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Domain combinations for 81296,54001,54001,49309 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

81296 - E set domains
54001 - Cysteine proteinases
54001 - Cysteine proteinases
49309 - Transglutaminase, two C-terminal domains

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Tupaia_belangeri_76   (Northern tree shrew)   1
Vicugna_pacos_76_1   (Alpaca)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Sorex_araneus_76_1   (European shrew)   0
Erinaceus_europaeus_76   (Western European hedgehog)   0
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Gadus_morhua_76_1   (Atlantic cod)   0
Poecilia_formosa_76   (Amazon molly)   0
Crassostrea_gigas_22   (Pacific oyster)   0
Bombyx_mori_   (Domestic silkworm)   0
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   0
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   0

Longest transcript per gene
Genome     Number
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Tupaia_belangeri_69   (Northern tree shrew)   1
Vicugna_pacos_69_1   (Alpaca)   0
Felis_catus_69   (Domestic cat)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Sorex_araneus_69_1   (European shrew)   0
Erinaceus_europaeus_69   (Western European hedgehog)   0
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0

Others
Genome     Number
STRING_v9.0.5_(STRING) 0
NCBI_2017_08_genome 2
Uniprot_2018_03_genome 0

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