SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,101288,50156,_gap_,50044,52540 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

101288 - L27 domain
50156 - PDZ domain-like
50044 - SH3-domain
52540 - P-loop containing nucleoside triphosphate hydrolases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Tupaia_belangeri_76   (Northern tree shrew)   0
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1
Danio_rerio_76_9   (Zebrafish)   0
Lucilia_cuprina   (Australian sheep blowfly)   1

Longest transcript per gene
Genome     Number
Tupaia_belangeri_69   (Northern tree shrew)   0
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1
Danio_rerio_69_9   (Zebrafish)   0

Others
Genome     Number
Uniprot_2018_03_genome 220
NCBI_2017_08_genome 16

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