69_2.0   (Green anole)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   0
Oryzias_latipes_69_1   (Japanese medaka)   0
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0
Danio_rerio_69_9   (Zebrafish)   0
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_69   (Vase tunicate)   0
Caenorhabditis_elegans_69_215   (Roundworm)   0
Arabidopsis_thaliana_10   (Thale cress)   0

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Homo_sapiens__(NCBI_version)   (Human)   0
Loa_loa_v3.3_(Request)   (Eye worm)   0
Lotus_japonicus__(Early_assembly) 0
Malus_x_domestica_(Duplicate)   (Apple)   0
Ricinus_communis__(Early_assembly)   (Castor bean)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 0
NCBI_plasmid_sequences_(Plasmids) 298
Uniprot_2018_03_genome 2811
UniProt__viral_sequences_(Viral) 0
NCBI_viral_sequences_(Viral) 0
Protein_Data_Bank_(all_PDB_sequenc) 4
TargetDB__(Targets) 0
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 8
Protozoadb_2010_08_(Protozoadb) 0
STRING_v9.0.5_(STRING) 80
PDB_chains_(SCOP_1.75)_(PDB) 1
NCBI_2017_08_genome 1236

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