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Domain combinations for 75005,75005,75005 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

75005 - Arabinanase/levansucrase/invertase
75005 - Arabinanase/levansucrase/invertase
75005 - Arabinanase/levansucrase/invertase

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Apiospora_montagnei_NRRL_25634_v1.0 1
Leptosphaeria_maculans_22 1
Mycosphaerella_graminicola_IPO323_ 0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Gossypium_raimondii_v221 0
Musa_balbisiana   (Balbis banana)   0
Musa_acuminata_22   (Wild Malaysian banana)   1
Amborella_trichopoda_22 0
Volvox_carteri_f._nagariensis_ 1
Volvox_carteri_v199 1
Ectocarpus_siliculosus 1
Streptomyces_bingchenggensis_BCW-1 1
Streptomyces_avermitilis_MA-4680 1
Streptomyces_scabiei_87.22 1
Roseiflexus_sp._RS-1 0
Roseiflexus_castenholzii_DSM_13941 0
Chloroflexus_sp._Y-400-fl 0
Chloroflexus_aggregans_DSM_9485 0
Chloroflexus_aurantiacus_J-10-fl 0
Bacteroides_salanitronis_DSM_18170 1

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Strains
Genome     Number
Streptomyces_davawensis_JCM_4913 1
Prevotella_dentalis_DSM_3688 1

Others
Genome     Number
Protein_Data_Bank_(all_PDB_sequenc) 0
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 456
NCBI_2017_08_genome 214

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.