Domain combinations for 82671,49854,49854,57424,57424,57424,50494 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

82671 - SEA domain
49854 - Spermadhesin, CUB domain
49854 - Spermadhesin, CUB domain
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
50494 - Trypsin-like serine proteases

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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• All genomes
• All eukaryote genomes (domain E)
• All bacterial genomes (domain B+A)
• All eubacterial genomes (domain B)
• All archaeal genomes (domain A)

Groups of genomes may be slower than individual genomes.

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Strains

Genome		Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)	(Tropical clawed frog)	0

Longest transcript per gene

Genome		Number
Homo_sapiens_69_37	(Human)	0
Pan_troglodytes_69_2.1.4	(Chimpanzee)	1
Gorilla_gorilla_69_3.1	(Western gorilla)	0
Nomascus_leucogenys_69_1.0	(Northern white-cheeked gibbon)	0
Macaca_mulatta_69_1	(Rhesus monkey)	0
Callithrix_jacchus_69_3.2.1	(White-tufted-ear marmoset)	0
Otolemur_garnettii_69_3	(Small-eared galago)	0
Rattus_norvegicus_69_3.4	(Norway rat)	0
Mus_musculus_69_38	(House mouse)	0
Ictidomys_tridecemlineatus_69_2	(Thirteen-lined ground squirrel)	0
Cavia_porcellus_69_3	(Domestic guinea pig)	0
Sus_scrofa_69_10.2	(Pig)	0
Bos_taurus_69_3.1	(Cattle)	0
Tursiops_truncatus_69_1	(Bottlenose dolphin)	0
Ailuropoda_melanoleuca_69_1	(Giant panda)	0
Canis_familiaris_69_3.1	(Dog)	0
Equus_caballus_69_2	(Horse)	0
Myotis_lucifugus_69_2.0	(Little brown bat)	0
Pteropus_vampyrus_69_1	(Large flying fox)	0
Macropus_eugenii_69_1.0	(Tammar wallaby)	0
Meleagris_gallopavo_69_2	(Turkey)	0
Gallus_gallus_69_2	(Chicken)	0
Taeniopygia_guttata_69_3.2.4	(Zebra finch)	0
Pelodiscus_sinensis_69_1.0	(Chinese soft-shelled turtle)	0
Anolis_carolinensis_69_2.0	(Green anole)	0
Xenopus_tropicalis_69_4.2	(Tropical clawed frog)	1
Latimeria_chalumnae_69_1	(Coelacanth)	0
Tetraodon_nigroviridis_69_8	(Spotted green pufferfish)	0
Takifugu_rubripes_69_4	(Torafugu)	0
Gasterosteus_aculeatus_69_1	(Three-spined stickleback)	0
Oryzias_latipes_69_1	(Japanese medaka)	0
Xiphophorus_maculatus_69_4.4.2	(Southern platyfish)	1
Oreochromis_niloticus_69_1.0	(Nile tilapia)	0

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Others

Genome		Number
Homo_sapiens_75_37_(old_version_GRC)	(Human)	1
Homo_sapiens__(NCBI_version)	(Human)	1
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)	(House mouse)	0
TargetDB__(Targets)		0
STRING_v9.0.5_(STRING)		1
Uniprot_2018_03_genome		816
NCBI_2017_08_genome		94

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