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Domain combinations for 82671,57424,50494,_gap_,50494,_gap_,50494 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

82671 - SEA domain
57424 - LDL receptor-like module
50494 - Trypsin-like serine proteases
50494 - Trypsin-like serine proteases
50494 - Trypsin-like serine proteases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Otolemur_garnettii_76_3   (Small-eared galago)   1
Mus_musculus_76_38   (House mouse)   1
Bos_taurus_76_3.1   (Cattle)   1
Ovis_aries_76_3.1   (Sheep)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Canis_familiaris_76_3.1   (Dog)   1
Myotis_lucifugus_76_2.0   (Little brown bat)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Meleagris_gallopavo_76_2   (Turkey)   1
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1

Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   1

Longest transcript per gene
Genome     Number
Otolemur_garnettii_69_3   (Small-eared galago)   1
Rattus_norvegicus_69_3.4   (Norway rat)   1
Mus_musculus_69_38   (House mouse)   1
Bos_taurus_69_3.1   (Cattle)   1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Canis_familiaris_69_3.1   (Dog)   1
Myotis_lucifugus_69_2.0   (Little brown bat)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Meleagris_gallopavo_69_2   (Turkey)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1

Others
Genome     Number
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 308
NCBI_2017_08_genome 40

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