SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > SCOP hierarchy > Domain combination - 81296,51445,_gap_

Domain combinations for 81296,51445,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

81296 - E set domains
51445 - (Trans)glycosidases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

Jump to [ Top of page · Domain combinations in individual genomes ]

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Sorex_araneus_76_1   (European shrew)   0
Gallus_gallus_76_4   (Chicken)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_76   (Vase tunicate)   0
Monosiga_brevicollis_ 1
Sphaeroforma_arctica_JP610_ 0
Coprinopsis_cinerea_okayama7_130_v3 0
Laccaria_bicolor_S238N-H82_ 0
Daldinia_eschscholzii_EC12_v1.0 0
Apiospora_montagnei_NRRL_25634_v1.0 0
Magnaporthe_poae_ATCC_64411_22 0
Sporotrichum_thermophile_ATCC_42464_ 0
Neurospora_tetrasperma_ 0
Neurospora_discreta_FGSC_8579_ 0
Neurospora_crassa_OR74A_ 0
Cryphonectria_parasitica_   (Chestnut blight fungus)   0
Verticillium_albo-atrum_VaMs.102_ 0
Verticillium_dahliae_VdLs.17_ 0
Acremonium_alcalophilumv_1.0 0
Glomerella_graminicola_22 0
Trichoderma_atroviride_ 0
Cochliobolus_miyabeanus_ATCC_44560_v1.0 0
Cochliobolus_victoriae_FI3_v1.0 0
Cochliobolus_carbonum_26-R-13_v1.0 0
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   0
Alternaria_brassicicola_ 0
Cochliobolus_lunatus_m118_v2.0 0
Pyrenophora_teres_f._teres_22 0
Pyrenophora_tritici-repentis_ 0
Aspergillus_wentii_v1.0 0
Aspergillus_oryzae_RIB40_ 0
Aspergillus_clavatus_NRRL_1_ 0
Penicillium_marneffei_ATCC_18224_ 0
Spizellomyces_punctatus_DAOM_BR117_ 1
Selaginella_moellendorffii_ 0
Eucalyptus_grandis_v201   (Rose gum)   1
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Gossypium_raimondii_v221 0
Citrus_clementina_v165 0
Citrus_sinensis_v154   (Sweet orange)   0
Thellungiella_halophila_v173 0
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   0
Capsella_rubella_v183 0
Arabidopsis_lyrata_   (Lyrate rockcress)   0
Arabidopsis_thaliana_10   (Thale cress)   0
Medicago_truncatula_   (Barrel medic)   0
Phaseolus_vulgaris_v186   (French bean)   0
Glycine_max_v109   (Soybean)   0
Cucumis_sativus_v122   (Cucumber)   0
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   0
Prunus_persica_v139   (Peach)   0
Linum_usitatissimum_v200   (Flax)   0
Populus_trichocarpa_v156   (Black cottonwood)   0
Vitis_vinifera_   (Wine grape)   0
Mimulus_guttatus_v140   (Spotted monkey flower)   0
Solanum_lycopersicum_v.2.3   (Tomato)   0
Actinidia_chinensis_Hongyang_ 0
Aquilegia_coerulea_v195 0
Triticum_urartu_22 0
Triticum_aestivum_22   (Bread wheat)   0
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_barthii_22   (African wild rice)   0
Oryza_glumaepatula_22 0
Oryza_glaberrima   (African rice)   0
Oryza_punctata_22 0
Oryza_nivara_22 0
Oryza_brachyantha_22   (Malo sina)   0
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   0
Oryza_sativa_v193   (Rice)   0
Zea_mays_subsp._mays_   (Maize)   0
Zea_mays_v181   (Maize)   0
Sorghum_bicolor_   (Sorghum)   0
Musa_acuminata_22   (Wild Malaysian banana)   0
Amborella_trichopoda_22 0
Physcomitrella_patens 0
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Asterochloris_sp._Cgr/DA1pho_v1.0 0
Chlorella_vulgaris_ 0
Volvox_carteri_f._nagariensis_ 0
Ostreococcus_sp._RCC809_ 0
Ostreococcus_lucimarinus_CCE9901_ 0
Ostreococcus_tauri_ 0
Bathycoccus_prasinos_ 0
Micromonas_sp._RCC299_ 0
Micromonas_pusilla_CCMP1545_v3.0 0
Cyanidioschyzon_merolae_strain_10D_22 0
Cyanidioschyzon_merolae 0
Cryptosporidium_hominis 0
Cryptosporidium_muris 1
Cryptosporidium_parvum_Iowa_II 0
Symbiodinium_minutum_clade_B1_v1.2 2
Guillardia_theta_CCMP2712_v1.0_ 1
Emiliania_huxleyi_CCMP1516_ 0
Thermobaculum_terrenum_ATCC_BAA-798 0
Leptolyngbya_sp._PCC_7376 0
Pseudanabaena_sp._PCC_7367 0
Acaryochloris_marina_MBIC11017 0
Synechocystis_sp._PCC_6803 0
Thermosynechococcus_sp._NK55 0
Thermosynechococcus_elongatus_BP-1 0
Synechococcus_sp._PCC_7502 0
Synechococcus_sp._PCC_6312 0
Synechococcus_sp._CC9311 0
Synechococcus_elongatus_PCC_7942 0
Prochlorococcus_marinus_str._MIT_9515 0
Microcoleus_sp._PCC_7113 1
Trichodesmium_erythraeum_IMS101 0
Geitlerinema_sp._PCC_7407 1
Cyanothece_sp._PCC_8802 1
Gloeocapsa_sp._PCC_7428 0
Halothece_sp._PCC_7418 0
Microcystis_aeruginosa_NIES-843 0
Gloeobacter_violaceus_PCC_7421 1
Rivularia_sp._PCC_7116 1
Calothrix_sp._PCC_7507 0
Anabaena_variabilis_ATCC_29413 1
'Nostoc_azollae'_0708 0
Nostoc_sp._PCC_7107 1
Nostoc_punctiforme_PCC_73102 1
Nostoc_sp._PCC_7120 1
Nostoc_sp._PCC_7524 0
Anabaena_sp._90 0
Mycoplasma_crocodyli_MP145 1
Mycoplasma_mobile_163K 0
Mycoplasma_fermentans_M64 1
Mycoplasma_pulmonis_UAB_CTIP 1
Mycoplasma_hyorhinis_GDL-1 1
Mycoplasma_gallisepticum_str._F 1
Atopobium_parvulum_DSM_20469 0
Rubrobacter_xylanophilus_DSM_9941 1
Ilumatobacter_coccineus 0
Thermobispora_bispora_DSM_43833 0
Nakamurella_multipartita_DSM_44233 2
Acidothermus_cellulolyticus_11B 1
Modestobacter_marinus 1
Blastococcus_saxobsidens_DD2 1
Geodermatophilus_obscurus_DSM_43160 1
Kineococcus_radiotolerans_SRS30216 1
Catenulispora_acidiphila_DSM_44928 0
Frankia_symbiont_of_Datisca_glomerata 1
Frankia_sp._EAN1pec 1
Frankia_alni_ACN14a 1
Thermobifida_fusca_YX 0
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1
Thermomonospora_curvata_DSM_43183 0
Streptosporangium_roseum_DSM_43021 2
Kitasatospora_setae_KM-6054 1
Streptomyces_coelicolor_A3(2) 1
Streptomyces_sp._PAMC26508 1
Streptomyces_flavogriseus_ATCC_33331 1
Streptomyces_sp._SirexAA-E 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 1
Streptomyces_bingchenggensis_BCW-1 1
Streptomyces_violaceusniger_Tu_4113 1
Streptomyces_avermitilis_MA-4680 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Streptomyces_scabiei_87.22 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1
Actinosynnema_mirum_DSM_43827 1
Pseudonocardia_dioxanivorans_CB1190 1
Amycolatopsis_mediterranei_U32 1
Kribbella_flavida_DSM_17836 1
Nocardioides_sp._JS614 1
Propionibacterium_propionicum_F0230a 1
Microlunatus_phosphovorus_NM-1 0
Salinispora_tropica_CNB-440 0
Verrucosispora_maris_AB-18-032 1
Micromonospora_sp._L5 2
Micromonospora_aurantiaca_ATCC_27029 2
Actinoplanes_sp._N902-109 1
Actinoplanes_sp._SE50/110 1
Actinoplanes_missouriensis_431 2
Segniliparus_rotundus_DSM_44985 1
Tsukamurella_paurometabola_DSM_20162 0
Gordonia_sp._KTR9 0
Gordonia_polyisoprenivorans_VH2 0
Gordonia_bronchialis_DSM_43247 1
Rhodococcus_jostii_RHA1 1
Rhodococcus_equi_103S 1
Rhodococcus_opacus_B4 1
Rhodococcus_erythropolis_PR4 1
Nocardia_cyriacigeorgica_GUH-2 1
Nocardia_farcinica_IFM_10152 1
Amycolicicoccus_subflavus_DQS3-9A1 0
Mycobacterium_massiliense_str._GO_06 0
Mycobacterium_abscessus_ATCC_19977 0
Mycobacterium_sp._JLS 1
Mycobacterium_intracellulare_ATCC_13950 1
Mycobacterium_avium_104 1
Mycobacterium_vanbaalenii_PYR-1 1
Mycobacterium_canettii_CIPT_140010059 1
Mycobacterium_africanum_GM041182 1
Mycobacterium_tuberculosis_KZN_1435 1
Mycobacterium_tuberculosis 1
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 0
Mycobacterium_rhodesiae_NBB3 1
Mycobacterium_ulcerans_Agy99 1
Mycobacterium_gilvum_PYR-GCK 1
Mycobacterium_chubuense_NBB4 1
Mycobacterium_marinum_M 1
Mycobacterium_smegmatis_str._MC2_155 1
Corynebacterium_resistens_DSM_45100 0
Corynebacterium_aurimucosum_ATCC_700975 0
Corynebacterium_kroppenstedtii_DSM_44385 0
Corynebacterium_efficiens_YS-314 1
Corynebacterium_ulcerans_0102 1
Corynebacterium_jeikeium_K411 1
Corynebacterium_variabile_DSM_44702 0
Corynebacterium_pseudotuberculosis_316 1
Corynebacterium_glutamicum_R 1
Corynebacterium_diphtheriae_NCTC_13129 1
Sanguibacter_keddieii_DSM_10542 2
Kytococcus_sedentarius_DSM_20547 1
Beutenbergia_cavernae_DSM_12333 1
Leifsonia_xyli_subsp._xyli_str._CTCB07 1
Microbacterium_testaceum_StLB037 1
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 1
Jonesia_denitrificans_DSM_20603 1
Intrasporangium_calvum_DSM_43043 1
Brachybacterium_faecium_DSM_4810 1
Isoptericola_variabilis_225 2
Xylanimonas_cellulosilytica_DSM_15894 2
Cellulomonas_flavigena_DSM_20109 1
Cellulomonas_fimi_ATCC_484 1
[Cellvibrio]_gilvus_ATCC_13127 2
Arthrobacter_phenanthrenivorans_Sphe3 1
Arthrobacter_chlorophenolicus_A6 1
Arthrobacter_aurescens_TC1 2
Arthrobacter_arilaitensis_Re117 0
Kocuria_rhizophila_DC2201 1
Arthrobacter_sp._Rue61a 2
Arthrobacter_sp._FB24 1
Micrococcus_luteus_NCTC_2665 1
Gardnerella_vaginalis_409-05 1
Bifidobacterium_longum_subsp._longum_JDM301 1
Bifidobacterium_animalis_subsp._lactis_Bl-04 1
Bifidobacterium_dentium_Bd1 1
Bifidobacterium_breve_ACS-071-V-Sch8b 0
Bifidobacterium_adolescentis_ATCC_15703 0
Arcanobacterium_haemolyticum_DSM_20595 1
Mobiluncus_curtisii_ATCC_43063 0
Actinomyces_sp._F0330 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 0
Anaerolinea_thermophila_UNI-1 0
Thermomicrobium_roseum_DSM_5159 0
Sphaerobacter_thermophilus_DSM_20745 0
Herpetosiphon_aurantiacus_DSM_785 1
Chloroflexus_sp._MS-G 1
Chloroflexus_sp._Y-400-fl 1
Chloroflexus_aggregans_DSM_9485 1
Chloroflexus_aurantiacus_J-10-fl 1
Truepera_radiovictrix_DSM_17093 1
Deinococcus_gobiensis_I-0 0
Deinococcus_deserti_VCD115 1
Deinococcus_maricopensis_DSM_21211 0
Deinococcus_geothermalis_DSM_11300 0
Deinococcus_radiodurans_R1 0
Oceanithermus_profundus_DSM_14977 1
Meiothermus_silvanus_DSM_9946 0
Meiothermus_ruber_DSM_1279 1
Thermus_sp._CCB_US3_UF1 1
Thermus_scotoductus_SA-01 1
Anaerococcus_prevotii_DSM_20548 1
Finegoldia_magna_ATCC_29328 1
Megasphaera_elsdenii_DSM_20460 0
Acidaminococcus_fermentans_DSM_20731 0
Selenomonas_sputigena_ATCC_35185 0
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 0
Natranaerobius_thermophilus_JW/NM-WN-LF 0
Clostridiales_genomosp._BVAB3_str._UPII9-5 1
Eubacterium_siraeum 1
Clostridium_cellulolyticum_H10 0
Clostridium_thermocellum_ATCC_27405 1
Faecalibacterium_prausnitzii 1
Ruminococcus_bromii 2
Ruminococcus_albus_7 1
Oscillibacter_valericigenes_Sjm18-20 0
butyrate-producing_bacterium_SS3/4 0
butyrate-producing_bacterium_SM4/1 1
Pelotomaculum_thermopropionicum_SI 1
Desulfosporosinus_acidiphilus_SJ4 0
Desulfosporosinus_orientis_DSM_765 0
Desulfitobacterium_hafniense_Y51 0
Desulfitobacterium_dehalogenans_ATCC_51507 0
Desulfotomaculum_reducens_MI-1 0
Desulfotomaculum_acetoxidans_DSM_771 0
Desulfotomaculum_kuznetsovii_DSM_6115 1
Desulfotomaculum_carboxydivorans_CO-1-SRB 1
Desulfotomaculum_ruminis_DSM_2154 1
Acetobacterium_woodii_DSM_1030 0
Eubacterium_eligens_ATCC_27750 0
Eubacterium_limosum_KIST612 1
Clostridium_saccharolyticum_WM1 0
Clostridium_phytofermentans_ISDg 1
Clostridium_lentocellum_DSM_5427 1
[Ruminococcus]_obeum 0
Eubacterium_rectale_M104/1 3
Eubacterium_rectale_ATCC_33656 2
Coprococcus_sp._ART55/1 0
Roseburia_hominis_A2-183 1
Roseburia_intestinalis 2
Butyrivibrio_proteoclasticus_B316 1
Alkaliphilus_metalliredigens_QYMF 0
Clostridium_sp._BNL1100 0
Clostridium_novyi_NT 0
Clostridium_kluyveri_DSM_555 0
Clostridium_beijerinckii_NCIMB_8052 1
Clostridium_perfringens_ATCC_13124 0
Clostridium_cellulovorans_743B 0
Clostridium_acetobutylicum_ATCC_824 0
Mahella_australiensis_50-1_BON 0
Caldicellulosiruptor_obsidiansis_OB47 0
Caldicellulosiruptor_kronotskyensis_2002 0
Caldicellulosiruptor_hydrothermalis_108 0
Caldicellulosiruptor_owensensis_OL 0
Caldicellulosiruptor_lactoaceticus_6A 0
Caldicellulosiruptor_kristjanssonii_177R1B 0
Caldicellulosiruptor_saccharolyticus_DSM_8903 0
Caldicellulosiruptor_bescii_DSM_6725 0
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 0
Moorella_thermoacetica_ATCC_39073 1
Thermoanaerobacter_wiegelii_Rt8.B1 0
Halothermothrix_orenii_H_168 1
Halanaerobium_hydrogeniformans 1
Halanaerobium_praevalens_DSM_2228 1
Carnobacterium_sp._17-4 0
Carnobacterium_sp._WN1359 0
Aerococcus_urinae_ACS-120-V-Col10a 1
Tetragenococcus_halophilus_NBRC_12172 0
Lactobacillus_casei_ATCC_334 0
Lactobacillus_kefiranofaciens_ZW3 0
Lactobacillus_crispatus_ST1 1
Lactobacillus_rhamnosus_Lc_705 0
Lactobacillus_johnsonii_FI9785 1
Lactobacillus_salivarius_CECT_5713 2
Lactobacillus_ruminis_ATCC_27782 2
Lactobacillus_amylovorus_GRL1118 1
Lactobacillus_gasseri_ATCC_33323 1
Lactobacillus_plantarum_JDM1 1
Lactobacillus_helveticus_DPC_4571 1
Lactobacillus_acidophilus_30SC 1
Pediococcus_claussenii_ATCC_BAA-344 0
Lactococcus_garvieae_ATCC_49156 1
Lactococcus_lactis_subsp._cremoris_MG1363 1
Streptococcus_sp._I-P16 1
Streptococcus_sp._I-G2 1
Streptococcus_intermedius_JTH08 0
Streptococcus_gallolyticus_UCN34 1
Streptococcus_pseudopneumoniae_IS7493 0
Streptococcus_pasteurianus_ATCC_43144 0
Streptococcus_equi_subsp._equi_4047 1
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 2
Streptococcus_infantarius_subsp._infantarius_CJ18 0
Streptococcus_macedonicus_ACA-DC_198 0
Streptococcus_mitis_B6 1
Streptococcus_uberis_0140J 0
Streptococcus_parauberis_KCTC_11537 0
Streptococcus_parasanguinis_ATCC_15912 1
Streptococcus_pyogenes_str._Manfredo 0
Streptococcus_pneumoniae_P1031 0
Streptococcus_agalactiae_A909 0
Streptococcus_mutans_NN2025 0
Streptococcus_suis_P1/7 0
Streptococcus_sanguinis_SK36 1
Streptococcus_salivarius_57.I 0
Streptococcus_oralis_Uo5 1
Streptococcus_gordonii_str._Challis_substr._CH1 1
Exiguobacterium_sp._MH3 1
Exiguobacterium_sp._AT1b 1
Exiguobacterium_sibiricum_255-15 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1
Paenibacillus_sp._JDR-2 0
Paenibacillus_mucilaginosus_3016 1
Bacillus_selenitireducens_MLS10 0
Listeria_innocua_Clip11262 1
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 1
Geobacillus_thermoglucosidasius_C56-YS93 0
Oceanobacillus_iheyensis_HTE831 0
Anoxybacillus_flavithermus_WK1 0
Geobacillus_thermoleovorans_CCB_US3_UF5 0
Geobacillus_kaustophilus_HTA426 0
Geobacillus_sp._GHH01 0
Geobacillus_thermodenitrificans_NG80-2 0
Halobacillus_halophilus_DSM_2266 1
Bacillus_sp._JS 0
Bacillus_sp._1NLA3E 0
Bacillus_atrophaeus_1942 0
Bacillus_subtilis_subsp._subtilis_str._168 0
Bacillus_licheniformis_DSM_13_=_ATCC_14580 0
Bacillus_halodurans_C-125 0
Bacillus_weihenstephanensis_KBAB4 0
Bacillus_thuringiensis_str._Al_Hakam 0
Bacillus_cereus_03BB102 0
Bacillus_anthracis_str._A0248 0
Bacillus_pseudofirmus_OF4 0
Bacillus_megaterium_DSM_319 0
Bacillus_coagulans_2-6 0
Macrococcus_caseolyticus_JCSC5402 0
Gemmatimonas_aurantiaca_T-27 0
Melioribacter_roseus_P3M 1
Ignavibacterium_album_JCM_16511 1
Haliscomenobacter_hydrossis_DSM_1100 1
Niastella_koreensis_GR20-10 3
Chitinophaga_pinensis_DSM_2588 1
Salinibacter_ruber_M8 1
Rhodothermus_marinus_DSM_4252 0
Belliella_baltica_DSM_15883 0
Marivirga_tractuosa_DSM_4126 0
Dyadobacter_fermentans_DSM_18053 2
Spirosoma_linguale_DSM_74 1
Tannerella_forsythia_ATCC_43037 0
Paludibacter_propionicigenes_WB4 1
Bacteroides_sp._CF50 1
Prevotella_melaninogenica_ATCC_25845 1
Prevotella_intermedia_17 1
Prevotella_denticola_F0289 1
Prevotella_ruminicola_23 1
Alistipes_finegoldii_DSM_17242 1
Bacteroides_salanitronis_DSM_18170 2
Bacteroides_helcogenes_P_36-108 1
Bacteroides_vulgatus_ATCC_8482 1
Bacteroides_thetaiotaomicron_VPI-5482 2
Bacteroides_fragilis_YCH46 1
Solitalea_canadensis_DSM_3403 0
Sphingobacterium_sp._21 2
Lacinutrix_sp._5H-3-7-4 0
Croceibacter_atlanticus_HTCC2559 0
Cellulophaga_algicola_DSM_14237 0
Flavobacteriaceae_bacterium_3519-10 0
Polaribacter_sp._MED152 0
Flavobacterium_indicum_GPTSA100-9 0
Flavobacterium_branchiophilum_FL-15 0
Flavobacterium_johnsoniae_UW101 0
Candidatus_Protochlamydia_amoebophila_UWE25 0
Parachlamydia_acanthamoebae_UV-7 0
Simkania_negevensis_Z 1
Chlamydophila_pecorum_E58 1
Chlamydia_muridarum_Nigg 1
Chlamydophila_pneumoniae_TW-183 1
Chlamydophila_caviae_GPIC 1
Chlamydophila_felis_Fe/C-56 1
Chlamydophila_abortus_S26/3 1
Chlamydia_psittaci_01DC11 1
Chlamydia_trachomatis_B/Jali20/OT 1
Isosphaera_pallida_ATCC_43644 1
Rhodopirellula_baltica_SH_1 0
Pirellula_staleyi_DSM_6068 0
Methylacidiphilum_infernorum_V4 1
Coraliomargarita_akajimensis_DSM_45221 0
Opitutus_terrae_PB90-1 2
Fretibacterium_fastidiosum 0
Thermanaerovibrio_acidaminovorans_DSM_6589 0
Anaerobaculum_mobile_DSM_13181 0
Turneriella_parva_DSM_21527 1
Spirochaeta_caldaria_DSM_7334 0
Treponema_brennaborense_DSM_12168 0
Treponema_succinifaciens_DSM_2489 1
Spirochaeta_africana_DSM_8902 3
Marinitoga_piezophila_KA3 0
Petrotoga_mobilis_SJ95 0
Kosmotoga_olearia_TBF_19.5.1 0
Fervidobacterium_pennivorans_DSM_9078 0
Fervidobacterium_nodosum_Rt17-B1 0
Thermosipho_melanesiensis_BI429 0
Thermosipho_africanus_TCF52B 0
Thermotoga_lettingae_TMO 0
Thermotoga_thermarum_DSM_5069 0
Thermotoga_sp._RQ2 0
Thermotoga_naphthophila_RKU-10 0
Thermotoga_petrophila_RKU-1 0
Thermotoga_neapolitana_DSM_4359 0
Thermotoga_maritima_MSB8 0
Hydrogenobaculum_sp._SN 0
Hydrogenobaculum_sp._HO 0
Hydrogenobaculum_sp._Y04AAS1 0
Aquifex_aeolicus_VF5 0
Hydrogenobacter_thermophilus_TK-6 0
Candidatus_Solibacter_usitatus_Ellin6076 1
Granulicella_tundricola_MP5ACTX9 2
Granulicella_mallensis_MP5ACTX8 2
Candidatus_Koribacter_versatilis_Ellin345 1
Terriglobus_saanensis_SP1PR4 2
Terriglobus_roseus_DSM_18391 2
Acidobacterium_capsulatum_ATCC_51196 2
Thermodesulfovibrio_yellowstonii_DSM_11347 0
Candidatus_Nitrospira_defluvii 0
Leptospirillum_ferrooxidans_C2-3 1
Streptobacillus_moniliformis_DSM_12112 1
Sebaldella_termitidis_ATCC_33386 0
Leptotrichia_buccalis_C-1013-b 0
Ilyobacter_polytropus_DSM_2926 0
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 0
Candidatus_Methylomirabilis_oxyfera 0
Acidithiobacillus_ferrivorans_SS3 1
Acidithiobacillus_ferrooxidans_ATCC_53993 1
Bdellovibrio_bacteriovorus_HD100 0
Nitratifractor_salsuginis_DSM_16511 0
Sulfuricurvum_kujiense_DSM_16994 0
Desulfobacca_acetoxidans_DSM_11109 1
Desulfomonile_tiedjei_DSM_6799 1
Syntrophobacter_fumaroxidans_MPOB 1
Desulfurivibrio_alkaliphilus_AHT2 1
Desulfobulbus_propionicus_DSM_2032 0
Desulfohalobium_retbaense_DSM_5692 1
Desulfovibrio_magneticus_RS-1 0
Desulfovibrio_alaskensis_G20 1
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 0
Desulfovibrio_salexigens_DSM_2638 1
Desulfovibrio_africanus_str._Walvis_Bay 2
Hippea_maritima_DSM_10411 0
Geobacter_daltonii_FRC-32 1
Geobacter_sp._M21 1
Geobacter_bemidjiensis_Bem 1
Geobacter_sulfurreducens_KN400 1
Geobacter_metallireducens_GS-15 1
Pelobacter_propionicus_DSM_2379 1
Haliangium_ochraceum_DSM_14365 1
Sorangium_cellulosum_'So_ce_56' 2
Anaeromyxobacter_sp._Fw109-5 1
Anaeromyxobacter_dehalogenans_2CP-1 1
Stigmatella_aurantiaca_DW4/3-1 2
Corallococcus_coralloides_DSM_2259 1
Myxococcus_xanthus_DK_1622 1
Myxococcus_fulvus_HW-1 1
Dechloromonas_aromatica_RCB 0
Thauera_sp._MZ1T 0
Azoarcus_sp._KH32C 1
Azoarcus_sp._BH72 0
Aromatoleum_aromaticum_EbN1 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 0
Rubrivivax_gelatinosus_IL144 1
Burkholderia_phytofirmans_PsJN 1
Burkholderia_phymatum_STM815 1
Burkholderia_xenovorans_LB400 1
Ralstonia_eutropha_JMP134 0
Cupriavidus_taiwanensis_LMG_19424 1
Cupriavidus_necator_N-1 1
Ralstonia_eutropha_H16 1
Ralstonia_pickettii_12D 1
Ralstonia_solanacearum_CFBP2957 1
Burkholderia_sp._RPE64 1
Burkholderia_sp._CCGE1002 1
Burkholderia_thailandensis_E264 0
Burkholderia_pseudomallei_1106a 1
Burkholderia_mallei_SAVP1 1
Burkholderia_ambifaria_AMMD 1
Burkholderia_cenocepacia_HI2424 1
Burkholderia_multivorans_ATCC_17616 1
Burkholderia_vietnamiensis_G4 1
Burkholderia_gladioli_BSR3 1
Burkholderia_glumae_BGR1 1
Variovorax_paradoxus_S110 1
Rhodoferax_ferrireducens_T118 1
Acidovorax_citrulli_AAC00-1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 1
Herbaspirillum_seropedicae_SmR1 1
Bordetella_petrii_DSM_12804 1
Bordetella_pertussis_Tohama_I 1
Bordetella_parapertussis_12822 0
Bordetella_bronchiseptica_RB50 1
Achromobacter_xylosoxidans_A8 1
Achromobacter_xylosoxidans 1
Thiobacillus_denitrificans_ATCC_25259 1
Nitrosospira_multiformis_ATCC_25196 1
Nitrosomonas_sp._Is79A3 0
Nitrosomonas_eutropha_C91 0
Nitrosomonas_europaea_ATCC_19718 0
Sideroxydans_lithotrophicus_ES-1 0
Gallionella_capsiferriformans_ES-2 0
Methylotenera_versatilis_301 0
Methylotenera_mobilis_JLW8 0
Methylovorus_sp._MP688 1
Methylovorus_glucosetrophus_SIP3-4 1
Methylobacillus_flagellatus_KT 1
Magnetococcus_marinus_MC-1 0
Novosphingobium_sp._PP1Y 1
Novosphingobium_aromaticivorans_DSM_12444 1
Sphingobium_sp._SYK-6 2
Sphingobium_japonicum_UT26S 1
Sphingobium_chlorophenolicum_L-1 1
Hirschia_baltica_ATCC_49814 1
Jannaschia_sp._CCS1 0
Ketogulonicigenium_vulgare_Y25 1
Ketogulonigenium_vulgarum_WSH-001 1
Roseobacter_litoralis_Och_149 0
Roseobacter_denitrificans_OCh_114 0
Rhodobacter_sphaeroides_ATCC_17029 1
Rhodobacter_capsulatus_SB_1003 0
Paracoccus_denitrificans_PD1222 0
Rhodospirillum_photometricum_DSM_122 0
Tistrella_mobilis_KA081020-065 0
Magnetospirillum_magneticum_AMB-1 0
Rhodospirillum_centenum_SW 0
Rhodospirillum_rubrum_F11 2
Azospirillum_lipoferum_4B 1
Azospirillum_sp._B510 0
Azospirillum_brasilense_Sp245 0
Gluconacetobacter_xylinus_NBRC_3288 1
Granulibacter_bethesdensis_CGDNIH1 1
Gluconacetobacter_diazotrophicus_PAl_5 1
Acidiphilium_cryptum_JF-5 0
Acetobacter_pasteurianus_IFO_3283-01 1
Starkeya_novella_DSM_506 1
Azorhizobium_caulinodans_ORS_571 1
Methylobacterium_chloromethanicum_CM4 1
Methylobacterium_extorquens_AM1 1
Methylobacterium_sp._4-46 1
Methylobacterium_populi_BJ001 1
Methylobacterium_nodulans_ORS_2060 1
Methylobacterium_radiotolerans_JCM_2831 1
Parvibaculum_lavamentivorans_DS-1 1
Sinorhizobium_fredii_NGR234 1
Sinorhizobium_medicae_WSM419 1
Sinorhizobium_meliloti_AK83 1
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 2
Rhizobium_etli_CIAT_652 1
Rhizobium_leguminosarum_bv._viciae_3841 1
Agrobacterium_tumefaciens_str._C58 1
Agrobacterium_radiobacter_K84 0
Agrobacterium_sp._H13-3 1
Agrobacterium_vitis_S4 1
Mesorhizobium_sp._BNC1 1
Mesorhizobium_opportunistum_WSM2075 0
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 0
Mesorhizobium_loti_MAFF303099 0
Pelagibacterium_halotolerans_B2 0
Rhodomicrobium_vannielii_ATCC_17100 0
Oligotropha_carboxidovorans_OM4 1
Rhodopseudomonas_palustris_BisA53 1
Nitrobacter_winogradskyi_Nb-255 1
Nitrobacter_hamburgensis_X14 1
Bradyrhizobium_japonicum_USDA_110 1
Bradyrhizobium_sp._ORS_278 1
Methylocystis_sp._SC2 0
Saccharophagus_degradans_2-40 0
Teredinibacter_turnerae_T7901 0
Cellvibrio_japonicus_Ueda107 0
Aggregatibacter_aphrophilus_NJ8700 1
Vibrio_sp._Ex25 0
Vibrio_harveyi_ATCC_BAA-1116 0
Vibrio_parahaemolyticus_RIMD_2210633 0
Vibrio_splendidus_LGP32 1
Vibrio_anguillarum_775 0
Vibrio_furnissii_NCTC_11218 0
Vibrio_vulnificus_MO6-24/O 0
Vibrio_cholerae_O395 0
Photobacterium_profundum_SS9 0
Psychromonas_ingrahamii_37 0
Shewanella_piezotolerans_WP3 0
Shewanella_loihica_PV-4 0
Shewanella_oneidensis_MR-1 0
Shewanella_baltica_OS185 0
Shewanella_sp._MR-4 0
Shewanella_amazonensis_SB2B 0
Shewanella_violacea_DSS12 0
Shewanella_frigidimarina_NCIMB_400 0
Shewanella_putrefaciens_CN-32 0
Colwellia_psychrerythraea_34H 0
Pseudoalteromonas_atlantica_T6c 0
Glaciecola_sp._4H-3-7+YE-5 0
Glaciecola_nitratireducens_FR1064 0
Marinobacter_adhaerens_HP15 0
Marinobacter_hydrocarbonoclasticus_ATCC_49840 0
Marinobacter_aquaeolei_VT8 0
Alteromonas_sp._SN2 0
Alteromonas_macleodii_str._'Deep_ecotype' 1
Hahella_chejuensis_KCTC_2396 0
Marinomonas_posidonica_IVIA-Po-181 1
Marinomonas_sp._MWYL1 1
Marinomonas_mediterranea_MMB-1 1
Methylomicrobium_alcaliphilum 1
Methylomonas_methanica_MC09 1
Methylococcus_capsulatus_str._Bath 0
Pseudoxanthomonas_spadix_BD-a59 1
Pseudoxanthomonas_suwonensis_11-1 0
Stenotrophomonas_maltophilia_K279a 1
Xanthomonas_axonopodis_pv._citri_str._306 1
Xanthomonas_albilineans_GPE_PC73 1
Xanthomonas_oryzae_pv._oryzae_PXO99A 1
Xanthomonas_campestris_pv._campestris_str._B100 1
Halothiobacillus_neapolitanus_c2 0
Thioalkalivibrio_sulfidophilus_HL-EbGr7 0
Thioalkalivibrio_sp._K90mix 0
Allochromatium_vinosum_DSM_180 0
Thiocystis_violascens_DSM_198 0
Nitrosococcus_watsonii_C-113 1
Nitrosococcus_halophilus_Nc4 1
Nitrosococcus_oceani_ATCC_19707 1
Edwardsiella_ictaluri_93-146 1
Edwardsiella_tarda_EIB202 1
Rahnella_sp._Y9602 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1
Serratia_sp._ATCC_39006 1
Pantoea_sp._At-9b 2
Pantoea_vagans_C9-1 2
Pantoea_ananatis_LMG_20103 2
Erwinia_tasmaniensis_Et1/99 1
Erwinia_sp._Ejp617 1
Erwinia_billingiae_Eb661 1
Erwinia_pyrifoliae_Ep1/96 1
Erwinia_amylovora_ATCC_49946 1
Cronobacter_turicensis_z3032 1
Enterobacteriaceae_bacterium_strain_FGI_57 2
Shigella_sonnei_Ss046 1
Shigella_flexneri_5_str._8401 1
Shigella_dysenteriae_Sd197 1
Shigella_boydii_CDC_3083-94 1
Salmonella_bongori_NCTC_12419 2
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 2
Klebsiella_oxytoca_E718 2
Klebsiella_variicola_At-22 1
Klebsiella_pneumoniae_NTUH-K2044 1
Enterobacter_aerogenes_KCTC_2190 1
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1
Enterobacter_sp._R4-368 2
Enterobacter_sp._638 1
Enterobacter_asburiae_LF7a 1
Enterobacter_cloacae_subsp._dissolvens_SDM 2
Citrobacter_rodentium_ICC168 2
Citrobacter_koseri_ATCC_BAA-895 1
Azotobacter_vinelandii_DJ 1
Pseudomonas_sp._TKP 1
Pseudomonas_sp._UW4 1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1
Pseudomonas_entomophila_L48 1
Pseudomonas_syringae_pv._tomato_str._DC3000 1
Pseudomonas_stutzeri_A1501 1
Pseudomonas_fulva_12-X 1
Pseudomonas_putida_F1 1
Pseudomonas_protegens_Pf-5 1
Pseudomonas_fluorescens_SBW25 1
Pseudomonas_mendocina_ymp 1
Pseudomonas_aeruginosa_UCBPP-PA14 1
Pseudomonas_sp._VLB120 1
Thiomicrospira_crunogena_XCL-2 0
Francisella_noatunensis_subsp._orientalis_str._Toba_04 0
Francisella_sp._TX077308 0
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 0
Francisella_tularensis_subsp._tularensis_WY96-3418 0
Francisella_cf._novicida_3523 0
Francisella_novicida_U112 0
Thermogladius_cellulolyticus_1633 1
Thermosphaera_aggregans_DSM_11486 1
Acidianus_hospitalis_W1 1
Sulfolobus_acidocaldarius_DSM_639 1
Thermofilum_sp._1910b 0
Methanoculleus_marisnigri_JR1 0
Thermococcus_sp._4557 0
Thermococcus_kodakarensis_KOD1 0
Pyrococcus_furiosus_COM1 0
Halomicrobium_mukohataei_DSM_12286 1
Acholeplasma_laidlawii_PG-8A 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number
Histoplasma_capsulatum_H143 0
Aspergillus_fumigatus_A1163_ 0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Chroococcidiopsis_thermalis_PCC_7203 0
Chamaesiphon_minutus_PCC_6605 1
Synechocystis_sp._PCC_6803_substr._PCC-P 0
Synechocystis_sp._PCC_6803_substr._PCC-N 0
Synechocystis_sp._PCC_6803_substr._GT-I 0
Synechocystis_sp._PCC_6803 0
Cyanobium_gracile_PCC_6307 0
Dactylococcopsis_salina_PCC_8305 0
Synechococcus_sp._JA-2-3B'a(2-13) 1
Synechococcus_sp._JA-3-3Ab 1
Synechococcus_sp._CC9902 0
Synechococcus_sp._RCC307 0
Synechococcus_sp._CC9605 0
Synechococcus_sp._WH_8102 0
Synechococcus_sp._WH_7803 0
Synechococcus_sp._PCC_7002 0
Synechococcus_elongatus_PCC_6301 0
Prochlorococcus_marinus_str._NATL1A 0
Prochlorococcus_marinus_str._MIT_9301 0
Prochlorococcus_marinus_str._AS9601 0
Prochlorococcus_marinus_subsp._marinus_str._CCMP1375 0
Prochlorococcus_marinus_subsp._pastoris_str._CCMP1986 0
Prochlorococcus_marinus_str._MIT_9215 0
Prochlorococcus_marinus_str._MIT_9211 0
Prochlorococcus_marinus_str._MIT_9313 0
Prochlorococcus_marinus_str._MIT_9312 0
Prochlorococcus_marinus_str._MIT_9303 0
Prochlorococcus_marinus_str._NATL2A 0
Crinalium_epipsammum_PCC_9333 1
Oscillatoria_nigro-viridis_PCC_7112 1
Oscillatoria_acuminata_PCC_6304 1
Arthrospira_platensis_NIES-39 0
Cyanothece_sp._PCC_7822 1
Cyanothece_sp._PCC_7425 0
Cyanothece_sp._PCC_7424 0
Cyanothece_sp._ATCC_51142 0
Cyanothece_sp._PCC_8801 0
Cyanobacterium_aponinum_PCC_10605 0
Cyanobacterium_stanieri_PCC_7202 0
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 0
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 0
Stanieria_cyanosphaera_PCC_7437 1
Calothrix_parietina_Calothrix_sp._PCC_6303 0
Cylindrospermum_stagnale_PCC_7417 0
Anabaena_cylindrica_PCC_7122 1
Mycoplasma_cynos_C142 0
Mycoplasma_fermentans_JER 1
Mycoplasma_fermentans_PG18 1
Mycoplasma_hyorhinis_SK76 1
Mycoplasma_hyorhinis_MCLD 1
Mycoplasma_hyorhinis_HUB-1 1
Mycoplasma_hyorhinis_DBS_1050 1
Mycoplasma_hyopneumoniae_7422 1
Mycoplasma_hyopneumoniae_7448 1
Mycoplasma_hyopneumoniae_J 1
Frankia_sp._EuI1c 1
Frankia_sp._CcI3 1
Nocardiopsis_alba_ATCC_BAA-2165 1
Streptomyces_albus_J1074 1
Streptomyces_rapamycinicus_NRRL_5491 1
Streptomyces_davawensis_JCM_4913 1
Streptomyces_fulvissimus_DSM_40593 1
Streptomyces_venezuelae_ATCC_10712 1
Streptomyces_collinus_Tu_365 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1
Saccharothrix_espanaensis_DSM_44229 1
Amycolatopsis_mediterranei_RB 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_mediterranei_S699 1
Propionibacterium_avidum_44067 1
Propionibacterium_acidipropionici_ATCC_4875 1
Actinoplanes_friuliensis_DSM_7358 1
Rhodococcus_pyridinivorans_SB3094 1
Rhodococcus_erythropolis_CCM2595 1
Nocardia_brasiliensis_ATCC_700358 0
Mycobacterium_sp._MOTT36Y 1
Mycobacterium_sp._JDM601 1
Mycobacterium_abscessus_subsp._bolletii_50594 0
Mycobacterium_liflandii_128FXT 1
Mycobacterium_sp._KMS 1
Mycobacterium_sp._MCS 1
Mycobacterium_yongonense_05-1390 1
Mycobacterium_intracellulare_MOTT-64 1
Mycobacterium_indicus_pranii_MTCC_9506 1
Mycobacterium_intracellulare_MOTT-02 1
Mycobacterium_avium_subsp._paratuberculosis_MAP4 1
Mycobacterium_avium_subsp._paratuberculosis_K-10 1
Mycobacterium_canettii_CIPT_140070017 1
Mycobacterium_canettii_CIPT_140060008 0
Mycobacterium_canettii_CIPT_140070008 1
Mycobacterium_canettii_CIPT_140070010 1
Mycobacterium_tuberculosis_EAI5/NITR206 0
Mycobacterium_tuberculosis_EAI5 0
Mycobacterium_tuberculosis_CAS/NITR204 1
Mycobacterium_tuberculosis_str._Beijing/NITR203 1
Mycobacterium_tuberculosis_UT205 1
Mycobacterium_tuberculosis_RGTB423 0
Mycobacterium_tuberculosis_RGTB327 1
Mycobacterium_tuberculosis_CTRI-2 1
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 1
Mycobacterium_tuberculosis_KZN_605 1
Mycobacterium_tuberculosis_KZN_4207 1
Mycobacterium_tuberculosis_CCDC5180 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_H37Ra 1
Mycobacterium_tuberculosis_str._Haarlem/NITR202 0
Mycobacterium_tuberculosis_str._Haarlem 1
Mycobacterium_tuberculosis_F11 1
Mycobacterium_tuberculosis_H37Rv 1
Mycobacterium_tuberculosis_CDC1551 1
Mycobacterium_bovis_AF2122/97 1
Mycobacterium_bovis_BCG_str._Korea_1168P 0
Mycobacterium_bovis_BCG_str._Mexico 0
Mycobacterium_bovis_BCG_str._Tokyo_172 0
Mycobacterium_gilvum_Spyr1 1
Mycobacterium_smegmatis_str._MC2_155 1
Mycobacterium_kansasii_ATCC_12478 1
Corynebacterium_maris_DSM_45190 1
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 1
Corynebacterium_terpenotabidum_Y-11 0
Corynebacterium_ulcerans_BR-AD22 1
Corynebacterium_ulcerans_809 1
Corynebacterium_callunae_DSM_20147 1
Corynebacterium_pseudotuberculosis_258 1
Corynebacterium_pseudotuberculosis_Cp162 1
Corynebacterium_pseudotuberculosis_P54B96 1
Corynebacterium_pseudotuberculosis_267 1
Corynebacterium_pseudotuberculosis_1/06-A 1
Corynebacterium_pseudotuberculosis_42/02-A 1
Corynebacterium_pseudotuberculosis_3/99-5 1
Corynebacterium_pseudotuberculosis_31 1
Corynebacterium_pseudotuberculosis_CIP_52.97 0
Corynebacterium_pseudotuberculosis_PAT10 1
Corynebacterium_pseudotuberculosis_I19 1
Corynebacterium_pseudotuberculosis_FRC41 1
Corynebacterium_pseudotuberculosis_C231 1
Corynebacterium_pseudotuberculosis_1002 1
Corynebacterium_glutamicum_MB001 1
Corynebacterium_glutamicum_SCgG2 1
Corynebacterium_glutamicum_SCgG1 1
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_diphtheriae_BH8 1
Corynebacterium_diphtheriae_INCA_402 1
Corynebacterium_diphtheriae_VA01 1
Corynebacterium_diphtheriae_HC04 1
Corynebacterium_diphtheriae_HC03 1
Corynebacterium_diphtheriae_HC02 0
Corynebacterium_diphtheriae_HC01 1
Corynebacterium_diphtheriae_241 1
Corynebacterium_diphtheriae_CDCE_8392 1
Corynebacterium_diphtheriae_PW8 1
Corynebacterium_diphtheriae_C7_(beta) 1
Corynebacterium_diphtheriae_31A 1
Leifsonia_xyli_subsp._cynodontis_DSM_46306 1
Clavibacter_michiganensis_subsp._sepedonicus 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1
Gardnerella_vaginalis_HMP9231 2
Gardnerella_vaginalis_ATCC_14019 2
Bifidobacterium_longum_NCC2705 0
Bifidobacterium_longum_DJO10A 0
Bifidobacterium_longum_subsp._infantis_157F 0
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 0
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 0
Bifidobacterium_longum_subsp._longum_KACC_91563 0
Bifidobacterium_longum_subsp._longum_BBMN68 0
Bifidobacterium_longum_subsp._longum_F8 0
Bifidobacterium_longum_subsp._longum_JCM_1217 0
Bifidobacterium_thermophilum_RBL67 2
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 1
Bifidobacterium_animalis_subsp._lactis_Bl12 1
Bifidobacterium_animalis_subsp._lactis_B420 1
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 1
Bifidobacterium_animalis_subsp._lactis_BLC1 1
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 1
Bifidobacterium_animalis_subsp._lactis_Bi-07 1
Bifidobacterium_animalis_subsp._lactis_V9 1
Bifidobacterium_animalis_subsp._lactis_DSM_10140 1
Bifidobacterium_animalis_subsp._lactis_BB-12 1
Bifidobacterium_breve_UCC2003 0
Actinomyces_graevenitzii_C83_ 0
Actinomyces_odontolyticus_ATCC_17982 0
Actinomyces_viscosus_C505 1
Deinococcus_peraridilitoris_DSM_19664 1
Eubacterium_siraeum_V10Sc8a 1
Clostridium_thermocellum_DSM_1313 1
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 0
Faecalibacterium_prausnitzii_L2-6 1
Ruminococcus_champanellensis_18P13 0
Clostridium_acidurici_9a 0
Desulfitobacterium_dichloroeliminans_LMG_P-21439 0
Desulfitobacterium_hafniense_DCB-2 0
Desulfotomaculum_gibsoniae_DSM_7213 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 1
Coprococcus_catus_GD/7 0
Roseburia_intestinalis_XB6B4 2
Clostridium_sp._SY8519 0
Clostridium_saccharobutylicum_DSM_13864 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 2
Clostridium_kluyveri_NBRC_12016 0
Clostridium_perfringens_SM101 0
Clostridium_perfringens_str._13 0
Clostridium_pasteurianum_BC1 0
Clostridium_botulinum_BKT015925 0
Clostridium_botulinum_E3_str._Alaska_E43 1
Clostridium_acetobutylicum_DSM_1731 0
Clostridium_acetobutylicum_EA_2018 0
Thermacetogenium_phaeum_DSM_12270 1
Halobacteroides_halobius_DSM_5150 0
Enterococcus_casseliflavus_EC20 0
Leuconostoc_gelidum_JB7 1
Lactobacillus_paracasei_subsp._paracasei_8700:2 1
Lactobacillus_casei_LOCK919 1
Lactobacillus_casei_W56 1
Lactobacillus_casei_LC2W 1
Lactobacillus_casei_BD-II 1
Lactobacillus_casei_BL23 1
Lactobacillus_casei_str._Zhang 1
Lactobacillus_rhamnosus_LOCK908 0
Lactobacillus_rhamnosus_LOCK900 0
Lactobacillus_rhamnosus_ATCC_8530 0
Lactobacillus_rhamnosus_GG 0
Lactobacillus_rhamnosus_GG 0
Lactobacillus_johnsonii_N6.2 1
Lactobacillus_johnsonii_DPC_6026 1
Lactobacillus_johnsonii_NCC_533 1
Lactobacillus_salivarius_UCC118 2
Lactobacillus_amylovorus_GRL_1112 1
Lactobacillus_plantarum_16 1
Lactobacillus_plantarum_ZJ316 1
Lactobacillus_plantarum_subsp._plantarum_ST-III 1
Lactobacillus_plantarum_subsp._plantarum_P-8 1
Lactobacillus_plantarum_WCFS1 1
Lactobacillus_helveticus_R0052 1
Lactobacillus_helveticus_H10 1
Lactobacillus_helveticus_CNRZ32 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 1
Lactobacillus_acidophilus_La-14 0
Lactobacillus_acidophilus_NCFM 0
Lactococcus_garvieae_Lg2 1
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 1
Lactococcus_lactis_subsp._lactis_IO-1 1
Lactococcus_lactis_subsp._lactis_CV56 1
Lactococcus_lactis_subsp._lactis_KF147 1
Lactococcus_lactis_subsp._lactis_Il1403 1
Lactococcus_lactis_subsp._cremoris_KW2 1
Lactococcus_lactis_subsp._cremoris_UC509.9 1
Lactococcus_lactis_subsp._cremoris_A76 1
Lactococcus_lactis_subsp._cremoris_NZ9000 1
Lactococcus_lactis_subsp._cremoris_SK11 1
Streptococcus_constellatus_subsp._pharyngis_C1050 0
Streptococcus_constellatus_subsp._pharyngis_C818 0
Streptococcus_constellatus_subsp._pharyngis_C232 0
Streptococcus_intermedius_B196 0
Streptococcus_intermedius_C270 0
Streptococcus_anginosus_C238 0
Streptococcus_anginosus_C1051 0
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 1
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 1
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 1
Streptococcus_equi_subsp._zooepidemicus 1
Streptococcus_dysgalactiae_subsp._equisimilis_167 2
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 2
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 2
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 2
Streptococcus_oligofermentans_AS_1.3089 1
Streptococcus_iniae_SF1 0
Streptococcus_parasanguinis_FW213 1
Streptococcus_pyogenes_HSC5 0
Streptococcus_pyogenes_A20 1
Streptococcus_pyogenes_MGAS1882 0
Streptococcus_pyogenes_MGAS15252 0
Streptococcus_pyogenes_Alab49 0
Streptococcus_pyogenes_MGAS10750 1
Streptococcus_pyogenes_MGAS10270 1
Streptococcus_pyogenes_MGAS2096 0
Streptococcus_pyogenes_MGAS9429 0
Streptococcus_pyogenes_MGAS6180 1
Streptococcus_pyogenes_NZ131 0
Streptococcus_pyogenes_MGAS8232 0
Streptococcus_pyogenes_MGAS10394 0
Streptococcus_pyogenes_MGAS315 0
Streptococcus_pyogenes_SSI-1 0
Streptococcus_pyogenes_M1_476 1
Streptococcus_pyogenes_MGAS5005 1
Streptococcus_pyogenes_M1_GAS 1
Streptococcus_pneumoniae_A026 0
Streptococcus_pneumoniae_ST556 0
Streptococcus_pneumoniae_SPNA45 1
Streptococcus_pneumoniae_SPN994039 1
Streptococcus_pneumoniae_SPN994038 1
Streptococcus_pneumoniae_SPN034183 1
Streptococcus_pneumoniae_SPN034156 1
Streptococcus_pneumoniae_INV104 0
Streptococcus_pneumoniae_INV200 0
Streptococcus_pneumoniae_OXC141 1
Streptococcus_pneumoniae_gamPNI0373 0
Streptococcus_pneumoniae_AP200 0
Streptococcus_pneumoniae_ATCC_700669 1
Streptococcus_pneumoniae_TCH8431/19A 0
Streptococcus_pneumoniae_CGSP14 1
Streptococcus_pneumoniae_G54 0
Streptococcus_pneumoniae_JJA 1
Streptococcus_pneumoniae_70585 1
Streptococcus_pneumoniae_Hungary19A-6 2
Streptococcus_pneumoniae_Taiwan19F-14 0
Streptococcus_pneumoniae_D39 1
Streptococcus_pneumoniae_670-6B 0
Streptococcus_pneumoniae_R6 1
Streptococcus_pneumoniae_TIGR4 0
Streptococcus_agalactiae_ILRI112 0
Streptococcus_agalactiae_ILRI005 0
Streptococcus_agalactiae_09mas018883 0
Streptococcus_agalactiae_2-22 0
Streptococcus_agalactiae_SA20-06 0
Streptococcus_agalactiae_GD201008-001 0
Streptococcus_agalactiae_NEM316 0
Streptococcus_agalactiae_2603V/R 0
Streptococcus_mutans_GS-5 0
Streptococcus_mutans_LJ23 0
Streptococcus_mutans_UA159 0
Streptococcus_suis_T15 1
Streptococcus_suis_TL13 0
Streptococcus_suis_SC070731 0
Streptococcus_suis_S735 0
Streptococcus_suis_ST3 1
Streptococcus_suis_D9 0
Streptococcus_suis_SS12 0
Streptococcus_suis_D12 0
Streptococcus_suis_ST1 0
Streptococcus_suis_A7 0
Streptococcus_suis_JS14 0
Streptococcus_suis_BM407 0
Streptococcus_suis_SC84 0
Streptococcus_suis_GZ1 0
Streptococcus_suis_98HAH33 0
Streptococcus_suis_05ZYH33 0
Streptococcus_salivarius_CCHSS3 0
Streptococcus_salivarius_JIM8777 0
Exiguobacterium_antarcticum_B7 1
Paenibacillus_sp._Y412MC10 1
Paenibacillus_mucilaginosus_KNP414 1
Paenibacillus_mucilaginosus_K02 1
Listeria_monocytogenes_serotype_4b_str._LL195 1
Listeria_monocytogenes_07PF0776 1
Listeria_monocytogenes_M7 1
Listeria_monocytogenes_J1-220 1
Listeria_monocytogenes_J1816 1
Listeria_monocytogenes_SLCC2376 1
Listeria_monocytogenes_ATCC_19117 1
Listeria_monocytogenes_L312 1
Listeria_monocytogenes_SLCC2540 1
Listeria_monocytogenes_SLCC2378 1
Listeria_monocytogenes_L99 1
Listeria_monocytogenes_HCC23 1
Listeria_monocytogenes_serotype_4b_str._F2365 1
Geobacillus_sp._C56-T3 0
Geobacillus_sp._Y4.1MC1 0
Geobacillus_sp._Y412MC52 0
Geobacillus_sp._Y412MC61 0
Amphibacillus_xylanus_NBRC_15112 1
Bacillus_licheniformis_9945A 0
Bacillus_subtilis_PY79 0
Bacillus_subtilis_XF-1 0
Bacillus_subtilis_QB928 0
Bacillus_subtilis_BSn5 0
Bacillus_subtilis_subsp._subtilis_str._BAB-1 0
Bacillus_subtilis_subsp._subtilis_str._BSP1 0
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 0
Bacillus_subtilis_subsp._subtilis_6051-HGW 0
Bacillus_subtilis_subsp._spizizenii_TU-B-10 0
Bacillus_subtilis_subsp._spizizenii_str._W23 0
Bacillus_subtilis_subsp._natto_BEST195 0
Bacillus_licheniformis_DSM_13_=_ATCC_14580 0
Bacillus_infantis_NRRL_B-14911 0
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 0
Bacillus_toyonensis_BCT-7112 0
Bacillus_thuringiensis_HD-771 0
Bacillus_thuringiensis_HD-789 0
Bacillus_thuringiensis_MC28 0
Bacillus_thuringiensis_serovar_chinensis_CT-43 0
Bacillus_thuringiensis_YBT-1518 0
Bacillus_thuringiensis_Bt407 0
Bacillus_thuringiensis_serovar_konkukian_str._97-27 0
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 0
Bacillus_thuringiensis_BMB171 0
Bacillus_thuringiensis_serovar_finitimus_YBT-020 0
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 0
Bacillus_cereus_FRI-35 0
Bacillus_cereus_biovar_anthracis_str._CI 0
Bacillus_cereus_AH820 0
Bacillus_cereus_AH187 0
Bacillus_cereus_B4264 0
Bacillus_cereus_G9842 0
Bacillus_cereus_Q1 0
Bacillus_cereus_F837/76 0
Bacillus_cereus_NC7401 0
Bacillus_cereus_E33L 0
Bacillus_cereus_ATCC_14579 0
Bacillus_cereus_ATCC_10987 0
Bacillus_anthracis_str._H9401 0
Bacillus_anthracis_str._CDC_684 0
Bacillus_anthracis_str._'Ames_Ancestor' 0
Bacillus_anthracis_str._Sterne 0
Bacillus_anthracis_str._Ames 0
Bacillus_megaterium_WSH-002 0
Bacillus_megaterium_QM_B1551 0
Bacillus_coagulans_36D1 0
Salinibacter_ruber_DSM_13855 1
Rhodothermus_marinus_SG0.5JP17-172 0
Emticicia_oligotrophica_DSM_17448 0
Prevotella_dentalis_DSM_3688 0
Bacteroides_xylanisolvens_XB1A 1
Bacteroides_fragilis_638R 1
Bacteroides_fragilis_NCTC_9343 1
Nonlabens_dokdonensis_DSW-6 0
Chlamydia_pecorum_P787 1
Chlamydia_pecorum_W73 1
Chlamydia_pecorum_PV3056/3 1
Chlamydophila_pneumoniae_LPCoLN 1
Chlamydophila_pneumoniae_J138 1
Chlamydophila_pneumoniae_CWL029 1
Chlamydophila_pneumoniae_AR39 1
Chlamydia_psittaci_01DC12 1
Chlamydia_psittaci_WC 1
Chlamydia_psittaci_M56 1
Chlamydia_psittaci_WS/RT/E30 1
Chlamydia_psittaci_VS225 1
Chlamydia_psittaci_MN 1
Chlamydia_psittaci_GR9 1
Chlamydia_psittaci_84/55 1
Chlamydia_psittaci_08DC60 1
Chlamydia_psittaci_02DC15 1
Chlamydia_psittaci_C19/98 1
Chlamydia_psittaci_NJ1 1
Chlamydia_psittaci_CP3 1
Chlamydophila_psittaci_RD1 1
Chlamydia_psittaci_Mat116 1
Chlamydophila_psittaci_6BC 1
Chlamydophila_psittaci_6BC 1
Chlamydia_trachomatis_C/TW-3 1
Chlamydia_trachomatis_L2/434/Bu(f) 1
Chlamydia_trachomatis_L2/434/Bu(i) 1
Chlamydia_trachomatis_IU888 1
Chlamydia_trachomatis_IU824 1
Chlamydia_trachomatis_L2b/Canada2 1
Chlamydia_trachomatis_L2b/Canada1 1
Chlamydia_trachomatis_L3/404/LN 1
Chlamydia_trachomatis_L2b/Ams5 1
Chlamydia_trachomatis_L2b/Ams4 1
Chlamydia_trachomatis_L2b/Ams3 1
Chlamydia_trachomatis_L2b/Ams2 1
Chlamydia_trachomatis_L2b/Ams1 1
Chlamydia_trachomatis_L2b/795 1
Chlamydia_trachomatis_L2b/CV204 1
Chlamydia_trachomatis_L2b/LST 1
Chlamydia_trachomatis_L2b/UCH-2 1
Chlamydia_trachomatis_L2b/8200/07 1
Chlamydia_trachomatis_L2/25667R 1
Chlamydia_trachomatis_L1/224 1
Chlamydia_trachomatis_L1/115 1
Chlamydia_trachomatis_L1/440/LN 1
Chlamydia_trachomatis_K/SotonK1 1
Chlamydia_trachomatis_Ia/SotonIa3 1
Chlamydia_trachomatis_Ia/SotonIa1 1
Chlamydia_trachomatis_G/SotonG1 1
Chlamydia_trachomatis_F/SotonF3 1
Chlamydia_trachomatis_F/SW5 1
Chlamydia_trachomatis_F/SW4 1
Chlamydia_trachomatis_E/SotonE8 1
Chlamydia_trachomatis_E/SotonE4 1
Chlamydia_trachomatis_E/SW3 1
Chlamydia_trachomatis_D/SotonD6 1
Chlamydia_trachomatis_D/SotonD5 1
Chlamydia_trachomatis_D/SotonD1 1
Chlamydia_trachomatis_A/5291 1
Chlamydia_trachomatis_A/363 1
Chlamydia_trachomatis_RC-J/971 1
Chlamydia_trachomatis_RC-L2/55 1
Chlamydia_trachomatis_J/6276tet1 1
Chlamydia_trachomatis_RC-J/966 1
Chlamydia_trachomatis_RC-J(s)/122 1
Chlamydia_trachomatis_RC-F(s)/342 1
Chlamydia_trachomatis_RC-L2(s)/3 1
Chlamydia_trachomatis_RC-J/953 1
Chlamydia_trachomatis_RC-J943 1
Chlamydia_trachomatis_RC-Fs852 1
Chlamydia_trachomatis_RC-L2s46 1
Chlamydia_trachomatis_RC-F69 1
Chlamydia_trachomatis_L2c 1
Chlamydia_trachomatis_D-LC 1
Chlamydia_trachomatis_D-EC 1
Chlamydia_trachomatis_G/9301 1
Chlamydia_trachomatis_G/11074 1
Chlamydia_trachomatis_G/11222 1
Chlamydia_trachomatis_G/9768 1
Chlamydia_trachomatis_E/150 1
Chlamydia_trachomatis_E/11023 1
Chlamydia_trachomatis_B/TZ1A828/OT 1
Chlamydia_trachomatis_Sweden2 1
Chlamydia_trachomatis_E/Bour 1
Chlamydia_trachomatis_A2497 1
Chlamydia_trachomatis_A2497 1
Chlamydia_trachomatis_L2b/UCH-1/proctitis 1
Chlamydia_trachomatis_434/Bu 1
Chlamydia_trachomatis_A/HAR-13 1
Chlamydia_trachomatis_D/UW-3/CX 1
Singulisphaera_acidiphila_DSM_18658 2
Thermotoga_maritima_MSB8 0
Hydrogenobacter_thermophilus_TK-6 0
Leptospirillum_ferriphilum_ML-04 1
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 0
Fusobacterium_nucleatum_subsp._animalis_4_8 0
Acidithiobacillus_ferrooxidans_ATCC_23270 1
Bdellovibrio_bacteriovorus_str._Tiberius 0
Desulfocapsa_sulfexigens_DSM_10523 0
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 2
Desulfovibrio_vulgaris_RCH1 0
Desulfovibrio_vulgaris_str._'Miyazaki_F' 0
Desulfovibrio_vulgaris_str._Hildenborough 0
Geobacter_sp._M18 1
Geobacter_sulfurreducens_PCA 1
Sorangium_cellulosum_So0157-2 2
Anaeromyxobacter_sp._K 2
Anaeromyxobacter_dehalogenans_2CP-C 2
Myxococcus_stipitatus_DSM_14675 1
Burkholderia_phenoliruptrix_BR3459a 1
Ralstonia_pickettii_12J 1
Ralstonia_solanacearum_FQY_4 1
Ralstonia_solanacearum_Po82 1
Ralstonia_solanacearum_PSI07 1
Ralstonia_solanacearum_CMR15 1
Ralstonia_solanacearum_GMI1000 1
Burkholderia_sp._YI23 1
Burkholderia_sp._CCGE1003 1
Burkholderia_sp._CCGE1001 1
Burkholderia_sp._KJ006 1
Burkholderia_pseudomallei_MSHR305 1
Burkholderia_pseudomallei_NCTC_13179 1
Burkholderia_pseudomallei_BPC006 1
Burkholderia_pseudomallei_1026b 1
Burkholderia_pseudomallei_MSHR346 1
Burkholderia_pseudomallei_668 1
Burkholderia_pseudomallei_1710b 1
Burkholderia_pseudomallei_K96243 1
Burkholderia_mallei_NCTC_10229 1
Burkholderia_mallei_NCTC_10247 1
Burkholderia_mallei_ATCC_23344 1
Burkholderia_lata 1
Burkholderia_ambifaria_MC40-6 1
Burkholderia_cenocepacia_MC0-3 1
Burkholderia_cenocepacia_AU_1054 1
Burkholderia_multivorans_ATCC_17616 1
Variovorax_paradoxus_B4 1
Variovorax_paradoxus_EPS 1
Bordetella_pertussis_CS 1
Bordetella_parapertussis_18323 1
Bordetella_bronchiseptica_MO149 1
Bordetella_bronchiseptica_253 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1
Nitrosomonas_sp._AL212 0
Sulfuricella_denitrificans_skB26 1
Octadecabacter_antarcticus_307 0
Octadecabacter_arcticus_238 0
Rhodobacter_sphaeroides_KD131 1
Rhodobacter_sphaeroides_ATCC_17025 1
Rhodobacter_sphaeroides_2.4.1 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 0
Rhodospirillum_rubrum_ATCC_11170 2
Gluconacetobacter_diazotrophicus_PAl_5 1
Gluconobacter_oxydans_H24 1
Acetobacter_pasteurianus_386B 0
Acetobacter_pasteurianus_IFO_3283-12 1
Acetobacter_pasteurianus_IFO_3283-01-42C 1
Acetobacter_pasteurianus_IFO_3283-32 1
Acetobacter_pasteurianus_IFO_3283-26 1
Acetobacter_pasteurianus_IFO_3283-22 1
Acetobacter_pasteurianus_IFO_3283-07 1
Acetobacter_pasteurianus_IFO_3283-03 1
Methylobacterium_extorquens_DM4 1
Methylobacterium_extorquens_PA1 1
Sinorhizobium_fredii_USDA_257 1
Sinorhizobium_fredii_HH103 1
Sinorhizobium_meliloti_2011 1
Sinorhizobium_meliloti_GR4 1
Sinorhizobium_meliloti_Rm41 1
Sinorhizobium_meliloti_SM11 1
Sinorhizobium_meliloti_BL225C 1
Sinorhizobium_meliloti_1021 1
Rhizobium_etli_CFN_42 2
Rhizobium_etli_bv._mimosae_str._Mim1 2
Rhizobium_tropici_CIAT_899 0
Rhizobium_leguminosarum_bv._trifolii_WSM2304 1
Rhizobium_leguminosarum_bv._trifolii_WSM1325 1
Mesorhizobium_australicum_WSM2073 0
Oligotropha_carboxidovorans_OM5 1
Oligotropha_carboxidovorans_OM5 1
Rhodopseudomonas_palustris_DX-1 1
Rhodopseudomonas_palustris_TIE-1 1
Rhodopseudomonas_palustris_HaA2 1
Rhodopseudomonas_palustris_BisB5 1
Rhodopseudomonas_palustris_BisB18 1
Rhodopseudomonas_palustris_CGA009 1
Bradyrhizobium_sp._S23321 1
Bradyrhizobium_sp._BTAi1 1
Bradyrhizobium_oligotrophicum_S58 1
Bradyrhizobium_japonicum_USDA_6 1
Vibrio_sp._EJY3 0
Vibrio_parahaemolyticus_BB22OP 0
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 0
Vibrio_anguillarum_Listonella_anguillarum_M3 1
Vibrio_nigripulchritudo_VibrioScope 0
Vibrio_vulnificus_CMCP6 0
Vibrio_vulnificus_YJ016 0
Vibrio_cholerae_LMA3984-4 0
Vibrio_cholerae_M66-2 0
Vibrio_cholerae_O395 0
Vibrio_cholerae_IEC224 0
Vibrio_cholerae_O1_str._2010EL-1786 0
Vibrio_cholerae_MJ-1236 0
Shewanella_sp._W3-18-1 0
Shewanella_sp._ANA-3 0
Shewanella_baltica_BA175 0
Shewanella_baltica_OS678 0
Shewanella_baltica_OS117 0
Shewanella_baltica_OS223 0
Shewanella_baltica_OS195 0
Shewanella_baltica_OS155 0
Shewanella_sp._MR-7 0
Shewanella_putrefaciens_200 0
Glaciecola_psychrophila_170 0
Alteromonas_macleodii_str._'English_Channel_673' 1
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1
Alteromonas_macleodii_ATCC_27126 1
Stenotrophomonas_maltophilia_D457 1
Xanthomonas_citri_subsp._citri_Aw12879 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1
Xanthomonas_axonopodis_pv._citrumelo_F1 1
Xanthomonas_axonopodis_Xac29-1 1
Xanthomonas_oryzae_pv._oryzicola_BLS256 1
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1
Xanthomonas_campestris_pv._raphani_756C 1
Xanthomonas_campestris_pv._campestris_str._8004 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1
Thioalkalivibrio_nitratireducens_DSM_14787 1
Thioflavicoccus_mobilis_8321 1
Edwardsiella_tarda_C07-087 1
Edwardsiella_tarda_FL6-60 1
Rahnella_aquatilis_HX2 1
Serratia_marcescens_WW4 1
Pantoea_ananatis_LMG_5342 2
Pantoea_ananatis_PA13 2
Pantoea_ananatis_AJ13355 2
Erwinia_pyrifoliae_DSM_12163 1
Erwinia_amylovora_CFBP1430 1
Cronobacter_sakazakii_SP291 1
Cronobacter_sakazakii_ATCC_BAA-894 1
Raoultella_ornithinolytica_B6 1
Shigella_sonnei_53G 1
Shigella_flexneri_2002017 1
Shigella_flexneri_2a_str._2457T 1
Shigella_flexneri_2a_str._301 1
Shigella_dysenteriae_1617 1
Shigella_boydii_Sb227 1
Salmonella_bongori_N268-08 2
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 2
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 2
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 2
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 2
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 2
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 2
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 2
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 2
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 2
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 2
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 2
Salmonella_enterica_serovar_Bovismorbificans_genomics 2
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 2
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 2
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 2
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 2
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 2
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 2
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 2
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 2
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 2
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 2
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 2
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 2
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 2
Klebsiella_oxytoca_KCTC_1686 2
Klebsiella_pneumoniae_JM45 1
Klebsiella_pneumoniae_CG43 1
Klebsiella_pneumoniae_KCTC_2242 1
Klebsiella_pneumoniae_342 1
Klebsiella_pneumoniae_subsp._pneumoniae_1084 1
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 1
Enterobacter_aerogenes_EA1509E 1
Escherichia_coli_E24377A 1
Escherichia_coli_E._coli_PMV-1 1
Escherichia_coli_JJ1886 1
Escherichia_coli_LY180 1
Escherichia_coli_APEC_O78 1
Escherichia_coli_O7:K1_str._CE10 1
Escherichia_coli_O104:H4_str._2009EL-2050 1
Escherichia_coli_O104:H4_str._2009EL-2071 1
Escherichia_coli_O104:H4_str._2011C-3493 1
Escherichia_coli_NA114 1
Escherichia_coli_P12b 1
Escherichia_coli_str._'clone_D_i2' 1
Escherichia_coli_str._'clone_D_i14' 1
Escherichia_coli_UM146 1
Escherichia_coli_042 1
Escherichia_coli_Xuzhou21 1
Escherichia_coli_IHE3034 1
Escherichia_coli_UMNK88 1
Escherichia_coli_O83:H1_str._NRG_857C 1
Escherichia_coli_ABU_83972 1
Escherichia_coli_KO11FL 1
Escherichia_coli_KO11FL 1
Escherichia_coli_LF82 1
Escherichia_coli_ED1a 1
Escherichia_coli_IAI39 1
Escherichia_coli_UMN026 1
Escherichia_coli_55989 1
Escherichia_coli_S88 1
Escherichia_coli_IAI1 2
Escherichia_coli_W 1
Escherichia_coli_W 1
Escherichia_coli_DH1 1
Escherichia_coli_DH1 1
Escherichia_coli_ATCC_8739 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_SMS-3-5 1
Escherichia_coli_SE15 1
Escherichia_coli_SE11 1
Escherichia_coli_APEC_O1 1
Escherichia_coli_O103:H2_str._12009 1
Escherichia_coli_UTI89 1
Escherichia_coli_536 1
Escherichia_coli_HS 1
Escherichia_coli_ETEC_H10407 1
Escherichia_coli_O55:H7_str._RM12579 1
Escherichia_coli_O55:H7_str._CB9615 1
Escherichia_coli_O26:H11_str._11368 2
Escherichia_coli_CFT073 1
Escherichia_coli_O111:H-_str._11128 2
Escherichia_coli_O127:H6_str._E2348/69 1
Escherichia_coli_O157:H7_str._TW14359 1
Escherichia_coli_O157:H7_str._EC4115 1
Escherichia_coli_O157:H7_str._Sakai 1
Escherichia_coli_O157:H7_str._EDL933 1
Escherichia_coli_str._K-12_substr._MDS42 1
Escherichia_coli_BW2952 1
Escherichia_coli_str._K-12_substr._MG1655 1
Escherichia_coli_str._K-12_substr._W3110 1
Escherichia_coli_str._K-12_substr._DH10B 1
Escherichia_coli_B_str._REL606 1
Enterobacter_cloacae_SCF1 1
Enterobacter_cloacae_EcWSU1 2
Enterobacter_cloacae_subsp._cloacae_ENHKU01 2
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 2
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 2
Azotobacter_vinelandii_CA6 1
Azotobacter_vinelandii_CA 1
Pseudomonas_syringae_pv._phaseolicola_1448A 1
Pseudomonas_syringae_pv._syringae_B728a 1
Pseudomonas_stutzeri_CCUG_29243 1
Pseudomonas_stutzeri_DSM_10701 1
Pseudomonas_stutzeri_DSM_4166 1
Pseudomonas_stutzeri_RCH2 1
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 1
Pseudomonas_monteilii_SB3101 1
Pseudomonas_monteilii_SB3078 1
Pseudomonas_putida_H8234 1
Pseudomonas_putida_HB3267 1
Pseudomonas_putida_NBRC_14164 1
Pseudomonas_putida_DOT-T1E 1
Pseudomonas_putida_S16 1
Pseudomonas_putida_BIRD-1 1
Pseudomonas_putida_W619 1
Pseudomonas_putida_ND6 0
Pseudomonas_putida_KT2440 1
Pseudomonas_putida_GB-1 1
Pseudomonas_protegens_CHA0 1
Pseudomonas_poae_RE*1-1-14 1
Pseudomonas_fluorescens_F113 1
Pseudomonas_fluorescens_A506 1
Pseudomonas_fluorescens_R124 1
Pseudomonas_fluorescens_Pf0-1 1
Pseudomonas_mendocina_NK-01 1
Pseudomonas_aeruginosa_SCV20265 1
Pseudomonas_aeruginosa_MTB-1 1
Pseudomonas_aeruginosa_LES431 1
Pseudomonas_aeruginosa_RP73 1
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_PA1R 1
Pseudomonas_aeruginosa_PA1 1
Pseudomonas_aeruginosa_DK2 1
Pseudomonas_aeruginosa_NCGM2.S1 1
Pseudomonas_aeruginosa_M18 1
Pseudomonas_aeruginosa_LESB58 1
Pseudomonas_aeruginosa_PA7 1
Pseudomonas_aeruginosa_PAO1 1
Francisella_noatunensis_subsp._orientalis_LADL--07-285A 0
Francisella_tularensis_subsp._mediasiatica_FSC147 0
Francisella_tularensis_subsp._holarctica_F92 0
Francisella_tularensis_subsp._holarctica_FTNF002-00 0
Francisella_tularensis_subsp._holarctica_OSU18 0
Francisella_tularensis_subsp._holarctica_LVS 0
Francisella_tularensis_subsp._holarctica_FSC200 0
Francisella_tularensis_subsp._tularensis_TIGB03 0
Francisella_tularensis_subsp._tularensis_TI0902 0
Francisella_tularensis_subsp._tularensis_NE061598 0
Francisella_tularensis_subsp._tularensis_FSC198 0
Francisella_tularensis_subsp._tularensis_SCHU_S4 0
Francisella_cf._novicida_Fx1 0
Sulfolobus_acidocaldarius_SUSAZ 1
Sulfolobus_acidocaldarius_Ron12/I 1
Sulfolobus_acidocaldarius_N8 1
Thermococcus_sp._CL1 0
Thermococcus_litoralis_DSM_5473 0
Pyrococcus_furiosus_DSM_3638 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number
Sorex_araneus_69_1   (European shrew)   0
Gallus_gallus_69_2   (Chicken)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   0
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_69   (Vase tunicate)   0
Arabidopsis_thaliana_10   (Thale cress)   0

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   0
Ricinus_communis__(Early_assembly)   (Castor bean)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   0
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   0
Acholeplasma_laidlawii_PG-8A_(duplicate) 0
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 0
NCBI_plasmid_sequences_(Plasmids) 33
NCBI_2017_08_genome 55009
Protozoadb_2010_08_(Protozoadb) 2
Protein_Data_Bank_(all_PDB_sequenc) 4
TargetDB__(Targets) 12
STRING_v9.0.5_(STRING) 380
Uniprot_2018_03_genome 51036

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.