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  Home > SCOP hierarchy > Domain combination - 82185

Domain combinations for 82185 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   15
Pan_troglodytes_76_2.1.4   (Chimpanzee)   2
Gorilla_gorilla_76_3.1   (Western gorilla)   4
Pongo_abelii_76_2   (Sumatran orangutan)   3
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   2
Papio_anubis_76   (Olive baboon)   3
Macaca_mulatta_76_1   (Rhesus monkey)   5
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   8
Otolemur_garnettii_76_3   (Small-eared galago)   3
Microcebus_murinus_76_1   (Gray mouse lemur)   2
Rattus_norvegicus_76_5.0   (Norway rat)   3
Mus_musculus_76_38   (House mouse)   6
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   3
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   3
Cavia_porcellus_76_3   (Domestic guinea pig)   3
Oryctolagus_cuniculus_76_2   (Rabbit)   3
Ochotona_princeps_76   (American pika)   3
Tupaia_belangeri_76   (Northern tree shrew)   2
Sus_scrofa_76_10.2   (Pig)   3
Bos_taurus_76_3.1   (Cattle)   3
Ovis_aries_76_3.1   (Sheep)   3
Vicugna_pacos_76_1   (Alpaca)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   2
Mustela_putorius_furo_76_1.0   (Domestic ferret)   2
Ailuropoda_melanoleuca_76_1   (Giant panda)   3
Canis_familiaris_76_3.1   (Dog)   2
Felis_catus_76_6.2   (Domestic cat)   3
Equus_caballus_76_2   (Horse)   3
Myotis_lucifugus_76_2.0   (Little brown bat)   4
Pteropus_vampyrus_76_1   (Large flying fox)   2
Sorex_araneus_76_1   (European shrew)   2
Erinaceus_europaeus_76   (Western European hedgehog)   1
Procavia_capensis_76_1   (Cape rock hyrax)   1
Loxodonta_africana_76_3   (African savanna elephant)   3
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   4
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1
Macropus_eugenii_76_1.0   (Tammar wallaby)   3
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   2
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   3
Ornithorhynchus_anatinus_76_5   (Platypus)   7
Saccoglossus_kowalevskii_v3.0 9
Petromyzon_marinus_76_7.0   (Sea lamprey)   4
Meleagris_gallopavo_76_2   (Turkey)   2
Gallus_gallus_76_4   (Chicken)   2
Anas_platyrhynchos_76_1.0   (Mallard)   2
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   5
Ficedula_albicollis_76_1.0   (Collared flycatcher)   2
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   2
Anolis_carolinensis_76_2.0   (Green anole)   3
Xenopus_laevis_   (African clawed frog)   2
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_76_1   (Coelacanth)   3
Lepisosteus_oculatus_76   (Spotted gar)   3
Gadus_morhua_76_1   (Atlantic cod)   6
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   7
Takifugu_rubripes_76_4   (Torafugu)   6
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   2
Oryzias_latipes_76_1   (Japanese medaka)   3
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   4
Poecilia_formosa_76   (Amazon molly)   3
Oreochromis_niloticus_76_1.0   (Nile tilapia)   3
Astyanax_mexicanus_76   (Mexican tetra)   3
Danio_rerio_76_9   (Zebrafish)   4
Oikopleura_dioica 2
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_76   (Vase tunicate)   2
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   6
Adineta_vaga 12
Octopus_bimaculoides_280 5
Crassostrea_gigas_22   (Pacific oyster)   4
Lottia_gigantea_   (Owl limpet)   4
Helobdella_robusta_ 12
Capitella_sp._I_ 3
Danaus_plexippus_OGS1.0   (Monarch butterfly)   2
Heliconius_melpomene_   (Postman butterfly)   0
Bombyx_mori_   (Domestic silkworm)   3
Nasonia_vitripennis_   (Jewel wasp)   1
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   2
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   2
Linepithema_humile_v1.1   (Argentine ant)   4
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1
Atta_cephalotes_v1.1 3
Camponotus_floridanus_v3.3   (Florida carpenter ant)   2
Lucilia_cuprina   (Australian sheep blowfly)   0
Drosophila_grimshawi_1.3 0
Drosophila_willistoni_1.3 0
Drosophila_pseudoobscura_2.13 1
Drosophila_persimilis_1.3 1
Drosophila_suzukii 0
Drosophila_yakuba_1.3 0
Drosophila_simulans_1.3 0
Drosophila_sechellia_1.3 0
Drosophila_melanogaster_76_5   (Fruit fly)   0
Drosophila_erecta_1.3 0
Drosophila_ananassae_1.3 0
Drosophila_virilis_1.2 2
Drosophila_mojavensis_1.3 0
Megaselia_scalaris_22 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1
Anopheles_darlingi_22   (American malaria mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   1
Tribolium_castaneum_3.0   (Red flour beetle)   3
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1
Acyrthosiphon_pisum_   (Pea aphid)   1
Rhodnius_prolixus_22 3
Daphnia_pulex_   (Common water flea)   2
Strigamia_maritima_22 2
Sarcoptes_scabiei 0
Tetranychus_urticae_   (Two-spotted spider mite)   0
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   0
Pristionchus_pacificus_ 1
Meloidogyne_incognita_   (Southern root-knot nematode)   1
Meloidogyne_hapla_ 0
Onchocerca_volvulus_22 0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   0
Caenorhabditis_japonica_ 0
Caenorhabditis_brenneri_ 0
Caenorhabditis_remanei_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   0
Caenorhabditis_briggsae_2 0
Trichinella_spiralis_22 1
Hymenolepis_microstoma_ 0
Echinococcus_multilocularis_ 0
Echinococcus_granulosus_ 0
Taenia_solium_   (Pork tapeworm)   2
Schistosoma_mansoni_ 2
Mnemiopsis_leidyi   (Sea walnut)   2
Acropora_digitifera_v1.0 4
Nematostella_vectensis_1.0   (Starlet sea anemone)   11
Hydra_vulgaris 7
Amphimedon_queenslandica 2
Trichoplax_adhaerens_ 2
Proterospongia_sp._ATCC_50818_ 7
Monosiga_brevicollis_ 2
Sphaeroforma_arctica_JP610_ 0
Capsaspora_owczarzaki_ATCC_30864_ 0
Mortierella_verticillata_NRRL_6337_ 0
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 0
Sphaerobolus_stellatus_v1.0 0
Piloderma_croceum_F_1598_v1.0 0
Hydnomerulius_pinastri_v2.0 0
Pisolithus_tinctorius_Marx_270_v1.0 0
Pleurotus_ostreatus_   (Oyster mushroom)   0
Laccaria_bicolor_S238N-H82_ 0
Schizophyllum_commune_ 0
Gloeophyllum_trabeumv1.0 0
Trametes_versicolor_v1.0 0
Sporotrichum_thermophile_ATCC_42464_ 0
Chaetomium_globosum_CBS_148.51_ 0
Verticillium_dahliae_VdLs.17_ 0
Fusarium_graminearum_ 0
Fusarium_verticillioides_7600_ 0
Trichoderma_asperellum_CBS_433.97_v1.0 0
Trichoderma_atroviride_ 0
Trichoderma_virens_Gv29-8_ 0
Trichoderma_harzianum_CBS_226.95_v1.0 0
Botrytis_cinerea_B05.10_ 0
Sclerotinia_sclerotiorum_ 0
Didymella_exigua_CBS_183.55_v1.0 0
Leptosphaeria_maculans_22 0
Setosphaeria_turcica_v1.0 0
Cochliobolus_miyabeanus_ATCC_44560_v1.0 0
Cochliobolus_victoriae_FI3_v1.0 0
Cochliobolus_carbonum_26-R-13_v1.0 0
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   0
Alternaria_brassicicola_ 0
Cochliobolus_lunatus_m118_v2.0 0
Pyrenophora_teres_f._teres_22 0
Pyrenophora_tritici-repentis_ 0
Stagonospora_nodorum_ 0
Mycosphaerella_graminicola_IPO323_ 0
Zasmidium_cellare_ATCC_36951_v1.0 0
Dothistroma_septosporum 0
Septoria_musiva_v1.0 0
Mycosphaerella_fijiensis_CIRAD86_ 0
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 0
Paracoccidioides_brasiliensis_Pb18_ 0
Coccidioides_posadasii_RMSCC_3488_ 0
Coccidioides_immitis_RS_ 0
Ajellomyces_dermatitidis_SLH14081_ 0
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 0
Microsporum_canis_CBS_113480_ 0
Trichophyton_equinum_CBS_127.97_ 0
Arthroderma_benhamiae_CBS_112371_ 0
Trichophyton_tonsurans_CBS_112818_ 0
Trichophyton_rubrum_CBS_118892_ 0
Uncinocarpus_reesii_1704_ 0
Aspergillus_zonatus_v1.0 0
Penicillium_chrysogenum_Wisconsin_54-1255_ 0
Penicillium_chrysogenum_v1.0 0
Aspergillus_acidus_v1.0 0
Aspergillus_fumigatus_Af293 0
Aspergillus_brasiliensis_v1.0 0
Aspergillus_nidulans_FGSC_A4_ 0
Aspergillus_sydowii_v1.0 0
Aspergillus_versicolor_v1.0 0
Aspergillus_glaucus 0
Aspergillus_carbonarius_ITEM_5010_ 0
Neosartorya_fischeri_NRRL_181_ 0
Aspergillus_terreus_NIH2624_ 0
Aspergillus_tubingensis_v1.0 0
Aspergillus_wentii_v1.0 0
Aspergillus_oryzae_RIB40_ 0
Aspergillus_niger_22 0
Aspergillus_niger_ATCC_1015_ 0
Aspergillus_flavus_NRRL3357_ 0
Aspergillus_clavatus_NRRL_1_ 0
Penicillium_marneffei_ATCC_18224_ 0
Candida_dubliniensis_CD36_ 0
Candida_tropicalis_MYA-3404_ 0
Candida_albicans_SC5314 0
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 0
Yarrowia_lipolytica_CLIB122 0
Catenaria_anguillulae_PL171_v1.0 1
Allomyces_macrogynus_ATCC_38327_ 0
Spizellomyces_punctatus_DAOM_BR117_ 1
Dictyostelium_discoideum 0
Dictyostelium_purpureum_ 0
Entamoeba_dispar_1.2 0
Entamoeba_invadens_1.2 0
Entamoeba_histolytica_1 0
Selaginella_moellendorffii_ 8
Pinus_taeda   (Loblolly pine)   0
Picea_abies   (Norway spruce)   0
Eucalyptus_grandis_v201   (Rose gum)   2
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Gossypium_raimondii_v221 1
Citrus_clementina_v165 0
Citrus_sinensis_v154   (Sweet orange)   1
Thellungiella_halophila_v173 1
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   0
Capsella_rubella_v183 0
Arabidopsis_lyrata_   (Lyrate rockcress)   0
Arabidopsis_thaliana_10   (Thale cress)   0
Carica_papaya_   (Papaya)   0
Medicago_truncatula_   (Barrel medic)   2
Phaseolus_vulgaris_v186   (French bean)   0
Glycine_max_v109   (Soybean)   0
Cucumis_sativus_v122   (Cucumber)   0
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   0
Prunus_persica_v139   (Peach)   0
Linum_usitatissimum_v200   (Flax)   0
Manihot_esculenta_v147   (Cassava)   0
Populus_trichocarpa_v156   (Black cottonwood)   3
Vitis_vinifera_   (Wine grape)   0
Mimulus_guttatus_v140   (Spotted monkey flower)   0
Solanum_lycopersicum_v.2.3   (Tomato)   1
Solanum_tuberosum_   (Potato)   0
Actinidia_chinensis_Hongyang_ 0
Aquilegia_coerulea_v195 0
Triticum_urartu_22 1
Triticum_aestivum_22   (Bread wheat)   9
Aegilops_tauschii_22 0
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_barthii_22   (African wild rice)   0
Oryza_meridionalis_22 0
Oryza_glumaepatula_22 0
Oryza_glaberrima   (African rice)   0
Oryza_punctata_22 0
Oryza_nivara_22 0
Oryza_brachyantha_22   (Malo sina)   0
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   0
Oryza_sativa_v193   (Rice)   0
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1
Panicum_virgatum_v202   (Switchgrass)   1
Setaria_italica_v164   (Foxtail millet)   0
Zea_mays_subsp._mays_   (Maize)   3
Zea_mays_v181   (Maize)   2
Sorghum_bicolor_   (Sorghum)   0
Musa_balbisiana   (Balbis banana)   2
Musa_acuminata_22   (Wild Malaysian banana)   0
Amborella_trichopoda_22 0
Physcomitrella_patens 2
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Asterochloris_sp._Cgr/DA1pho_v1.0 5
Chlorella_variabilis_sp._NC64A_ 3
Chlorella_vulgaris_ 1
Volvox_carteri_f._nagariensis_ 2
Volvox_carteri_v199 1
Chlamydomonas_reinhardtii_4.0 2
Ostreococcus_sp._RCC809_ 1
Ostreococcus_lucimarinus_CCE9901_ 0
Ostreococcus_tauri_ 0
Bathycoccus_prasinos_ 0
Micromonas_sp._RCC299_ 2
Micromonas_pusilla_CCMP1545_v3.0 2
Cyanidioschyzon_merolae_strain_10D_22 0
Cyanidioschyzon_merolae 0
Porphyridium_purpureum_02_2012 0
Thecamonas_trahens_ATCC_50062_ 1
Bigelowiella_natans_CCMP2755_22 2
Giardia_lamblia_2.3 1
Cyanophora_paradoxa_ 7
Leishmania_mexicana_2.4 0
Leishmania_major_strain_Friedlin_ 0
Leishmania_infantum_JPCM5_2.4 0
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1
Trypanosoma_vivax_ 1
Trypanosoma_cruzi_strain_CL_Brener 0
Trypanosoma_congolense_2.4 0
Trypanosoma_brucei_gambiense_v4.1 1
Trypanosoma_brucei_TREU927_v4.1 1
Ectocarpus_siliculosus 2
Aureococcus_anophagefferens_ 9
Albugo_laibachii_22 2
Pythium_iwayamai_DAOM_BR242034_22 0
Pythium_arrhenomanes_ATCC_12531_22 1
Pythium_ultimum_v1.7-2 2
Pythium_aphanidermatum_DAOM_BR444_22 1
Pythium_irregulare_DAOM_BR486_22 2
Pythium_vexans_DAOM_BR484_22 2
Phytophthora_ramorum_1.1   (Sudden oak death agent)   2
Phytophthora_sojae_1.1 3
Phytophthora_infestans_T30-4_ 2
Phytophthora_capsici_ 5
Hyaloperonospora_arabidopsidis_22 0
Phaeodactylum_tricornutumCCAP_1055/1 2
Fragilariopsis_cylindrus 4
Thalassiosira_pseudonana_CCMP1335 5
Perkinsus_marinus_ATCC_50983_ 3
Paramecium_tetraurelia_ 12
Tetrahymena_thermophila_SB210_1_ 1
Ichthyophthirius_multifiliis_strain_G5_ 7
Cryptosporidium_hominis 0
Cryptosporidium_muris 0
Cryptosporidium_parvum_Iowa_II 0
Neospora_caninum 0
Toxoplasma_gondii_VEG 2
Toxoplasma_gondii_ME49 2
Toxoplasma_gondii_GT1 3
Babesia_bovis_T2Bo_ 0
Theileria_parva__ 0
Theileria_annulata 0
Plasmodium_falciparum_3D7_ 1
Plasmodium_vivax_SaI-1_7.0 1
Plasmodium_knowlesi_strain_H_ 1
Plasmodium_yoelii_ssp._yoelii_1_ 1
Plasmodium_chabaudi_ 2
Plasmodium_berghei_ANKA_ 1
Symbiodinium_minutum_clade_B1_v1.2 9
Naegleria_gruberi_ 6
Trichomonas_vaginalis_ 3
Guillardia_theta_CCMP2712_v1.0_ 30
Emiliania_huxleyi_CCMP1516_ 35
Synechocystis_sp._PCC_6803 0
Thermosynechococcus_sp._NK55 0
Thermosynechococcus_elongatus_BP-1 0
Synechococcus_sp._PCC_6312 0
Microcoleus_sp._PCC_7113 0
Trichodesmium_erythraeum_IMS101 0
Geitlerinema_sp._PCC_7407 0
Cyanothece_sp._PCC_8802 0
Rivularia_sp._PCC_7116 0
Calothrix_sp._PCC_7507 0
Mycoplasma_suis_KI3806 0
Mycoplasma_fermentans_M64 0
Eggerthella_lenta_DSM_2243 0
Atopobium_parvulum_DSM_20469 0
Ilumatobacter_coccineus 0
Blastococcus_saxobsidens_DD2 0
Frankia_sp._EAN1pec 1
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 0
Streptomyces_coelicolor_A3(2) 0
Streptomyces_avermitilis_MA-4680 3
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Saccharopolyspora_erythraea_NRRL_2338 1
Salinispora_arenicola_CNS-205 2
Nocardia_farcinica_IFM_10152 1
Corynebacterium_urealyticum_DSM_7109 0
Jonesia_denitrificans_DSM_20603 0
Rothia_dentocariosa_ATCC_17931 0
Renibacterium_salmoninarum_ATCC_33209 1
Herpetosiphon_aurantiacus_DSM_785 0
Anaerococcus_prevotii_DSM_20548 0
Finegoldia_magna_ATCC_29328 0
Acidaminococcus_intestini_RyC-MR95 0
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 0
Eubacterium_siraeum 0
Clostridium_cellulolyticum_H10 0
Clostridium_thermocellum_ATCC_27405 1
Ruminococcus_bromii 0
Ruminococcus_albus_7 0
Oscillibacter_valericigenes_Sjm18-20 0
butyrate-producing_bacterium_SS3/4 0
Desulfosporosinus_acidiphilus_SJ4 0
Desulfotomaculum_ruminis_DSM_2154 0
Acetobacterium_woodii_DSM_1030 1
Clostridium_difficile_630 0
Clostridium_saccharolyticum_WM1 0
Clostridium_lentocellum_DSM_5427 0
Eubacterium_rectale_M104/1 0
Eubacterium_rectale_ATCC_33656 0
Roseburia_hominis_A2-183 0
Roseburia_intestinalis 0
Butyrivibrio_proteoclasticus_B316 0
Syntrophothermus_lipocalidus_DSM_12680 0
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 1
Clostridium_ljungdahlii_DSM_13528 0
Clostridium_kluyveri_DSM_555 0
Clostridium_beijerinckii_NCIMB_8052 2
Clostridium_tetani_E88 1
Clostridium_botulinum_A_str._ATCC_3502 0
Clostridium_acetobutylicum_ATCC_824 0
Caldicellulosiruptor_lactoaceticus_6A 0
Caldicellulosiruptor_saccharolyticus_DSM_8903 0
Caldicellulosiruptor_bescii_DSM_6725 0
Thermodesulfobium_narugense_DSM_14796 0
Carnobacterium_sp._17-4 1
Carnobacterium_sp._WN1359 1
Tetragenococcus_halophilus_NBRC_12172 0
Enterococcus_hirae_ATCC_9790 0
Oenococcus_oeni_PSU-1 0
Lactobacillus_johnsonii_FI9785 0
Lactobacillus_sakei_subsp._sakei_23K 1
Lactobacillus_reuteri_DSM_20016 0
Lactobacillus_plantarum_JDM1 1
Lactobacillus_brevis_ATCC_367 0
Pediococcus_claussenii_ATCC_BAA-344 0
Pediococcus_pentosaceus_ATCC_25745 0
Streptococcus_sp._I-P16 1
Streptococcus_sp._I-G2 1
Streptococcus_intermedius_JTH08 0
Streptococcus_gallolyticus_UCN34 1
Streptococcus_pseudopneumoniae_IS7493 1
Streptococcus_pasteurianus_ATCC_43144 1
Streptococcus_equi_subsp._equi_4047 1
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 1
Streptococcus_infantarius_subsp._infantarius_CJ18 1
Streptococcus_macedonicus_ACA-DC_198 1
Streptococcus_mitis_B6 1
Streptococcus_uberis_0140J 1
Streptococcus_parauberis_KCTC_11537 1
Streptococcus_parasanguinis_ATCC_15912 1
Streptococcus_pyogenes_str._Manfredo 1
Streptococcus_pneumoniae_P1031 1
Streptococcus_agalactiae_A909 1
Streptococcus_mutans_NN2025 1
Streptococcus_thermophilus_LMD-9 1
Streptococcus_suis_P1/7 0
Streptococcus_sanguinis_SK36 1
Streptococcus_salivarius_57.I 1
Streptococcus_oralis_Uo5 1
Streptococcus_gordonii_str._Challis_substr._CH1 1
Exiguobacterium_sp._AT1b 0
Brevibacillus_brevis_NBRC_100599 1
Paenibacillus_terrae_HPL-003 0
Paenibacillus_mucilaginosus_3016 0
Paenibacillus_polymyxa_M1 0
Bacillus_selenitireducens_MLS10 0
Lysinibacillus_sphaericus_C3-41 0
Oceanobacillus_iheyensis_HTE831 1
Bacillus_subtilis_subsp._subtilis_str._168 1
Bacillus_thuringiensis_str._Al_Hakam 0
Bacillus_cereus_03BB102 0
Bacillus_anthracis_str._A0248 0
Bacillus_cellulosilyticus_DSM_2522 0
Bacillus_megaterium_DSM_319 0
Staphylococcus_lugdunensis_HKU09-01 0
Staphylococcus_carnosus_subsp._carnosus_TM300 0
Candidatus_Cloacamonas_acidaminovorans 1
Melioribacter_roseus_P3M 0
Ignavibacterium_album_JCM_16511 0
Haliscomenobacter_hydrossis_DSM_1100 1
Saprospira_grandis_str._Lewin 1
Niastella_koreensis_GR20-10 0
Chitinophaga_pinensis_DSM_2588 2
Flexibacter_litoralis_DSM_6794 5
Belliella_baltica_DSM_15883 0
Cyclobacterium_marinum_DSM_745 2
Marivirga_tractuosa_DSM_4126 1
Fibrella_aestuarina 1
Leadbetterella_byssophila_DSM_17132 0
Dyadobacter_fermentans_DSM_18053 0
Cytophaga_hutchinsonii_ATCC_33406 2
Spirosoma_linguale_DSM_74 0
Runella_slithyformis_DSM_19594 1
Parabacteroides_distasonis_ATCC_8503 1
Tannerella_forsythia_ATCC_43037 0
Paludibacter_propionicigenes_WB4 0
Odoribacter_splanchnicus_DSM_20712 0
Prevotella_melaninogenica_ATCC_25845 0
Prevotella_intermedia_17 0
Prevotella_denticola_F0289 1
Prevotella_ruminicola_23 0
Alistipes_finegoldii_DSM_17242 0
Bacteroides_salanitronis_DSM_18170 0
Bacteroides_helcogenes_P_36-108 0
Bacteroides_vulgatus_ATCC_8482 0
Bacteroides_thetaiotaomicron_VPI-5482 0
Bacteroides_fragilis_YCH46 0
Pedobacter_saltans_DSM_12145 0
Solitalea_canadensis_DSM_3403 1
Pedobacter_heparinus_DSM_2366 1
Sphingobacterium_sp._21 0
Fluviicola_taffensis_DSM_16823 0
Owenweeksia_hongkongensis_DSM_17368 2
Zunongwangia_profunda_SM-A87 1
Krokinobacter_sp._4H-3-7-5 3
Gramella_forsetii_KT0803 1
Lacinutrix_sp._5H-3-7-4 3
Maribacter_sp._HTCC2170 1
Robiginitalea_biformata_HTCC2501 1
Croceibacter_atlanticus_HTCC2559 1
Aequorivita_sublithincola_DSM_14238 2
Zobellia_galactanivorans 3
Muricauda_ruestringensis_DSM_13258 1
Cellulophaga_algicola_DSM_14237 3
Cellulophaga_lytica_DSM_7489 3
Flavobacteriaceae_bacterium_3519-10 1
Polaribacter_sp._MED152 4
Ornithobacterium_rhinotracheale_DSM_15997 0
Capnocytophaga_canimorsus_Cc5 0
Capnocytophaga_ochracea_DSM_7271 0
Flavobacterium_indicum_GPTSA100-9 2
Flavobacterium_psychrophilum_JIP02/86 1
Flavobacterium_branchiophilum_FL-15 1
Flavobacterium_columnare_ATCC_49512 1
Flavobacterium_johnsoniae_UW101 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Waddlia_chondrophila_WSU_86-1044 0
Candidatus_Protochlamydia_amoebophila_UWE25 0
Parachlamydia_acanthamoebae_UV-7 2
Simkania_negevensis_Z 0
Chlamydophila_pecorum_E58 0
Chlamydia_muridarum_Nigg 0
Chlamydophila_pneumoniae_TW-183 0
Chlamydophila_caviae_GPIC 0
Chlamydophila_felis_Fe/C-56 0
Chlamydophila_abortus_S26/3 0
Chlamydia_psittaci_01DC11 0
Chlamydia_trachomatis_B/Jali20/OT 0
Planctomyces_brasiliensis_DSM_5305 0
Pirellula_staleyi_DSM_6068 0
Coraliomargarita_akajimensis_DSM_45221 0
Akkermansia_muciniphila_ATCC_BAA-835 0
Turneriella_parva_DSM_21527 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 0
Leptospira_interrogans_serovar_Lai_str._IPAV 3
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 4
Brachyspira_murdochii_DSM_12563 0
Borrelia_turicatae_91E135 0
Spirochaeta_smaragdinae_DSM_11293 0
Sphaerochaeta_globus_str._Buddy 1
Spirochaeta_caldaria_DSM_7334 0
Treponema_succinifaciens_DSM_2489 0
Calditerrivibrio_nitroreducens_DSM_19672 0
Thermotoga_neapolitana_DSM_4359 0
Thermovibrio_ammonificans_HB-1 0
Elusimicrobium_minutum_Pei191 0
Streptobacillus_moniliformis_DSM_12112 0
Sebaldella_termitidis_ATCC_33386 1
Leptotrichia_buccalis_C-1013-b 0
Ilyobacter_polytropus_DSM_2926 0
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 5
Bdellovibrio_bacteriovorus_HD100 0
Sulfurospirillum_deleyianum_DSM_6946 1
Sulfurospirillum_barnesii_SES-3 1
Sulfurimonas_autotrophica_DSM_16294 0
Helicobacter_hepaticus_ATCC_51449 1
Helicobacter_cinaedi_PAGU611 1
Sulfurovum_sp._NBC37-1 1
Desulfobacca_acetoxidans_DSM_11109 0
Syntrophus_aciditrophicus_SB 0
Desulfomonile_tiedjei_DSM_6799 0
Syntrophobacter_fumaroxidans_MPOB 0
Desulfurivibrio_alkaliphilus_AHT2 0
Desulfotalea_psychrophila_LSv54 0
Desulfatibacillum_alkenivorans_AK-01 0
Desulfovibrio_alaskensis_G20 0
Desulfovibrio_salexigens_DSM_2638 0
Geobacter_daltonii_FRC-32 0
Haliangium_ochraceum_DSM_14365 0
Sorangium_cellulosum_'So_ce_56' 0
Anaeromyxobacter_sp._Fw109-5 1
Anaeromyxobacter_dehalogenans_2CP-1 1
Stigmatella_aurantiaca_DW4/3-1 0
Corallococcus_coralloides_DSM_2259 2
Myxococcus_xanthus_DK_1622 1
Myxococcus_fulvus_HW-1 1
Dechloromonas_aromatica_RCB 0
Chromobacterium_violaceum_ATCC_12472 0
Neisseria_meningitidis_alpha14 1
Neisseria_meningitidis_FAM18 1
Neisseria_lactamica_020-06 2
Neisseria_gonorrhoeae_NCCP11945 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 0
Burkholderia_phymatum_STM815 0
Ralstonia_eutropha_JMP134 0
Cupriavidus_metallidurans_CH34 0
Ralstonia_eutropha_H16 0
Burkholderia_sp._RPE64 1
Burkholderia_sp._CCGE1002 0
Burkholderia_thailandensis_E264 0
Burkholderia_vietnamiensis_G4 0
Burkholderia_gladioli_BSR3 0
Ramlibacter_tataouinensis_TTB310 0
Polaromonas_naphthalenivorans_CJ2 0
Variovorax_paradoxus_S110 0
Herminiimonas_arsenicoxydans 0
Collimonas_fungivorans_Ter331 0
Herbaspirillum_seropedicae_SmR1 1
Bordetella_avium_197N 0
Bordetella_parapertussis_12822 0
Bordetella_bronchiseptica_RB50 0
Methylotenera_versatilis_301 2
Magnetococcus_marinus_MC-1 0
Sphingobium_sp._SYK-6 0
Hirschia_baltica_ATCC_49814 0
Dinoroseobacter_shibae_DFL_12 0
Phaeobacter_gallaeciensis_2.10 0
Jannaschia_sp._CCS1 0
Ruegeria_sp._TM1040 0
Ruegeria_pomeroyi_DSS-3 0
Ketogulonicigenium_vulgare_Y25 0
Ketogulonigenium_vulgarum_WSH-001 0
Roseobacter_litoralis_Och_149 0
Roseobacter_denitrificans_OCh_114 0
Rhodobacter_sphaeroides_ATCC_17029 0
Rhodobacter_capsulatus_SB_1003 0
Paracoccus_denitrificans_PD1222 0
Magnetospirillum_magneticum_AMB-1 0
Azospirillum_lipoferum_4B 0
Azospirillum_sp._B510 0
Azospirillum_brasilense_Sp245 0
alpha_proteobacterium_HIMB5 2
Methylobacterium_sp._4-46 0
Parvibaculum_lavamentivorans_DS-1 0
Sinorhizobium_medicae_WSM419 0
Sinorhizobium_meliloti_AK83 0
Mesorhizobium_opportunistum_WSM2075 0
Mesorhizobium_loti_MAFF303099 0
Methylocystis_sp._SC2 0
Saccharophagus_degradans_2-40 0
Cellvibrio_japonicus_Ueda107 0
Haemophilus_somnus_129PT 1
Haemophilus_parainfluenzae_T3T1 1
Aeromonas_veronii_B565 0
Aeromonas_salmonicida_subsp._salmonicida_A449 0
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 0
Aliivibrio_salmonicida_LFI1238 1
Vibrio_fischeri_MJ11 1
Vibrio_harveyi_ATCC_BAA-1116 0
Vibrio_splendidus_LGP32 1
Idiomarina_loihiensis_L2TR 0
Shewanella_piezotolerans_WP3 0
Shewanella_loihica_PV-4 0
Shewanella_halifaxensis_HAW-EB4 0
Shewanella_pealeana_ATCC_700345 1
Shewanella_oneidensis_MR-1 0
Shewanella_baltica_OS185 0
Shewanella_woodyi_ATCC_51908 1
Shewanella_sp._MR-4 0
Shewanella_amazonensis_SB2B 0
Shewanella_putrefaciens_CN-32 0
Pseudoalteromonas_atlantica_T6c 0
Glaciecola_sp._4H-3-7+YE-5 0
Glaciecola_nitratireducens_FR1064 0
Marinobacter_adhaerens_HP15 0
Marinobacter_hydrocarbonoclasticus_ATCC_49840 0
Marinobacter_aquaeolei_VT8 0
Alteromonas_sp._SN2 0
Kangiella_koreensis_DSM_16069 0
Hahella_chejuensis_KCTC_2396 0
Alcanivorax_borkumensis_SK2 0
Marinomonas_sp._MWYL1 1
Methylomonas_methanica_MC09 0
Nitrosococcus_halophilus_Nc4 0
Nitrosococcus_oceani_ATCC_19707 0
Coxiella_burnetii_Dugway_5J108-111 0
Legionella_longbeachae_NSW150 0
Legionella_pneumophila_str._Corby 0
gamma_proteobacterium_HdN1 1
Providencia_stuartii_MRSN_2154 1
Yersinia_pseudotuberculosis_IP_31758 0
Yersinia_pestis_Pestoides_F 0
Pectobacterium_atrosepticum_SCRI1043 0
Cronobacter_turicensis_z3032 1
Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 0
Candidatus_Blochmannia_floridanus 0
Shigella_flexneri_5_str._8401 0
Salmonella_bongori_NCTC_12419 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 0
Enterobacter_sp._638 1
Citrobacter_rodentium_ICC168 1
Azotobacter_vinelandii_DJ 1
Pseudomonas_sp._TKP 0
Pseudomonas_sp._UW4 0
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1
Pseudomonas_entomophila_L48 0
Pseudomonas_syringae_pv._tomato_str._DC3000 0
Pseudomonas_stutzeri_A1501 0
Pseudomonas_fulva_12-X 0
Pseudomonas_putida_F1 0
Pseudomonas_protegens_Pf-5 0
Pseudomonas_fluorescens_SBW25 0
Pseudomonas_mendocina_ymp 0
Pseudomonas_aeruginosa_UCBPP-PA14 1
Pseudomonas_sp._VLB120 0
Cycloclasticus_sp._P1 1
Metallosphaera_cuprina_Ar-4 0
Methanosarcina_acetivorans_C2A 0
Methanospirillum_hungatei_JF-1 0
Haloterrigena_turkmenica_DSM_5511 0
Methanocaldococcus_jannaschii_DSM_2661 0
Methanothermobacter_marburgensis_str._Marburg 0
Methanobrevibacter_ruminantium_M1 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   9
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   0
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   2
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0
Paracoccidioides_brasiliensis_Pb01_ 0
Paracoccidioides_brasiliensis_Pb03_ 0
Coccidioides_posadasii_str._Silveira_ 0
Coccidioides_immitis_RMSCC_3703_ 0
Coccidioides_immitis_RMSCC_2394_ 0
Coccidioides_immitis_H538.4_ 0
Ajellomyces_dermatitidis_ER-3_ 0
Histoplasma_capsulatum_H143 0
Histoplasma_capsulatum_H88 0
Histoplasma_capsulatum_G186AR 0
Aspergillus_fumigatus_A1163_ 0
Candida_albicans_WO-1_ 0
Batrachochytrium_dendrobatidis_JEL423_ 4
Batrachochytrium_dendrobatidis_JAM81_ 4
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0
Hordeum_vulgare_22   (Domesticated barley)   4
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Trypanosoma_brucei_Lister_427_v4.1 1
Neospora_caninum_Nc-Liverpool_6.2 0
Plasmodium_falciparum_HB3_ 1
Plasmodium_falciparum_Dd2_ 0
Chamaesiphon_minutus_PCC_6605 0
Synechocystis_sp._PCC_6803_substr._PCC-P 0
Synechocystis_sp._PCC_6803_substr._PCC-N 0
Synechocystis_sp._PCC_6803_substr._GT-I 0
Synechocystis_sp._PCC_6803 0
Synechococcus_sp._PCC_7002 0
Prochlorococcus_marinus_str._MIT_9215 0
Crinalium_epipsammum_PCC_9333 1
Oscillatoria_nigro-viridis_PCC_7112 0
Oscillatoria_acuminata_PCC_6304 0
Arthrospira_platensis_NIES-39 0
Cyanothece_sp._PCC_7425 0
Cyanothece_sp._PCC_7424 0
Cyanothece_sp._PCC_8801 0
Cyanobacterium_aponinum_PCC_10605 0
Cyanobacterium_stanieri_PCC_7202 0
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 0
Stanieria_cyanosphaera_PCC_7437 0
Calothrix_parietina_Calothrix_sp._PCC_6303 0
Candidatus_Phytoplasma_australiense_Strawberry_lethal_yellows_phytoplasma_(CPA)_str._NZSb11 0
Candidatus_Phytoplasma_australiense 0
Mycoplasma_suis_str._Illinois 0
Mycoplasma_bovis_PG45 0
Mycoplasma_fermentans_PG18 0
Mycoplasma_agalactiae 0
Nocardiopsis_alba_ATCC_BAA-2165 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Nocardia_brasiliensis_ATCC_700358 1
Mycobacterium_sp._JDM601 0
Corynebacterium_urealyticum_DSM_7111 0
Eubacterium_siraeum_V10Sc8a 0
Clostridium_acidurici_9a 0
Clostridium_difficile_BI1 0
Clostridium_difficile_R20291 0
Clostridium_difficile_CD196 0
Coprococcus_catus_GD/7 0
Roseburia_intestinalis_XB6B4 0
Clostridium_autoethanogenum_DSM_10061 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 0
Clostridium_kluyveri_NBRC_12016 0
Clostridium_tetani_genome_12124569 1
Clostridium_botulinum_H04402_065 1
Clostridium_botulinum_F_str._230613 0
Clostridium_botulinum_F_str._Langeland 0
Clostridium_botulinum_E3_str._Alaska_E43 0
Clostridium_botulinum_B1_str._Okra 0
Clostridium_botulinum_Ba4_str._657 0
Clostridium_botulinum_A2_str._Kyoto 0
Clostridium_botulinum_A3_str._Loch_Maree 0
Clostridium_botulinum_A_str._Hall 0
Clostridium_botulinum_A_str._ATCC_19397 0
Clostridium_acetobutylicum_DSM_1731 0
Clostridium_acetobutylicum_EA_2018 0
Lactobacillus_salivarius_UCC118 0
Lactobacillus_reuteri_JCM_1112 0
Lactobacillus_plantarum_16 1
Lactobacillus_plantarum_ZJ316 1
Lactobacillus_plantarum_subsp._plantarum_ST-III 1
Lactobacillus_plantarum_subsp._plantarum_P-8 1
Lactobacillus_plantarum_WCFS1 1
Lactobacillus_brevis_KB290 0
Pediococcus_pentosaceus_SL4 0
Lactococcus_lactis_subsp._cremoris_KW2 0
Streptococcus_constellatus_subsp._pharyngis_C1050 1
Streptococcus_constellatus_subsp._pharyngis_C818 1
Streptococcus_constellatus_subsp._pharyngis_C232 1
Streptococcus_intermedius_B196 1
Streptococcus_intermedius_C270 1
Streptococcus_anginosus_C238 1
Streptococcus_anginosus_C1051 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 1
Streptococcus_lutetiensis_033 1
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 1
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 1
Streptococcus_equi_subsp._zooepidemicus 1
Streptococcus_dysgalactiae_subsp._equisimilis_167 1
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 1
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 1
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 1
Streptococcus_oligofermentans_AS_1.3089 1
Streptococcus_iniae_SF1 1
Streptococcus_parasanguinis_FW213 0
Streptococcus_pyogenes_HSC5 1
Streptococcus_pyogenes_A20 1
Streptococcus_pyogenes_MGAS1882 1
Streptococcus_pyogenes_MGAS15252 1
Streptococcus_pyogenes_Alab49 1
Streptococcus_pyogenes_MGAS10750 1
Streptococcus_pyogenes_MGAS10270 1
Streptococcus_pyogenes_MGAS2096 1
Streptococcus_pyogenes_MGAS9429 1
Streptococcus_pyogenes_MGAS6180 1
Streptococcus_pyogenes_NZ131 1
Streptococcus_pyogenes_MGAS8232 1
Streptococcus_pyogenes_MGAS10394 1
Streptococcus_pyogenes_MGAS315 1
Streptococcus_pyogenes_SSI-1 1
Streptococcus_pyogenes_M1_476 1
Streptococcus_pyogenes_MGAS5005 1
Streptococcus_pyogenes_M1_GAS 1
Streptococcus_pneumoniae_A026 1
Streptococcus_pneumoniae_ST556 1
Streptococcus_pneumoniae_SPNA45 1
Streptococcus_pneumoniae_SPN994039 1
Streptococcus_pneumoniae_SPN994038 1
Streptococcus_pneumoniae_SPN034183 1
Streptococcus_pneumoniae_SPN034156 1
Streptococcus_pneumoniae_INV104 1
Streptococcus_pneumoniae_INV200 1
Streptococcus_pneumoniae_OXC141 1
Streptococcus_pneumoniae_gamPNI0373 1
Streptococcus_pneumoniae_AP200 1
Streptococcus_pneumoniae_ATCC_700669 1
Streptococcus_pneumoniae_TCH8431/19A 1
Streptococcus_pneumoniae_CGSP14 1
Streptococcus_pneumoniae_G54 1
Streptococcus_pneumoniae_JJA 1
Streptococcus_pneumoniae_70585 1
Streptococcus_pneumoniae_Hungary19A-6 1
Streptococcus_pneumoniae_Taiwan19F-14 1
Streptococcus_pneumoniae_D39 1
Streptococcus_pneumoniae_670-6B 1
Streptococcus_pneumoniae_R6 1
Streptococcus_pneumoniae_TIGR4 1
Streptococcus_agalactiae_ILRI112 1
Streptococcus_agalactiae_ILRI005 1
Streptococcus_agalactiae_09mas018883 1
Streptococcus_agalactiae_2-22 1
Streptococcus_agalactiae_SA20-06 1
Streptococcus_agalactiae_GD201008-001 1
Streptococcus_agalactiae_NEM316 1
Streptococcus_agalactiae_2603V/R 1
Streptococcus_mutans_GS-5 1
Streptococcus_mutans_LJ23 1
Streptococcus_mutans_UA159 1
Streptococcus_thermophilus_MN-ZLW-002 1
Streptococcus_thermophilus_JIM_8232 1
Streptococcus_thermophilus_ND03 1
Streptococcus_thermophilus_CNRZ1066 1
Streptococcus_thermophilus_LMG_18311 1
Streptococcus_suis_T15 0
Streptococcus_suis_TL13 0
Streptococcus_suis_SC070731 0
Streptococcus_suis_S735 0
Streptococcus_suis_ST3 0
Streptococcus_suis_D9 0
Streptococcus_suis_SS12 0
Streptococcus_suis_D12 0
Streptococcus_suis_ST1 0
Streptococcus_suis_A7 0
Streptococcus_suis_JS14 0
Streptococcus_suis_BM407 0
Streptococcus_suis_SC84 0
Streptococcus_suis_GZ1 0
Streptococcus_suis_98HAH33 0
Streptococcus_suis_05ZYH33 0
Streptococcus_salivarius_CCHSS3 1
Streptococcus_salivarius_JIM8777 1
Paenibacillus_sp._Y412MC10 0
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_mucilaginosus_K02 0
Paenibacillus_polymyxa_CR1 0
Paenibacillus_polymyxa_SC2 0
Paenibacillus_polymyxa_E681 0
Bacillus_subtilis_PY79 1
Bacillus_subtilis_QB928 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1
Bacillus_thuringiensis_serovar_chinensis_CT-43 0
Bacillus_thuringiensis_YBT-1518 0
Bacillus_thuringiensis_Bt407 0
Bacillus_thuringiensis_serovar_konkukian_str._97-27 1
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 1
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 0
Bacillus_cereus_biovar_anthracis_str._CI 0
Bacillus_cereus_AH820 0
Bacillus_cereus_B4264 0
Bacillus_cereus_G9842 0
Bacillus_cereus_F837/76 0
Bacillus_cereus_E33L 0
Bacillus_cereus_ATCC_14579 1
Bacillus_anthracis_str._H9401 0
Bacillus_anthracis_str._CDC_684 0
Bacillus_anthracis_str._'Ames_Ancestor' 0
Bacillus_anthracis_str._Sterne 0
Bacillus_anthracis_str._Ames 0
Bacillus_megaterium_WSH-002 0
Bacillus_megaterium_QM_B1551 0
Staphylococcus_aureus_subsp._aureus_MSHR1132 0
Staphylococcus_pasteuri_SP1 0
Staphylococcus_lugdunensis_N920143 0
Staphylococcus_warneri_SG1 0
Staphylococcus_aureus_CA-347 0
Staphylococcus_aureus_M1 0
Staphylococcus_aureus_subsp._aureus_COL 0
Echinicola_vietnamensis_DSM_17526 0
Emticicia_oligotrophica_DSM_17448 2
Prevotella_sp._oral_taxon_299_str._F0039 0
Prevotella_dentalis_DSM_3688 0
Alistipes_shahii_WAL_8301 0
Bacteroides_xylanisolvens_XB1A 0
Bacteroides_fragilis_638R 0
Bacteroides_fragilis_NCTC_9343 0
Nonlabens_dokdonensis_DSW-6 2
Psychroflexus_torquis_ATCC_700755 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Chlamydia_pecorum_P787 0
Chlamydia_pecorum_W73 0
Chlamydia_pecorum_PV3056/3 0
Chlamydophila_pneumoniae_LPCoLN 0
Chlamydophila_pneumoniae_J138 0
Chlamydophila_pneumoniae_CWL029 0
Chlamydophila_pneumoniae_AR39 0
Chlamydia_psittaci_01DC12 0
Chlamydia_psittaci_WC 0
Chlamydia_psittaci_M56 0
Chlamydia_psittaci_WS/RT/E30 0
Chlamydia_psittaci_VS225 0
Chlamydia_psittaci_MN 0
Chlamydia_psittaci_GR9 0
Chlamydia_psittaci_84/55 0
Chlamydia_psittaci_08DC60 0
Chlamydia_psittaci_02DC15 0
Chlamydia_psittaci_C19/98 0
Chlamydia_psittaci_NJ1 0
Chlamydia_psittaci_CP3 0
Chlamydophila_psittaci_RD1 0
Chlamydia_psittaci_Mat116 0
Chlamydophila_psittaci_6BC 0
Chlamydophila_psittaci_6BC 0
Chlamydia_trachomatis_C/TW-3 0
Chlamydia_trachomatis_L2/434/Bu(f) 0
Chlamydia_trachomatis_L2/434/Bu(i) 0
Chlamydia_trachomatis_IU888 0
Chlamydia_trachomatis_IU824 0
Chlamydia_trachomatis_L2b/Canada2 0
Chlamydia_trachomatis_L2b/Canada1 0
Chlamydia_trachomatis_L3/404/LN 0
Chlamydia_trachomatis_L2b/Ams5 0
Chlamydia_trachomatis_L2b/Ams4 0
Chlamydia_trachomatis_L2b/Ams3 0
Chlamydia_trachomatis_L2b/Ams2 0
Chlamydia_trachomatis_L2b/Ams1 0
Chlamydia_trachomatis_L2b/795 0
Chlamydia_trachomatis_L2b/CV204 0
Chlamydia_trachomatis_L2b/LST 0
Chlamydia_trachomatis_L2b/UCH-2 0
Chlamydia_trachomatis_L2b/8200/07 0
Chlamydia_trachomatis_L2/25667R 0
Chlamydia_trachomatis_L1/224 0
Chlamydia_trachomatis_L1/115 0
Chlamydia_trachomatis_L1/440/LN 0
Chlamydia_trachomatis_K/SotonK1 0
Chlamydia_trachomatis_Ia/SotonIa3 0
Chlamydia_trachomatis_Ia/SotonIa1 0
Chlamydia_trachomatis_G/SotonG1 0
Chlamydia_trachomatis_F/SotonF3 0
Chlamydia_trachomatis_F/SW5 0
Chlamydia_trachomatis_F/SW4 0
Chlamydia_trachomatis_E/SotonE8 0
Chlamydia_trachomatis_E/SotonE4 0
Chlamydia_trachomatis_E/SW3 0
Chlamydia_trachomatis_D/SotonD6 0
Chlamydia_trachomatis_D/SotonD5 0
Chlamydia_trachomatis_D/SotonD1 0
Chlamydia_trachomatis_A/5291 0
Chlamydia_trachomatis_A/363 0
Chlamydia_trachomatis_RC-J/971 0
Chlamydia_trachomatis_RC-L2/55 0
Chlamydia_trachomatis_J/6276tet1 0
Chlamydia_trachomatis_RC-J/966 0
Chlamydia_trachomatis_RC-J(s)/122 0
Chlamydia_trachomatis_RC-F(s)/342 0
Chlamydia_trachomatis_RC-L2(s)/3 0
Chlamydia_trachomatis_RC-J/953 0
Chlamydia_trachomatis_RC-J943 0
Chlamydia_trachomatis_RC-Fs852 0
Chlamydia_trachomatis_RC-L2s46 0
Chlamydia_trachomatis_RC-F69 0
Chlamydia_trachomatis_L2c 0
Chlamydia_trachomatis_D-LC 0
Chlamydia_trachomatis_D-EC 0
Chlamydia_trachomatis_G/9301 0
Chlamydia_trachomatis_G/11074 0
Chlamydia_trachomatis_G/11222 0
Chlamydia_trachomatis_G/9768 0
Chlamydia_trachomatis_E/150 0
Chlamydia_trachomatis_E/11023 0
Chlamydia_trachomatis_B/TZ1A828/OT 0
Chlamydia_trachomatis_Sweden2 0
Chlamydia_trachomatis_E/Bour 0
Chlamydia_trachomatis_A2497 0
Chlamydia_trachomatis_A2497 0
Chlamydia_trachomatis_L2b/UCH-1/proctitis 0
Chlamydia_trachomatis_434/Bu 0
Chlamydia_trachomatis_A/HAR-13 0
Chlamydia_trachomatis_D/UW-3/CX 0
Singulisphaera_acidiphila_DSM_18658 0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 0
Leptospira_interrogans_serovar_Lai_str._56601 3
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 4
Brachyspira_pilosicoli_WesB 0
Treponema_pedis_str._T_A4 1
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 6
Fusobacterium_nucleatum_subsp._animalis_4_8 4
Campylobacter_jejuni_subsp._jejuni_00-2544 0
Campylobacter_jejuni_subsp._jejuni_00-2538 0
Campylobacter_jejuni_subsp._jejuni_00-2426 0
Campylobacter_jejuni_subsp._jejuni_00-2425 0
Campylobacter_jejuni_subsp._jejuni_PT14 0
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 0
Campylobacter_jejuni_subsp._jejuni_IA3902 0
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 0
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 0
Helicobacter_pylori_35A 0
Desulfocapsa_sulfexigens_DSM_10523 1
Desulfobacula_toluolica_Tol2 0
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 0
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 1
Geobacter_sp._M18 0
Sorangium_cellulosum_So0157-2 0
Anaeromyxobacter_sp._K 1
Anaeromyxobacter_dehalogenans_2CP-C 1
Myxococcus_stipitatus_DSM_14675 1
Neisseria_meningitidis_WUE_2594 1
Neisseria_meningitidis_G2136 1
Neisseria_meningitidis_M04-240196 1
Neisseria_meningitidis_M01-240149 1
Neisseria_meningitidis_NZ-05/33 1
Neisseria_meningitidis_M01-240355 1
Neisseria_meningitidis_8013 0
Neisseria_meningitidis_053442 1
Neisseria_meningitidis_Z2491 1
Neisseria_meningitidis_H44/76 1
Neisseria_meningitidis_alpha710 1
Neisseria_meningitidis_MC58 1
Neisseria_gonorrhoeae_TCDC-NG08107 2
Neisseria_gonorrhoeae_FA_1090 2
Pandoraea_pnomenusa_3kgm 0
Ralstonia_solanacearum_FQY_4 0
Burkholderia_thailandensis_MSMB121 1
Burkholderia_pseudomallei_NCTC_13179 0
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 0
Variovorax_paradoxus_B4 2
Variovorax_paradoxus_EPS 0
Bordetella_parapertussis_Bpp5 0
Bordetella_bronchiseptica_MO149 0
Bordetella_bronchiseptica_253 0
Phaeobacter_gallaeciensis_DSM_17395 0
Phaeobacter_gallaeciensis_DSM_26640 0
Leisingera_methylohalidivorans_DSM_14336 0
Octadecabacter_antarcticus_307 0
Octadecabacter_arcticus_238 0
Rhodobacter_sphaeroides_KD131 0
Rhodobacter_sphaeroides_ATCC_17025 0
Rhodobacter_sphaeroides_2.4.1 0
Paracoccus_aminophilus_JCM_7686 0
Candidatus_Pelagibacter_ubique_HTCC1062 1
Sinorhizobium_meliloti_GR4 0
Sinorhizobium_meliloti_Rm41 0
Sinorhizobium_meliloti_SM11 0
Sinorhizobium_meliloti_BL225C 0
Sinorhizobium_meliloti_1021 0
Bradyrhizobium_sp._BTAi1 1
Simiduia_agarivorans_SA1_=_DSM_21679 2
Haemophilus_somnus_2336 1
Aeromonas_hydrophila_ML09-119 0
Vibrio_fischeri_ES114 1
Idiomarina_loihiensis_GSL_199 0
Shewanella_sp._W3-18-1 0
Shewanella_sp._ANA-3 0
Shewanella_baltica_BA175 0
Shewanella_baltica_OS678 0
Shewanella_baltica_OS117 0
Shewanella_baltica_OS223 0
Shewanella_baltica_OS195 0
Shewanella_baltica_OS155 0
Shewanella_sp._MR-7 0
Shewanella_putrefaciens_200 0
Glaciecola_psychrophila_170 0
Alcanivorax_dieselolei_B5 0
Thioalkalivibrio_nitratireducens_DSM_14787 0
Coxiella_burnetii_CbuK_Q154 0
Coxiella_burnetii_CbuG_Q212 0
Coxiella_burnetii_RSA_493 0
Legionella_pneumophila_2300/99_Alcoy 0
Yersinia_pseudotuberculosis_PB1/+ 0
Yersinia_pseudotuberculosis_YPIII 0
Yersinia_pseudotuberculosis_IP_32953 0
Yersinia_pestis_biovar_Microtus_str._91001 0
Yersinia_pestis_A1122 0
Yersinia_pestis_Z176003 0
Yersinia_pestis_D182038 0
Yersinia_pestis_D106004 0
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 0
Yersinia_pestis_Nepal516 0
Yersinia_pestis_Antiqua 0
Yersinia_pestis_Angola 0
Yersinia_pestis_CO92 0
Yersinia_pestis_KIM10+ 0
Serratia_marcescens_FGI94 0
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 0
Shigella_sonnei_53G 0
Shigella_flexneri_2002017 0
Shigella_flexneri_2a_str._2457T 0
Shigella_flexneri_2a_str._301 0
Salmonella_bongori_N268-08 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 0
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 0
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 0
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 0
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 0
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 0
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 0
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 0
Salmonella_enterica_serovar_Bovismorbificans_genomics 0
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 0
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 0
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 0
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 0
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 0
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 0
Escherichia_coli_JJ1886 0
Escherichia_coli_SMS-3-5 0
Enterobacter_cloacae_EcWSU1 0
Azotobacter_vinelandii_CA6 1
Azotobacter_vinelandii_CA 1
Pseudomonas_denitrificans_ATCC_13867 1
Pseudomonas_syringae_pv._phaseolicola_1448A 0
Pseudomonas_syringae_pv._syringae_B728a 0
Pseudomonas_stutzeri_CCUG_29243 0
Pseudomonas_stutzeri_DSM_10701 0
Pseudomonas_stutzeri_DSM_4166 0
Pseudomonas_stutzeri_RCH2 0
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 0
Pseudomonas_monteilii_SB3101 0
Pseudomonas_monteilii_SB3078 0
Pseudomonas_putida_H8234 0
Pseudomonas_putida_HB3267 0
Pseudomonas_putida_NBRC_14164 0
Pseudomonas_putida_DOT-T1E 0
Pseudomonas_putida_S16 0
Pseudomonas_putida_BIRD-1 0
Pseudomonas_putida_W619 0
Pseudomonas_putida_ND6 0
Pseudomonas_putida_KT2440 0
Pseudomonas_putida_GB-1 0
Pseudomonas_protegens_CHA0 0
Pseudomonas_poae_RE*1-1-14 0
Pseudomonas_fluorescens_F113 1
Pseudomonas_fluorescens_A506 0
Pseudomonas_fluorescens_R124 1
Pseudomonas_fluorescens_Pf0-1 1
Pseudomonas_resinovorans_NBRC_106553 0
Pseudomonas_mendocina_NK-01 1
Pseudomonas_aeruginosa_SCV20265 1
Pseudomonas_aeruginosa_MTB-1 1
Pseudomonas_aeruginosa_LES431 1
Pseudomonas_aeruginosa_RP73 1
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_PA1R 1
Pseudomonas_aeruginosa_PA1 1
Pseudomonas_aeruginosa_DK2 1
Pseudomonas_aeruginosa_NCGM2.S1 1
Pseudomonas_aeruginosa_M18 1
Pseudomonas_aeruginosa_LESB58 1
Pseudomonas_aeruginosa_PA7 1
Pseudomonas_aeruginosa_PAO1 1
Acinetobacter_baumannii__ATCC_19606 0
Acinetobacter_lwoffii__SH145 0
Cycloclasticus_zancles_7-ME 1
Sulfolobus_islandicus_Y.G.57.14 0
Methanomethylovorans_hollandica_DSM_15978 0
Methanolobus_psychrophilus_R15 0
Archaeoglobus_sulfaticallidus_PM70-1 0
Candidatus_Methanomethylophilus_alvus_Mx1201 0
Ferroplasma_acidarmanus_fer1 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   2
Pan_troglodytes_69_2.1.4   (Chimpanzee)   2
Gorilla_gorilla_69_3.1   (Western gorilla)   2
Pongo_abelii_69_2   (Sumatran orangutan)   3
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   2
Macaca_mulatta_69_1   (Rhesus monkey)   4
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   2
Otolemur_garnettii_69_3   (Small-eared galago)   3
Microcebus_murinus_69_1   (Gray mouse lemur)   2
Rattus_norvegicus_69_3.4   (Norway rat)   2
Mus_musculus_69_38   (House mouse)   3
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   3
Cavia_porcellus_69_3   (Domestic guinea pig)   3
Oryctolagus_cuniculus_69_2   (Rabbit)   3
Ochotona_princeps_69   (American pika)   3
Tupaia_belangeri_69   (Northern tree shrew)   2
Sus_scrofa_69_10.2   (Pig)   3
Bos_taurus_69_3.1   (Cattle)   3
Vicugna_pacos_69_1   (Alpaca)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   2
Mustela_putorius_furo_69_1.0   (Domestic ferret)   2
Ailuropoda_melanoleuca_69_1   (Giant panda)   2
Canis_familiaris_69_3.1   (Dog)   1
Felis_catus_69   (Domestic cat)   1
Equus_caballus_69_2   (Horse)   3
Myotis_lucifugus_69_2.0   (Little brown bat)   4
Pteropus_vampyrus_69_1   (Large flying fox)   2
Sorex_araneus_69_1   (European shrew)   2
Erinaceus_europaeus_69   (Western European hedgehog)   1
Procavia_capensis_69_1   (Cape rock hyrax)   1
Loxodonta_africana_69_3   (African savanna elephant)   2
Echinops_telfairi_69   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   3
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1
Macropus_eugenii_69_1.0   (Tammar wallaby)   3
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   2
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   3
Ornithorhynchus_anatinus_69_5   (Platypus)   6
Petromyzon_marinus_69_7.0   (Sea lamprey)   3
Meleagris_gallopavo_69_2   (Turkey)   2
Gallus_gallus_69_2   (Chicken)   3
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   5
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   2
Anolis_carolinensis_69_2.0   (Green anole)   3
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_69_1   (Coelacanth)   3
Gadus_morhua_69_1   (Atlantic cod)   5
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   7
Takifugu_rubripes_69_4   (Torafugu)   6
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   2
Oryzias_latipes_69_1   (Japanese medaka)   2
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   4
Oreochromis_niloticus_69_1.0   (Nile tilapia)   3
Danio_rerio_69_9   (Zebrafish)   3
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_69   (Vase tunicate)   2
Drosophila_melanogaster_69_5   (Fruit fly)   0
Caenorhabditis_elegans_69_215   (Roundworm)   0
Arabidopsis_thaliana_10   (Thale cress)   0

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   15
Homo_sapiens__(NCBI_version)   (Human)   5
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   3
Heliconius_numata__(Incomplete) 0
Loa_loa_v3.3_(Request)   (Eye worm)   0
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   0
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   0
Moniliophthora_perniciosa_FA553__(Genome_survey) 0
Encephalitozoon_intestinalis__(endoparasite) 0
Encephalitozoon_cuniculi_(endoparasite) 0
Lotus_japonicus__(Early_assembly) 3
Malus_x_domestica_(Duplicate)   (Apple)   0
Ricinus_communis__(Early_assembly)   (Castor bean)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 2
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1
Phoenix_dactylifera__(Early_draft)   (Date palm)   5
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 0
NCBI_plasmid_sequences_(Plasmids) 1
TargetDB__(Targets) 18
Protein_Data_Bank_(all_PDB_sequenc) 0
PDB_chains_(SCOP_1.75)_(PDB) 0
NCBI_viral_sequences_(Viral) 15
Protozoadb_2010_08_(Protozoadb) 38
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 72
STRING_v9.0.5_(STRING) 278
UniProt__viral_sequences_(Viral) 5
Uniprot_2018_03_genome 5832
NCBI_2017_08_genome 20615

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.