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Domain combinations for _gap_,100895,56487,57424,57424,50494 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

100895 - Kazal-type serine protease inhibitors
56487 - SRCR-like
57424 - LDL receptor-like module
57424 - LDL receptor-like module
50494 - Trypsin-like serine proteases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   3
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Papio_anubis_76   (Olive baboon)   1
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   1
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Mus_musculus_76_38   (House mouse)   1
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Sus_scrofa_76_10.2   (Pig)   2
Bos_taurus_76_3.1   (Cattle)   1
Ovis_aries_76_3.1   (Sheep)   2
Vicugna_pacos_76_1   (Alpaca)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Canis_familiaris_76_3.1   (Dog)   1
Felis_catus_76_6.2   (Domestic cat)   1
Pteropus_vampyrus_76_1   (Large flying fox)   1
Loxodonta_africana_76_3   (African savanna elephant)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1
Macropus_eugenii_76_1.0   (Tammar wallaby)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_76_5   (Platypus)   1
Meleagris_gallopavo_76_2   (Turkey)   1
Gallus_gallus_76_4   (Chicken)   1
Anas_platyrhynchos_76_1.0   (Mallard)   1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   1
Anolis_carolinensis_76_2.0   (Green anole)   2
Lepisosteus_oculatus_76   (Spotted gar)   2
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1
Poecilia_formosa_76   (Amazon molly)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Rattus_norvegicus_69_3.4   (Norway rat)   1
Mus_musculus_69_38   (House mouse)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Sus_scrofa_69_10.2   (Pig)   1
Bos_taurus_69_3.1   (Cattle)   1
Vicugna_pacos_69_1   (Alpaca)   1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Canis_familiaris_69_3.1   (Dog)   1
Pteropus_vampyrus_69_1   (Large flying fox)   1
Loxodonta_africana_69_3   (African savanna elephant)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1
Macropus_eugenii_69_1.0   (Tammar wallaby)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_69_5   (Platypus)   1
Meleagris_gallopavo_69_2   (Turkey)   1
Anolis_carolinensis_69_2.0   (Green anole)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   3
Homo_sapiens__(NCBI_version)   (Human)   1
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
STRING_v9.0.5_(STRING) 10
TargetDB__(Targets) 1
Uniprot_2018_03_genome 2580
NCBI_2017_08_genome 292

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